Stex005420.1
Basic Information
- Insect
- Sycophila texana
- Gene Symbol
- Zmiz1
- Assembly
- GCA_035582955.1
- Location
- JAWWEN010000038.1:4531665-4538256[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.05 8e+02 0.7 0.8 5 24 540 559 536 564 0.91 2 2 7.3e-26 1.2e-21 77.0 4.2 1 50 619 668 619 668 0.98
Sequence Information
- Coding Sequence
- ATGGCGCACCAAACGTATAACACCATGGGCTATAACCAGCGGGGCCCGATGGGGGGCATGGCCGGCCCTATGGGCATGAACAACTACGCGGGCATGGGCACGGTCAACCCGATGATGTCCTCCATGAATTCGATGAACTCGATGAACGGCATGGGCAACGTTAACCCCATGAACCCGATGATGATGGGGAGTGGCGTCAGTAACATGAACGGCATGAGCGGAATGACGCCCATGAACCCAATGAGTAACATGAACAATATGGGAATGATGAGCGGCGGCATGGGCACCGCCGCTGTTCCCATGAACAAAATGACCATGCAGCAGCAGACTCAGCAGGCGTACGCAAGGCGAATGGGACCCTACCCGAATCCGGCGATGCACGTAGCGCAAAAGCGCATGCAGCAGCAGCCCCCGCCGCAGCAGCAAGTCCCCTACGGCGCGGCCGGTCCCAACCCAAACGGCATGCCGCACGCGGCCTACGGCGGCATGACCGCCGCCCAGCAGTACCCCAACGGTTACGCGAGCGCCGCCAGCCGACCCAACGCCTTCCAAgcccagcagcagcaacagcagcagcaacagcagcagcaacaacagcaacagcagcaccagctgcagcagcagcagcagtaccAGCAGCACCAGGCTGCCAGTATGGCCGCCTCGCAGATGAACCCGGCGGCGATGTCGGCGACGGGCTACCCCGgagcggcgacggcggcgatGATGCGGGGCGCCGGCGGTGTCAGGCAGCAGCAgccccagcagcagcagcagccgtcGATGGGTCCCGGCTACGGAGCCGTGCCCAACCAGGCTAGTCAGTACTACAGCGGTCAGCTGGCGTCGGCGGGCGTCGGTCCCACCCCCGGGAACATCAACGTCAACGTCAACGTCAACCTCATGAACCCCCACCACCACGGCGCTCTGCCCtcgccgcagcagcagcaacagcagcagcaacaacagcagcagcagcaacagcaacagcagcagcaacagcagagCATCCCCCAGGGCAACCCCATGACCGGCGCGCAGTACCACTCGGcccagcaacagcagcagccgcagccCGGAAACCCCGGCGTCTACGGACAGGGCGCCTCGCCCTACGGCGTCAGCAACGGCCAGTACCAGCCGGACTCGCCCATGAGGTCGGCCCTCGGAGTCCAGCCGATCGGCAACATGAGCTATCAGCACAGTCCGATACCCGGCAACCCGACCCCACCGCTCACCCCGGCCGGCAGCATGCCGCCCTACGTCAGCCCCAGCTCGGACGGCAAGCACGGCTTCAGCGACATCAAACCCATGATGCCAAaAGAGGACGATCTGAGACTAACATTCCCCGTGAGGGACGGCATGATCCTCGCGCCGTTCCGTCTGGAGCACAATCTGGCTGTGAGCAACCACGCATTCCAACTGAAGTCCACGGTGCACCAGACGTTGATGATGCGACCGGACCTCGAGCTCGAGCTCAAGTGCTTCCACCACGAGGACAAACAGAGGAACACGAACTGGCCGCAGAGCGTCCAAATATCGGTGAACGCGACGCCCCTGATCATCGACCGGGGCGAGAACAAGTCCTCCCACAAGCCCCTGTACCTCAAGGACATCTGCCAAGCCGGTCGCAACACCATCCAGATCACCGTGTCCGCCTGCTGTTGTTCGCATCTGTTCATCCTACAATTGGTCCACCGGCCGACCGTGCAGAGCGTGCTGCAGGGGCTGTTGCGCAAGCGGCTCCTCACGGCGGAGCACGGCGTGTCGAAGATAAAGAGAAATTTCAACAACACTCTGCCTAGCAGCGGAATACCCACGGAGAAGGACGTCGTCGAGCAGACATCGATAAAGGTGTCGCTCAAGTGTCCCATAACGTTTAAGCGAATCTCTCTACCGGCAAGGGGCCAAGACTGCAAGCACATACAGTGCTTCGATCTGGAGTCGTACTTGCAGCTCAACTGCGAGCGAGGAAACTGGAGGTGTCCAGTCTGCACTAAACCAGCGCAGTTGGAAGGACTGGAGGTGGACCAGTACATGTGGGGAATCTTAAACAGCACGAGCTCGGACGTGGACGAGGTAACGATAGACTCTTCGGCAAACTGGAAGCCGAAGAAGACCGAGGAAGACAGCGAGTGCAAGCGTATGACGAAGGCCATGTCGCCCGGCAGCATGAACATGCCGACGATGAACAGCTGGATGGACGCGAACCAGGCGATGAGCCCGTACATGCCGCCCGACATGAACAGCATCGTCAGCGGCTCGATGATGAACGGCTCGACgacgcagcagcagcagcagcagcaacagcaacagcagcagcaacaacaacagcagcagcagcaacagcagcagcaacaacagcagcaacagcaggcGTACGCTAACCAGGCTGGACACCGAGCCCCCGGCACGCCGTCGTCGACGGCCGTCTCCCAGTCGAGCAACGTCTCCACGAATATGAGCGGCATGGGCACCCCCGACATGTCCATGAGCGGCAACCCCGGCCAGAACGACTACCCCGGCTCGGGACCGCTCTCCCACCTCAACGACCACACCAACTCCCTCGACCATCTCAGTGCCATCGACAAGTCACTAAGCGATCAGATGCCCCACACGCCGCACACGCCTCACACGccaggcggcggcggcggaaaTAGCGGCCCCCCGAGCGTCGCGCCCTCCGTCTCCCAGGACACCAGCGGCAACAACCTCAACACCTCGACGGGCAGCGGCGTACCCGGAGTCACGGACACCTCCGACATCATCGCCTCCGACCTGAACTTCGACCCCGCGGCCGTCATCGACGGTGACGCCGGCCAAGAGGCCCTCAACcTCTTACCAGACCAAGTAGACCCGATGGAGTTGCTGTCGTACTTGGACCCGCCGGACCTGAACACACCACCCAGCAGCGGCGCAAGCAGCGGCAACCCTCCATCGAACGACGACATCCTCGCCCTCTTCGAGTAA
- Protein Sequence
- MAHQTYNTMGYNQRGPMGGMAGPMGMNNYAGMGTVNPMMSSMNSMNSMNGMGNVNPMNPMMMGSGVSNMNGMSGMTPMNPMSNMNNMGMMSGGMGTAAVPMNKMTMQQQTQQAYARRMGPYPNPAMHVAQKRMQQQPPPQQQVPYGAAGPNPNGMPHAAYGGMTAAQQYPNGYASAASRPNAFQAQQQQQQQQQQQQQQQQQHQLQQQQQYQQHQAASMAASQMNPAAMSATGYPGAATAAMMRGAGGVRQQQPQQQQQPSMGPGYGAVPNQASQYYSGQLASAGVGPTPGNINVNVNVNLMNPHHHGALPSPQQQQQQQQQQQQQQQQQQQQQQSIPQGNPMTGAQYHSAQQQQQPQPGNPGVYGQGASPYGVSNGQYQPDSPMRSALGVQPIGNMSYQHSPIPGNPTPPLTPAGSMPPYVSPSSDGKHGFSDIKPMMPKEDDLRLTFPVRDGMILAPFRLEHNLAVSNHAFQLKSTVHQTLMMRPDLELELKCFHHEDKQRNTNWPQSVQISVNATPLIIDRGENKSSHKPLYLKDICQAGRNTIQITVSACCCSHLFILQLVHRPTVQSVLQGLLRKRLLTAEHGVSKIKRNFNNTLPSSGIPTEKDVVEQTSIKVSLKCPITFKRISLPARGQDCKHIQCFDLESYLQLNCERGNWRCPVCTKPAQLEGLEVDQYMWGILNSTSSDVDEVTIDSSANWKPKKTEEDSECKRMTKAMSPGSMNMPTMNSWMDANQAMSPYMPPDMNSIVSGSMMNGSTTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAYANQAGHRAPGTPSSTAVSQSSNVSTNMSGMGTPDMSMSGNPGQNDYPGSGPLSHLNDHTNSLDHLSAIDKSLSDQMPHTPHTPHTPGGGGGNSGPPSVAPSVSQDTSGNNLNTSTGSGVPGVTDTSDIIASDLNFDPAAVIDGDAGQEALNLLPDQVDPMELLSYLDPPDLNTPPSSGASSGNPPSNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00714067;
- 90% Identity
- iTF_00714846;
- 80% Identity
- -