Sque000002.2
Basic Information
- Insect
- Sycophila quercilanae
- Gene Symbol
- pnr
- Assembly
- GCA_035582995.1
- Location
- JAWWEP010000001.1:5918-21849[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3 9.1e+03 -2.9 0.1 7 12 263 268 253 270 0.56 2 3 3.7 1.1e+04 -3.2 0.1 5 14 293 302 293 305 0.81 3 3 1.5e-16 4.7e-13 49.2 5.1 1 35 460 493 460 494 0.98
Sequence Information
- Coding Sequence
- ATGTTTGTAAAATCTGGTTTCATGGAgaATACCAAGCCAGTTCAGACTGGTACACCAGTTTTTATTAGAGAATTAAAATCTAGGCATTTTCCTAAAGCTGATGATATAGTCAAATGTTTAAGAGGTCAGCAGCTAACAGTCcaatatttacaaacaaatgGTTTTGAAATACCTATTATTGTGGATAATAAAGATGGTCTTGATATGATTGTACCAGCACCAAATTTTAGTTTGAATGATATTGAAAGTTTTATCGGTAGTTACAACAGTATAATGAAAGACAGAGAGCTAGAGATTAAGGTTAAGGACAAGAGTAACAACAGCACTGCCAAACTGGAGGCCGACATAAGCTCCCTGCACTCGTCGTACCACGAGCTGAACAAGACGGTGTTCGCCGAGGGCCCGAACTCGCCGGCGTCGATAAACCAGTACCTGCTGCCGGGTCACACGCGCACCCACCACTTGGAGCAGTCGTCGCTGCACTCGATGGACAGGTCGAGCAGCCAGCACCAGGATGAGGCTCtcgccgacgacgacgcgaTCTCGAACGACTCGGATCCGGACCGACTGGAGATCGAGGATCGCGACGAGGAAGAGCCGGCCGAGAGCGAGGAGGCCGACGAGAACGGCTACGACATGAGCATGCCCGCCAAGAGGTGCAAAGTCGACAGCGGCATCGGCGAGGCGAACAGGCCCGGCAGCAGCAGCCCGAACGCCGCCAATGTCAGCCCCATAAACAGGATGGACACGCCCGAGAGCAACTGCTCCGACAGCCAGGTCGACCAGGAGACTACCAAGCTCTGGCAAGCGCTCGCAAGCAACCGTAACCTCGAGATAACGCGGACGAACGGCGACAAGCCGAAAAACGGGTTCAGCGGcgagacgacgacgacgatgctCCGCAAGTTGATCAACATGTCGGCGATGGAGCGAGTGGTTGAGGCAGCGGCGGTCGCCGCTCAAGTCGCAGGATCCGGCGCTCCTCAGGTGCGCTTCTACCGGGACACCCAAGGCGCGCAGAGCCTGGCACCCCCACCCACTGACGGACCTGTGCACGGAAACCGTACCAGCATCATCGGACGCGTCGATCATCAGAACACGTCGATGGACAGCAATCCGTCGAGTCCAGCGAGCGGTCGCAAGGAGACGAAGGGCCGGCGGAAGCAAAGTTACCCGAGCAAGGCTGCCAGTCCTGCAGACTATACTCACAAGGAGTCCATCGAAGATCACGCTCAAGACTTCACCGCCTGGTCCAACAAAATGAAGAGCGAAAATCAGCAGATTGAGCAGAAGCCAGAGTTGGATCAGCATGGCATGGTAGTGGGCGGTAACGGAGCGAACAACGTGAACAACGCTGCCAAGAAGGTGGACATGTCGTGCACGAATTGCGGCACGATGACAACGACGATCTGGAGGCGAAACATGAAGGGCGAGATGGTCTGCAATGCTTGCGGCCTCTACTACAAGCTGCACGGGGTGAACCGACCGGTGACCATGCGACGCGACACCATACACACCCGGCGGCGCAGGCCTAAAGGCGAGAAGACCAGCAGGCACCGAAAGAAGGGTGACAATGGAAACGTAACCATTCAGCCACAGCAACAAGTTGTTAGCAGTCATCCGCCGTCACAGCCTCCATCAGATTCAATGGACCCAGAGAGCGCGGACATGCTGGCAGCACTGCGACGTCAGATCCAGCCACACCTGATTATGGCTGCGGCGATGCCGTCACAACAACCAGGACACGGTATCCCGCCGGTTCACGGCCCACCCATTGCCGCGGCGCCACTCAACTTCTCCATTCCCCTTAGTTCCTTCATGATGCATcaAGTGAAGCAAGAGGTAGATCGTCCAGACGACTACGACGAAATGGACGACGACGGTGACGAGGAGAATGTGTCGGATGTGCCGTTGAACTTGGTCGCCACATCGTTGGCCGAGGAGGCCCACTGA
- Protein Sequence
- MFVKSGFMENTKPVQTGTPVFIRELKSRHFPKADDIVKCLRGQQLTVQYLQTNGFEIPIIVDNKDGLDMIVPAPNFSLNDIESFIGSYNSIMKDRELEIKVKDKSNNSTAKLEADISSLHSSYHELNKTVFAEGPNSPASINQYLLPGHTRTHHLEQSSLHSMDRSSSQHQDEALADDDAISNDSDPDRLEIEDRDEEEPAESEEADENGYDMSMPAKRCKVDSGIGEANRPGSSSPNAANVSPINRMDTPESNCSDSQVDQETTKLWQALASNRNLEITRTNGDKPKNGFSGETTTTMLRKLINMSAMERVVEAAAVAAQVAGSGAPQVRFYRDTQGAQSLAPPPTDGPVHGNRTSIIGRVDHQNTSMDSNPSSPASGRKETKGRRKQSYPSKAASPADYTHKESIEDHAQDFTAWSNKMKSENQQIEQKPELDQHGMVVGGNGANNVNNAAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKTSRHRKKGDNGNVTIQPQQQVVSSHPPSQPPSDSMDPESADMLAALRRQIQPHLIMAAAMPSQQPGHGIPPVHGPPIAAAPLNFSIPLSSFMMHQVKQEVDRPDDYDEMDDDGDEENVSDVPLNLVATSLAEEAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01381759;
- 90% Identity
- iTF_01381759;
- 80% Identity
- -