Basic Information

Gene Symbol
Zmiz1_1
Assembly
GCA_900475205.1
Location
UXGB01001797.1:20351-28771[-]

Transcription Factor Domain

TF Family
zf-MIZ
Domain
zf-MIZ domain
PFAM
PF02891
TF Group
Zinc-Coordinating Group
Description
This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.52 5.2e+03 -2.0 0.3 11 24 437 450 434 454 0.87
2 2 4.1e-25 4.1e-21 75.2 4.6 2 50 516 564 515 564 0.96

Sequence Information

Coding Sequence
ATGGGACCCTACCCAAACCCGGCGATGCACGTAGCGCAAAAGCGCATGCAGCAGCAGCCCCCGCCGCAGCAGCAAGTCCCCTACGGTGCGGCCGGCCCCAACCCAACCGGCATGCCGCACGCGGCCTATGGCGGCATGACCGCCGCCCAGCAGTACCCGAACGGTTACGCGAGCGCCGCTGCTCGACCCAATGCCTTCCAagcccagcagcagcagcaacagcagcaacagcaacaacagcagcaacaacagcagcagcagcaccagctgcaacagcaacaacagcagtaCCAACAGATTCAAGCTGCCAGTATGGCGTCACAGATGAATCCTGCTGCGATGTCGGCGACGGGCTACCCCGGAGCCGCGTCTGCTGGGATGATGCGGGGCGCCGGCAGTGTCAGACAGCAGCAgccccagcagcagcagcagcagcagcagccgtcGATGGGCCCCGGCTACGGTGCTGTGCCCAACCAGGCTAGTCAGTACTACAGCGGCCAGCTGACGTCGACGGGCGTCGCCCCCAGCCCCGGCAACATCAACGTGAACGTCAACGTCAACCTGATGAACCCCCATCACCACGGGGCCCTGCCGACGccgcaacagcagcaacagcagcagcagcaacagcaacagcagcagcagaatATCCCCCAGGGCAACCCCATGCCCATGGGTGGCTCTCAGTACCACTCGGcccagcagcaacaacagccgcaacagccgcagcagcagcagcagcagctgccCGGTAACCCCGGCGTCTACGGTCAGGTCTCCTCGCCTTACGGCGTCAACAACGGACAGTACCAGCCGGACTCACCCATGAGGTCGGCCCTCGGAGTCCAGCCGATAGGCAACATGAGCTATCAGCACAGTCCGATACCCGGCAACCCGACTCCACCGCTCACCCCGGCCGGCAGCATGACGCCCTACGTCAGCCCCAGCTCGGACGGCAAGCACGGCTTCAACGACATCAAGCCCTTGATGCCAAAGGACCAACTGAGACTAACATTCCCCGTGAGGGACGGCATGATCATGGCGCCGTTCCGTCTGGAGCACAACTTGTCTGTGAGCAATCACGCATTCCAACTGACGCCCGACGTGCACGAGGCGCTGATGAAGCGGACGGACCTCGAGCTCGAGCTCAAGTGCTTCCACCACGACGACAAGCATAGGAACACGAACTGGCCGCAGAGCGTCCAGATCTCGGTGAACATGACGCCCCTGATCATCGACCGGGGCGATAACAATTCCTCTCACAAGCCCCTGTACCTCAAGGACATCTACCAGGCCGGGCGCAACACCATCCAGATCACCGTCTCCGCCTGCTGTTGTTCGCATCTATTCATCGTGCAATTGGTCCACCGACCGACCGTACAGAGCGTACTGCAGGGTCTGTTGCAAAAACGGCTTCTCACCGCGGAGCATGGCGTATCGAAGATAAAGCGAAACTTCAACAACACTCTTCCCAGCAACGGAATACCTACAGAGAAGGACGTCGTTGAGCAGACGTCGATTAAGCCACTCTTTTCGCAGGTGCCGCTCAAGTGTCCCATAACGTTCAAGCGTATCTCTCTACCGGCAAGGGGCCAAGAGTGCAGGCACATACAGTGCTTCGATCTGGAATCGTTCTTGCAGCTCAACTGCGAGCGAGGAAATTGGAAGTGTCCAGTTTGCAAAAAACCAGCAATGCTGGAAGGCCTGGAGGTAGACCAGTACATGTGGGGAATCCTGAACAGCACGAGCTCGGACATGGACGAGGTAACGATAGACTCGTCGGCGAACTGGAAGCCGAAGAAGGCCGAGGAGGACAGCGAGTGCAAGCGCATGACGAAGGCCATGTCGCCGGGCAGCATGAACATGCCGACGATGAACAGCTGGATGGACGCGCACCAGGCGATGAGCCCGTACATGCCGCCCGACATGAACAGCATTGTGAGCGGCTCGCCCATGAACGGCTCGACGActcagcagcaacagcagcagcagaagcagcagcagcagcaacagcagcaacagcaggcCTACGGTGGCCAGGCCGGCCATCGGGGCCCCGGCACGCCGTCGTCCACGGCCGTCTCCCAGCCCAGCAACGTCTCCACGAACATGACCGGCATGGGCACCCCCGACATGTCCATGAGCGGCAACCCCGGCCAGAACGACTACCCCGGCACGGGTCCGCTCTCGCACCTCAACGACCACACCAACTCCCTCGACCATCTCAGTGCCATCGACAAGTCACTAAGCGATCAGATGCCCCACACGCCGCACACGCCTCACACGccaggcggcggcggcggaaaTAGCGGCCCCCCGAGCGTCGCGCCCTCCGTCTCCCAGGACACCAGCGGCAACAACCTCAACACCTCGACGGGCAGCGGCGTACCCGGAGTCACGGACACCTCCGACATCATCGCCTCCGACCTGAACTTTGACCCCGCGGCCGTCATCGACGGCGACGCCGGCCAAGAGGCCCTCAACCTCTTGCCAGACCAAGTGGACCCGATGGAGTTGCTGTCGTACTTGGACCCGCCGGACCTGAACACACCGCCCAGCAGCGGCGCGAGCAGCGGCAACCCGCCGTCGAACGACGACATCCTCGCCCTCTTCGAGTAA
Protein Sequence
MGPYPNPAMHVAQKRMQQQPPPQQQVPYGAAGPNPTGMPHAAYGGMTAAQQYPNGYASAAARPNAFQAQQQQQQQQQQQQQQQQQQQHQLQQQQQQYQQIQAASMASQMNPAAMSATGYPGAASAGMMRGAGSVRQQQPQQQQQQQQPSMGPGYGAVPNQASQYYSGQLTSTGVAPSPGNINVNVNVNLMNPHHHGALPTPQQQQQQQQQQQQQQQNIPQGNPMPMGGSQYHSAQQQQQPQQPQQQQQQLPGNPGVYGQVSSPYGVNNGQYQPDSPMRSALGVQPIGNMSYQHSPIPGNPTPPLTPAGSMTPYVSPSSDGKHGFNDIKPLMPKDQLRLTFPVRDGMIMAPFRLEHNLSVSNHAFQLTPDVHEALMKRTDLELELKCFHHDDKHRNTNWPQSVQISVNMTPLIIDRGDNNSSHKPLYLKDIYQAGRNTIQITVSACCCSHLFIVQLVHRPTVQSVLQGLLQKRLLTAEHGVSKIKRNFNNTLPSNGIPTEKDVVEQTSIKPLFSQVPLKCPITFKRISLPARGQECRHIQCFDLESFLQLNCERGNWKCPVCKKPAMLEGLEVDQYMWGILNSTSSDMDEVTIDSSANWKPKKAEEDSECKRMTKAMSPGSMNMPTMNSWMDAHQAMSPYMPPDMNSIVSGSPMNGSTTQQQQQQQKQQQQQQQQQQAYGGQAGHRGPGTPSSTAVSQPSNVSTNMTGMGTPDMSMSGNPGQNDYPGTGPLSHLNDHTNSLDHLSAIDKSLSDQMPHTPHTPHTPGGGGGNSGPPSVAPSVSQDTSGNNLNTSTGSGVPGVTDTSDIIASDLNFDPAAVIDGDAGQEALNLLPDQVDPMELLSYLDPPDLNTPPSSGASSGNPPSNDDILALFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00714846;
80% Identity
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