Scin005119.1
Basic Information
- Insect
- Sylvicola cinctus
- Gene Symbol
- Su(H)
- Assembly
- GCA_963854165.1
- Location
- OY974082.1:65331688-65334520[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-68 1.6e-64 215.3 0.0 1 123 244 366 244 366 0.99
Sequence Information
- Coding Sequence
- ATGCCGCACCAATACGGCCTAACGGGTTTCGCCCAAACACCACCTAGCCCGCCCATCACAAATCACGGTGCTCTTATGCCTCGTATAGGAGGCGGTGGTGCTGTAATTCCGGGCTCCCAAGGCAGCGCAATGACCACTCCGGTTAATGCTACCAATTCCATAAGTGGCGGACATTATAGGCCTCAGATTGAGGACAAACGCCTCACTAGAGACGCCATGGAACGATATATGACTGAACGAAATGATATGGTTATTGTTATACTTCACGCAAAGgtAGCACAGAAATCTTACGGCAATGAAAAACGTTTCTTCTGTCCGCCACcgtgcatttatttgtttggcaATGGCTGGCGACACCGACAAGAAGAGATGCTACGTAAGGGTGAAAGTGAACAGGGTGCTCAATTATGTGCTTTTATTGGTATTGGCAACTCTGACCAGGATATGCAACCTCTGGATCTTAACAATGGAAAACAGTATtgcgcagccaaaactttataCATTTCTGACTCGGACAAACGAAAGCATTTTATGTTGTCGGTTAAAATGTTCTACGGCAATGGCCACGACATTGGTCTTTTTAATTCCAAACGAATAAAAGTCATTTCGAAGCCCTCCAAGAAAAAACAGTCACTGAAAAACGCCGATCTTTGCATTGCCAGCGGAACTAACGTTGCCCTATTCAATCGGTTACGATCGCAAACGGTTAGCACGCGATACCTTCATGTTGAGAACGGTAACTTCCATGCCAGTTCAACGCAATGGGGTGCTTTTACAATACATTTGCTAGATGACAATGAGAGTGAGTCTGAAGAGTTCCAGgtcCGCGATGGTTACATTCATTACGGATCCACAGTGAAATTAGTTTGTTCCGTAACTGGAATGGCATTGCCACGACTAATCATTCGAAAAGTCGACAAACAAATGGCGTTACTAGAAGCTGATGATCCTGTGTCACAGTTGCATAAGTGTGCATTCTACATGAAAGACTCTGAGCGCATGTATCTCTGTCTGTCACAAGAGaaaatcattcaatttcaGGCAACGCCATGTCCCAAGGACTCCAACAAAGAGATGATTAATGATGGCGCATGCTGGACAATCATCTCAACCGATAAGGCTGAATATCAGTTCTATGAAGGCATGGGACCAGTACGAACACCAGTGACGCCTGTTCCCATCGTAAATtcgttgaatttaaatggtgGCGGTGATGTGGCAATGTTGGAACTTACAGGTGATAATTTTACGCCACAACTGCAAGTATGGTTTGGTGATGTTGAGGCAGAGACAATGTACCGATGTGCAGAAGCTTTGCTCTGCGTTGTTCCAGATATTTCGCAATTTCGAGGCGAATGGTTGTGGGTACGACAACCAACTCAAGTGCCAATTTCGTTGGTGCGCAACGATGGTATCATATATGCCACTGGTTTGACGTTCACATACACACCGGAACCTGGTCCCAGGCCACATTGTGGACCCGCAGACGATGTAATGCGCCACCGTCACgccaacaacaataacacttcaaatgcaaataacaataatagtaACAACACTGGCAACAATAATCCTTCAGACAACAGCAACTCGTCCACAGGAGGTGGTGGCACCCTGCCATCGATATCGGATGTGCCGTGGAATTCACACGGTGGTCTGTAG
- Protein Sequence
- MPHQYGLTGFAQTPPSPPITNHGALMPRIGGGGAVIPGSQGSAMTTPVNATNSISGGHYRPQIEDKRLTRDAMERYMTERNDMVIVILHAKVAQKSYGNEKRFFCPPPCIYLFGNGWRHRQEEMLRKGESEQGAQLCAFIGIGNSDQDMQPLDLNNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGNGHDIGLFNSKRIKVISKPSKKKQSLKNADLCIASGTNVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDNESESEEFQVRDGYIHYGSTVKLVCSVTGMALPRLIIRKVDKQMALLEADDPVSQLHKCAFYMKDSERMYLCLSQEKIIQFQATPCPKDSNKEMINDGACWTIISTDKAEYQFYEGMGPVRTPVTPVPIVNSLNLNGGGDVAMLELTGDNFTPQLQVWFGDVEAETMYRCAEALLCVVPDISQFRGEWLWVRQPTQVPISLVRNDGIIYATGLTFTYTPEPGPRPHCGPADDVMRHRHANNNNTSNANNNNSNNTGNNNPSDNSNSSTGGGGTLPSISDVPWNSHGGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00440008;
- 90% Identity
- iTF_01087750;
- 80% Identity
- -