Scin003914.1
Basic Information
- Insect
- Sylvicola cinctus
- Gene Symbol
- Rel
- Assembly
- GCA_963854165.1
- Location
- OY974082.1:49980920-49987311[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-49 6.2e-46 156.2 1.2 1 168 26 211 26 212 0.94 2 2 0.8 2.4e+03 -1.9 0.1 45 121 586 668 584 678 0.69
Sequence Information
- Coding Sequence
- ATGGAGCCAACGTACCTTGATTTGGATGCTTACCAAAACAATATGAACCCGCCACCaaatgACATTAGACCAAAGTTAGTCATCACACAGCAGCCAGTTGATAAGTTTCGGTTTCGATACAAGTCGGAAATGCACGGCACCCACGGCTCATTGATGGGATCGCGGACagaaaaatcaaagaaaactttcCCCACAGTTGAgctaaaaaatttcaatgggACTGCCATGATACGATGCTCTCTGTATCAAACCGACACAAATAAACTTAGCTCTTCCCAGCATTCCCACAGATTAGTGGTGCGGTCAGGCGATACTGACAAAAATGATCCTCACCATGTTATTGTTTCACCAACAGACGGATATATTGCCGTtttccAAGGAATGGGAATCATTCATACGGCAAAAAAGAATATCATCCAAGAATTGATCAACAAAAAACGTGAGGAAGCGTTGTTCGAGAAGGGTTCTGAACTAACAGAACGCGAATCCGCACGCATACGTCAAACCGCTGAAAATGAAGCCAAATCAATGAACCTGAATCAGGTGTGCCTTTGTTTCCAAGCCTATTACCAAGATGTGAACATGATGTGGAAACCTCTTTGCGAAAAAGTCTGTTCTAATCCCATTAATAACATGAAAAGTGCTTTAACTGGTGAACTTAAAATAACGCGCCTTAGTGCAGCCACAAGCTGTGCATCCGGTGGaatggatttgtttttgtttgtagaAAAAGTGggcaagaaaaatattaaagtgcgTTTCTTTGAGTTGGatgaaaatgatgaattgTATTGGGAGGATTGGGGGCATTTCACTGAAGCCGATGTTCATCACCAGTATGGAATTGCGTTACAAACGCCGCCATACAAAAACAAGGACATTGAGAAGCACGTTGATGTGTTTATTCAGTTAGTGCGACCCAGTGACAACGATCGTAGTGAGCCAATGCACTTTAAGTACAAGCCACGCACCTATATGGACTCACGAAAACGCCGACGCACCgattcaacatttaattcgGCAGAAATTCCAACcgttttgcaaaatattggtTTTCGGCAGCAGGGCAATGATTACGGTCAGGGCACAACGATAAGTGAGGAGTACAATGCTAGTGGATTAATCAATGCCATCATGTCGGAAGATTTGTTTAGAGCCCAAGTGGAGCACAACTCGGACGAACTTATGCAATACATTGATTGCGATTTGAATGCATCCGGATTAGACAACAGTTTAAATCAATCCATATTGGGCAACACATCCACATTGGAGACAGACGGGGGTGGTGGCGGTAGAATTGCTACACCTACAAGTGTAATCAAAAGCGGGCCGAATGCACCACCAATTGGAAACTCGACCAATGAGACAATTGTGAAAAAGATAATGGCAATTACTCGAACCTATCGAGATGATcccaacaaaataaagtttctCATCACCGATGTCCTTAAGCGTTTCGACCAAGATGGAGATAACATTTTGCATTCTGCTATTAGGGATGGGGAGAGTAATACTGTGCAGCCGTtgcttaaaataatcaatcaatttgatttagGATCTGTTCTGCAGTTAGGCAATATTCGACAAGAAACGTGTCTGCATGTTGCTTGCCGTTACGATAAACCGGAATACATCCGTCCTCTTATTAATTTGGGTGCTGATCCAAATTTACCTGACATTGCCGGTAACACGCCACTTCATATTGCCGTGGAATTGGGATACTTGATGTGCGCCTCCAGGATTTTagacaaacaaaattacaccACAAAGAGTATACAACTGAACATTAATTTGGCGAATGACGACGGTCAGACGGCAATACATCGTgcagttaaattgaaaaattttggtATGACACAAAAGTTATTGGAAATGGGACAGGCGTCGGTGAAAGTGGCTGAAACAAAAACGggcaataatattttgcatattggCGTACAAGAGAATGATGTTGATATTGTCAAATACATTCTGGAAAAGACCACCATCGATGTGAATGCAGAGAATAACTCAGGATACTCTGCACTGTTGTTGGCATGCAGTTCCAGTGTGCCAGAGGCAACATCAATTGTTAAGCTGTTGTTGGAGCATAATGCTGATCTCAAACAAACGCAACATCAGCATTCACAAATTCGTCGCACTTTAACGAAAGACGAAGAAGATGATGAGGAGGATGATATTCAGAAGCCCAAATGTTCTTTCGAAATGGCAAGGCATAATCCTGTTATTTTGGCgcttttaaaagACTCTGCtggattaaaacaaataaaaaccgaGGTTATGGATGTGGATAATGAGCCGATCTCTGGAGATCAGGTGattatttttgatgatgaGTGCTTTGATAAACTATGTGTGCTTTTGAACAAAAGTGATTGCTGGAAAAAATTAGCTGGAATACTCAAATGCTCATCTTTCGTTACAGATATAAAATCGAATCCAACCCAGACATTGCTCAACATTATTGAGATGCAACGGATGAACATTGAGGAAGTgatacaattatttgaatcAATTACCGAAGATAAAGCAATACTCATTGTTAATGAGATGATTGCACGAAAAAGTATAAAAGCTTGA
- Protein Sequence
- MEPTYLDLDAYQNNMNPPPNDIRPKLVITQQPVDKFRFRYKSEMHGTHGSLMGSRTEKSKKTFPTVELKNFNGTAMIRCSLYQTDTNKLSSSQHSHRLVVRSGDTDKNDPHHVIVSPTDGYIAVFQGMGIIHTAKKNIIQELINKKREEALFEKGSELTERESARIRQTAENEAKSMNLNQVCLCFQAYYQDVNMMWKPLCEKVCSNPINNMKSALTGELKITRLSAATSCASGGMDLFLFVEKVGKKNIKVRFFELDENDELYWEDWGHFTEADVHHQYGIALQTPPYKNKDIEKHVDVFIQLVRPSDNDRSEPMHFKYKPRTYMDSRKRRRTDSTFNSAEIPTVLQNIGFRQQGNDYGQGTTISEEYNASGLINAIMSEDLFRAQVEHNSDELMQYIDCDLNASGLDNSLNQSILGNTSTLETDGGGGGRIATPTSVIKSGPNAPPIGNSTNETIVKKIMAITRTYRDDPNKIKFLITDVLKRFDQDGDNILHSAIRDGESNTVQPLLKIINQFDLGSVLQLGNIRQETCLHVACRYDKPEYIRPLINLGADPNLPDIAGNTPLHIAVELGYLMCASRILDKQNYTTKSIQLNINLANDDGQTAIHRAVKLKNFGMTQKLLEMGQASVKVAETKTGNNILHIGVQENDVDIVKYILEKTTIDVNAENNSGYSALLLACSSSVPEATSIVKLLLEHNADLKQTQHQHSQIRRTLTKDEEDDEEDDIQKPKCSFEMARHNPVILALLKDSAGLKQIKTEVMDVDNEPISGDQVIIFDDECFDKLCVLLNKSDCWKKLAGILKCSSFVTDIKSNPTQTLLNIIEMQRMNIEEVIQLFESITEDKAILIVNEMIARKSIKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -