Stex006128.2
Basic Information
- Insect
- Sycophila texana
- Gene Symbol
- pnr
- Assembly
- GCA_035582955.1
- Location
- JAWWEN010000038.1:16536570-16549972[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1 8.3e+03 -2.7 0.1 7 12 183 188 173 190 0.56 2 3 2.3 9.3e+03 -2.8 0.0 5 14 213 222 213 226 0.82 3 3 1e-16 4.2e-13 49.5 5.1 1 35 380 413 380 414 0.98
Sequence Information
- Coding Sequence
- ATGCAGTCATTAATCATTCTCCTCACTCTTACTTTAGTACATTGTCAGCTGGCAATATCTGAAAAGGACAAGAGTAACAACAGCACTGCCAAACTGGAGGCCGACATAAGCTCCCTGCACTCGTCGTACCACGAGCTGAACAAGACGGTGTTCGCCGAGGGCCCGAACTCGCCGGCGTCGATAAACCAGTACCTGCTGCCGGGTCACACGCGTACCCACCACTTGGAGCAGTCGTCGCTGCACTCGATGGACAGGTCGAGCAGCCAGCACCAGGATGAGGCTCtcgccgacgacgacgcgaTCTCGAACGACTCGGATCCGGACCGACTGGAGATCGAGGATCGCGACGAGGAAGAGCCGGCCGAGAGCGAGGAGGCCGACGAGAACGGCTACGACATGAGCATGCCCGCCAAGAGGTGCAAAGTCGACAGCGGCATCGGCGAGGCGAACAGGCCCGGCAGCAGCAGCCCGAACGCCGCCAATGTCAGCCCCATAAACAGGATGGACACGCCCGAGAGCAACTGCTCCGACAGCCAGGTCGACCAGGAGACTACCAAGCTCTGGCAAGCGCTCGCAAGCAACCGTAACCTCGAGATAACGCGGACGAACGGCGACAAGCCGAAAAACGGGTTCAGCGGcgagacgacgacgacgatgctCCGCAAGTTGATCAACATGTCGGCGATGGAGCGAGTGGTTGAGGCAGCGGCGGTCGCCGCTCAAGTCGCAGGATCCGGCGCTCCTCAGGTGCGCTTCTACCGGGACACCCAAGGCGCGCAGAGCCTGGCACCCCCACCCACTGACGGACCTGTGCACGGAAACCGTACCAGCATCATCGGACGCGTCGATCATCAGAACACGTCGATGGACAGCAATCCGTCGAGTCCAGCGAGCGGTCGCAAGGAGACGAAGGGCCGGCGGAAGCAGAGTTACCCGAGCAAGGCTGCCAGTCCTGCAGACTATCCTCACAAGGAGTCCATCGAAGATCACGCTCAAGACTTCACCGCCTGGTCCAACAAAATGAAGAGCGAAAATCAGCAGATTGAGCAGAAGCCAGAGTTGGATCAGCACGGCATGGTAGTGGGCGGTAACGGAGCGAACAACGTGAACAACGCTGCCAAGAAGGTGGACATGTCGTGCACGAATTGCGGCACGATGACAACGACGATCTGGAGGCGAAACATGAAGGGCGAGATGGTCTGCAATGCTTGCGGCCTCTACTACAAGCTGCACGGGGTGAACCGACCGGTGACCATGCGACGCGACACCATACACACCCGGCGGCGCAGGCCTAAAGGCGAGAAGACCAGCAGGCACCGAAAGAAGGGTGACAATGGAAACGTAACCATTCAGCCACAGCAACAAGTTGTTAGCAGTCATCCGCCGTCACAGCCTCCATCAGATTCAATGGACCCAGAGAGCGCGGACATGCTGGCAGCGCTACGACGTCAGATCCAGCCACACCTGATTATGGCTGCGGCGATGCCGTCACAACAACCAGGACACGGTATCCCGCCGGTTCACGGCCCACCCATTGCCGCGGCGCCACTCAACTTCTCCATTCCCCTTAGTTCCTTCATGATGCATcaAGTGAAGCAAGAGGTAGATCGTCCAGACGACTACGACGAAATGGACGACGACGGTGACGAGGAGAATGTGTCGGATGTGCCGTTGAACTTGGTCGCCACATCGTTGGCCGAGGAGGCCCACTGA
- Protein Sequence
- MQSLIILLTLTLVHCQLAISEKDKSNNSTAKLEADISSLHSSYHELNKTVFAEGPNSPASINQYLLPGHTRTHHLEQSSLHSMDRSSSQHQDEALADDDAISNDSDPDRLEIEDRDEEEPAESEEADENGYDMSMPAKRCKVDSGIGEANRPGSSSPNAANVSPINRMDTPESNCSDSQVDQETTKLWQALASNRNLEITRTNGDKPKNGFSGETTTTMLRKLINMSAMERVVEAAAVAAQVAGSGAPQVRFYRDTQGAQSLAPPPTDGPVHGNRTSIIGRVDHQNTSMDSNPSSPASGRKETKGRRKQSYPSKAASPADYPHKESIEDHAQDFTAWSNKMKSENQQIEQKPELDQHGMVVGGNGANNVNNAAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKTSRHRKKGDNGNVTIQPQQQVVSSHPPSQPPSDSMDPESADMLAALRRQIQPHLIMAAAMPSQQPGHGIPPVHGPPIAAAPLNFSIPLSSFMMHQVKQEVDRPDDYDEMDDDGDEENVSDVPLNLVATSLAEEAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01381012;
- 90% Identity
- iTF_01381012;
- 80% Identity
- -