Sfus012668.1
Basic Information
- Insect
- Sylvicola fuscatus
- Gene Symbol
- Rel
- Assembly
- GCA_026546915.1
- Location
- JANSTS010007179.1:23484-28470[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.4e-49 1.6e-45 154.8 0.8 1 168 23 208 23 209 0.94 2 3 1 3.6e+03 -2.6 0.1 45 67 568 591 567 651 0.65 3 3 1.2 4.4e+03 -2.8 0.2 61 89 688 716 670 767 0.63
Sequence Information
- Coding Sequence
- ATGACGTCGACGTTACTCGACTTGGATACCTATCAGATGCAAGGCTATAATGACCACAAGCCCACATTAGTCATTACACAGCAGCCAGTGGATAAATTTCGGTTCCGGTATAAATCAGAGATGCACGGTACACATGGCTCGTTGATGGGATCACGCACGGAAAAGTCGAAGAAGACTTTTCCTTCAGTGGAGCTGAAAAACTTTAATGGAACCGCAATGATTCGATGCTCCCTGTATCAAACGGAACGAAATAAGCTAAGCCCATCCCAGCACTCGCACAGATTGGTCGTACGCTCAGGTGACACTGACAAAAACGATCCTCACACCGTGATTGTGTCACCATCAGAAGGATACACTGCTGTTTTCCAAGGAATGGGAATCATTCACACGGCTAAGAAGAACATAACACAAGAGCTGATAAATAAAAAACGAGAAGAGGCCATGTTTGAAAAGGGATCAGAATTAACAGAGCGCGAATCTGCACGGATACGACAGAGTGCCGAAAATGAAGCCAAAACCATGAATCTGAATCAAGTGTGTCTCTGCTTTCAAGCGTATTTCCAAGATGCAAATATGATGTGGAGACCTCTGTGCGATAAAGTCTTTTCCAATTCAATAAACAACATGAAAAGTGCATTGACGGGTGAGCTGAAGATAACTCGTCTAAGTGCGGCCACGAGCTGTGCATCCGGTGGAATGGATCTATTTCTGTTTGTTGAGAAGGTCGGCAAGAAGAATATCAAGGTACGGTTCTTTGAAGTCGACGAGAATGAAGAATGCGTTTGGGAGGACTGGGGACGTTTCACCGAAGCAGATGTCCATCATCAGTATGGAATAGCTCTACAAACGCCGGCCTACAAGGACAAAGACATCGAAAAGCATGTTGACGTGTTTATCCAATTAGTTAGGCCGAGTGACAATGATCGCAGTGAACCGATGCAGTTCAAGTACAAGCCACGAACGTATATGGACTCACGAAAACGGAGGCGAACTGATTCAACGTTTAACTCAGCTGAGATTCCAACGGTGTTGCAAAACATTTACTCGCCGCAATCCGAATTCAGTCAACTTCATCAAACCACCATTAGTGATGAGTACAATACCAGTGGTTTACTGAACGATATCATATCCAGTGATCTATTCAGAGTTCACGTGGAGAGAAACTCAGAAGAGCTGAGGGAATTGATAGATTGCGACATTACTATGGCGACATTGGAGACTGATGGAGGAAGCAGCACCTTGGCCACGCCAACAAGTGTCATTAAAAGTGGACCAAATGCTCCACCGATCAACCAGTTGCTGTCAAATGAAGCCATTCTAAAGAAAGTAATGGCAATCACACGAACGTATCGCGATGATCCGCAAAATGTAAGGCGTCTTATCGTCGAATTGTTAAAGCATCACAATGAAGATGGTGATAATATTTTGCATTCATCAATTCGGGAGGGAGACAGTAGTACAGTGCAGCCGTTACTTAAAATTATCCATCAATTTGATTTGGGAGAAGTTTTACAATATAGAAATATCGCAAAGGAGACGTGTCTTCATGTCGCCTGCCATTATGATAAACCCGAATATATTCGTCCTCTGATTAATTTGGGTGCTGACCCAAATTTGCCTGACATCAATGGGAACACTCCTCTTCACGTTGCAGTAGAATTAAACTACTTGATGTGTGCCTCGAGAATACTGGACGAAAAGAATTACACAGAAAAAAGTAAAAAACTACAAATAAATTTAGCAAATGACGATGGTCAGACAGCAATTCATCGAGCTGTGAAGCTGAAGAATTTCGCAATGACACAAAAGCTACTGGAGATGGGACACGCGTCGGTTAAAGTGGCTGAAACGAAAACAGGAAATAACATTTTACACATCGCAGTACAAGAAAACGCTGTTGAAATTGTCAAATACATTCTGGATAAAACATCGATCGACGTAAATGCTGAAAATAATTCGGGATACCCTCCGCTGCTGTTGGCATCTGGGTCTAGTGAACCAGAAGCAAAGGCAATTGTGACACTGCTATTGGATCACAATGCAGATCTCAAACAAACGCAGTATCAGCATTCGAGTAAACATCACAATCTAACAAAAGAAGATGAGGACGACGAAGAAAATGAGGTTCAGCTGCCAAAGAGTTCCTTTGAAATGGCTAGACATAATCCAGATATATTAAACTTGCTTAAGGACCATGCCGGCGCTATGCACATCAAAACAGAAAACATGGATTTCGAGAGTGAAACAATATCCAGAGAACGGGTAACTATTTTTGATGATGAATGCATTAAAAAACTGCGTGCGCTCTTTAATAGCAATGACCGCTGGAAAAAATTAGCTACGAAATTGAATCATCCGACTTACATTACAGATTTAAAATCAAATCCCACAGACATTTTATTAAATACTATTCAGATGCAGCAGCTGTCTAACGATGAACTTACGCAACTTTTTGAAAACATCGATGAGAGTGAAGCTCTGCTGGTGATCAATGAAATGATTGATCGCCAAAAATGTTAG
- Protein Sequence
- MTSTLLDLDTYQMQGYNDHKPTLVITQQPVDKFRFRYKSEMHGTHGSLMGSRTEKSKKTFPSVELKNFNGTAMIRCSLYQTERNKLSPSQHSHRLVVRSGDTDKNDPHTVIVSPSEGYTAVFQGMGIIHTAKKNITQELINKKREEAMFEKGSELTERESARIRQSAENEAKTMNLNQVCLCFQAYFQDANMMWRPLCDKVFSNSINNMKSALTGELKITRLSAATSCASGGMDLFLFVEKVGKKNIKVRFFEVDENEECVWEDWGRFTEADVHHQYGIALQTPAYKDKDIEKHVDVFIQLVRPSDNDRSEPMQFKYKPRTYMDSRKRRRTDSTFNSAEIPTVLQNIYSPQSEFSQLHQTTISDEYNTSGLLNDIISSDLFRVHVERNSEELRELIDCDITMATLETDGGSSTLATPTSVIKSGPNAPPINQLLSNEAILKKVMAITRTYRDDPQNVRRLIVELLKHHNEDGDNILHSSIREGDSSTVQPLLKIIHQFDLGEVLQYRNIAKETCLHVACHYDKPEYIRPLINLGADPNLPDINGNTPLHVAVELNYLMCASRILDEKNYTEKSKKLQINLANDDGQTAIHRAVKLKNFAMTQKLLEMGHASVKVAETKTGNNILHIAVQENAVEIVKYILDKTSIDVNAENNSGYPPLLLASGSSEPEAKAIVTLLLDHNADLKQTQYQHSSKHHNLTKEDEDDEENEVQLPKSSFEMARHNPDILNLLKDHAGAMHIKTENMDFESETISRERVTIFDDECIKKLRALFNSNDRWKKLATKLNHPTYITDLKSNPTDILLNTIQMQQLSNDELTQLFENIDESEALLVINEMIDRQKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -