Scin003912.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sylvicola cinctus
Gene Symbol
Tcjhe
Assembly
GCA_963854165.1
Location
OY974082.1:49969729-49976391[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8e-36 8.5e-33 113.4 0.1 5 168 593 771 589 772 0.91
2 2 2.2 6.5e+03 -3.3 0.0 31 53 1037 1058 1032 1068 0.70

Sequence Information

Coding Sequence
ATGGTTGGCGTACAATTAGCATGGGTTCTTTTCCTTCTGCACACAGCTGTGTGTCACAGTCCAGAAGTTTGCATTAACAGCGGTTGCATTCGTGGCACGAGAATGTCTGGTATAAATTCTGGAGATTTTGAAGCATTTTTCGGCATTCCTTACGCTCAACCGCCCATCGGTGCATTACGGTTTTCTaatccATTACCTGAGAAAAATTGGTCTCATTTTTTAGATGCTACTAAACCAAAGTCAGACTGCAtacaaaaaaactatttaataccAAATCCAACCGTAAGTGGTAGCGAAGACTGCCTGTACTTAAATGTGTACCGACaaaagGATATTAAAAAGGGCATCCTCCTACCAGTTATGGTTTACATACATGGTGGGGGATTTTTCTCCGGCTCAATATCACCAGGAATTCATGGGCCGGAATACTTTATGGACAAAAAGGGTGTCATTTTAGTAATGATGGCGTACCGACTAGGGGCAATGgGATTTATGTCCACAAATGACTCATCATGCCCAGGAAACTTTGGCTTAAAAGATCAAGTTCTTGCGCTAAAATGGGTTCAAGCAAATATTGAGGAATTTGGGGGTGATAAAAGTCAAGTGACTATTTTTGGTCAAAGTGCTGGTGGTGCTTCCGTTCATATGCACATGCTCAGCGAAGCTTCTAAtggTCTTTTCCATCGTGCTATTGCAATGAGCGGAAATGCAATCGCACCATACAATGAACCCACCAAAGATCCTTTAGATCTAGCTAGGCGACAAGCTGAATTTGTGGGAATTAAAAACGCCTCATCCCTTACTACAAAGGACTTAATTGCTAAATTACGAACTGTGAGCGCTTCAAAGATAGTCGACAGCGGTGATTATTTGCACCACTGGGATGTTGACCCCTTGGTAACATTCCGGATTGTTGTGGAACCAAAAGGTAATGGCGCTTTTTTAACGGAACATCCGTTGTCCATTTTAAAAAGCGGTAAATATGAAAAAGTGCCATGGATGACGGGTGTTGTTCCTGTTGAAGGTGCTGTCAGAGCAGCTGcAATCGTCTCAAACAAAACTCTATTGAAGGACTTCAATGAACAACTTGAtgatttattgccaaaattaATGGAGATTGAATACGACACAAAAGAAGGAAAGCAAATGCTTTTGAGTGAACTtcggaattattatttaaatggatcaattgaattgaatgaaaataataaacatggATTTATAAAAATGTTCACGGATCGAGCATTCCTGCATCCACTTCAGAAGACACTTGAAATATATAACGATGGTGGGAATTCCACAGACCCAcctgtttatttttacaaattcaacTATCGTGGAAACTTTTCTTACTCAATTTTGTTTACGGGCACTCTTGATAATTTTGGAATTGTCCATTGTGATGATTTGTTGTACTTGTTTCGAACACCATTGATATTTAAGGACTTCCAAGAAGGATCAACTGATGAAGAAATGAGCAAACTCATGGTTTCAACGTACATAAATTTTGCCTACGGTCGGGATCCTCATTATTCTGGGAGTATGGTGCCATGTACAGGACCCACCCAAGATGCATTTTGTACATACATGGAGATGACATCGGTTAATAACACAGCGGTTATAGTTTACAATAATCAGTCGATATACGATCAGAAAGCGGAAAATATGTGGAATGACCTAATCTTGTACAATCAGTTGTTTCCTCATGAATCTCTGCGACAACAATTTCTGCAACAAAATACCTCATTTGATCCAAgacCATACATGATAGTCAGACAGCAACCCATTGATAAATTCAGATTTCGTTACAAATCTGAAATGCATGTGCTACACGGATCCTTAATTGGCTCACGACTGGATAAATCCCCAACAGTGGAGCTTCGAAATTACAATGGAAGTGCTATGATTCGCTGCTCATTGTATCAGACTGTCCAAAATAATGAGCCCCCATGCCCGCATCCTCACAGATTGGTTATGAAATGCGCCAGTGGTAGAGACAAACTTGATCCCCACGTAGTGATGTTATCGCAATCAACAGGATACACCGCAACGTTTCCTGGCATGGGTGTAATGCATACGGCAAAGAAGCAAGTTTTGCAAGAGCTATTGAGTAAACGACTTGAGGAGGAAGAATTTGAAAAAGGTTCACACCTAAGCGTATTGGAATACAACAGTATAAGTCAAGATACTGAAAATAAAGCGCAAGCCATAAACTTGAATCAGGTTTGTTTGTGCTTTAAAGCATACACTCAAAATGCCAACGGAAAATGGATGCCATTGTGTGAAAACGTCTTCACGAATCCCATAAATAACATGAAAAGTTCATTGACTGGAGACTTAAAAATAACGCGAATCAGTTCAGTGGTCAGTGATGTGGAGGGTGCTGatgaaatattcatatttGTGGAAAAGATTGGAAAGCAGAATATACGTGTGCGTTTCTTTGAAATGGACAACAGCAATCGCTTGGTGTGGGAGGCTTGGGGTAACTTCAGCAAAACAGATGTCCATCATCAGTACGGCATTATATTCCAGACACCACCGTACCGAAATAGAAACATAACGAGTCCTGtgaatgtttttattcaattggtGAGGCCCAGTGATGGTGGTTGCAGTGAAGCGTTGCCATTTAAATACAAGCCCAGCATCACTAATACAATCCCAGCAGATATTTCTATTGACGGCGCATATTCAACTGACTTAAGATACAAAACAATGATTAGTCACAATGAGATTAACATCGAGGAGCACTTTGGGTATCCTGCATTGTGCTTCAAGCACATTGATGATTTAATGTACGAGCATAATATTGGTGGGTGGGAGCTTCATTGGGCGATACGAAAGGGTGACAGCGAAATGGTGCATGATCTGCTTAAGCTTATTGAAGAGCACCATCACGTTGATCTGCTTGATATCAAAAACAGTTTGGGTGAAACGTGCCTGCATGTTGCCTGTCGCTTTGATAAACCGAAATTTATTCATCGATTAATTCGTTGTGGTGCAAATCCCAATGCATTAAACAAAACAGGAGACACCCCATTACATTATGCAGTTAATCTTTGCAATACCACGCAATGTCTTTCGAATATTTTAGATGGCTCCAATTACACTCAAAAtagtaaatcaattaaaatcgatttaaagAATTATGACGGCCAATCGGTGATTCATGACGCTGTGCGtcttaaaaaattacccatgataaaaaagttattagAAGATGGACACGCGTCTGTGAATCTTGCAGAAACAAGAACGGGCaataacattttgcacattgcAGTGCAAGCAAATGCAACCGATATAGTGCAATACATTTTGGAGAATACAACGGTTGACGTTGCTGCAGAAAACAGTTCAGGATATTCACCATATCAGTTGGCGTGCAACTCAAATAGCAATGCGGCGAAAAATATTCTTGATCTTATTATGAAACACAGTGGTGGAATGCAATCTGATTTACAGGAAagtgacaacattttttatgatattttgacgtttctttaa
Protein Sequence
MVGVQLAWVLFLLHTAVCHSPEVCINSGCIRGTRMSGINSGDFEAFFGIPYAQPPIGALRFSNPLPEKNWSHFLDATKPKSDCIQKNYLIPNPTVSGSEDCLYLNVYRQKDIKKGILLPVMVYIHGGGFFSGSISPGIHGPEYFMDKKGVILVMMAYRLGAMGFMSTNDSSCPGNFGLKDQVLALKWVQANIEEFGGDKSQVTIFGQSAGGASVHMHMLSEASNGLFHRAIAMSGNAIAPYNEPTKDPLDLARRQAEFVGIKNASSLTTKDLIAKLRTVSASKIVDSGDYLHHWDVDPLVTFRIVVEPKGNGAFLTEHPLSILKSGKYEKVPWMTGVVPVEGAVRAAAIVSNKTLLKDFNEQLDDLLPKLMEIEYDTKEGKQMLLSELRNYYLNGSIELNENNKHGFIKMFTDRAFLHPLQKTLEIYNDGGNSTDPPVYFYKFNYRGNFSYSILFTGTLDNFGIVHCDDLLYLFRTPLIFKDFQEGSTDEEMSKLMVSTYINFAYGRDPHYSGSMVPCTGPTQDAFCTYMEMTSVNNTAVIVYNNQSIYDQKAENMWNDLILYNQLFPHESLRQQFLQQNTSFDPRPYMIVRQQPIDKFRFRYKSEMHVLHGSLIGSRLDKSPTVELRNYNGSAMIRCSLYQTVQNNEPPCPHPHRLVMKCASGRDKLDPHVVMLSQSTGYTATFPGMGVMHTAKKQVLQELLSKRLEEEEFEKGSHLSVLEYNSISQDTENKAQAINLNQVCLCFKAYTQNANGKWMPLCENVFTNPINNMKSSLTGDLKITRISSVVSDVEGADEIFIFVEKIGKQNIRVRFFEMDNSNRLVWEAWGNFSKTDVHHQYGIIFQTPPYRNRNITSPVNVFIQLVRPSDGGCSEALPFKYKPSITNTIPADISIDGAYSTDLRYKTMISHNEINIEEHFGYPALCFKHIDDLMYEHNIGGWELHWAIRKGDSEMVHDLLKLIEEHHHVDLLDIKNSLGETCLHVACRFDKPKFIHRLIRCGANPNALNKTGDTPLHYAVNLCNTTQCLSNILDGSNYTQNSKSIKIDLKNYDGQSVIHDAVRLKKLPMIKKLLEDGHASVNLAETRTGNNILHIAVQANATDIVQYILENTTVDVAAENSSGYSPYQLACNSNSNAAKNILDLIMKHSGGMQSDLQESDNIFYDILTFL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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