Stex004840.2
Basic Information
- Insect
- Sycophila texana
- Gene Symbol
- ncor1
- Assembly
- GCA_035582955.1
- Location
- JAWWEN010000020.1:16978459-16989258[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7 8.2e+03 -2.2 0.1 31 39 550 559 547 560 0.80 2 2 2.2e-09 2.3e-06 28.4 0.1 3 43 722 762 721 765 0.96
Sequence Information
- Coding Sequence
- atggaaatttacGGGGGAAATGTTGCTCAGCTACGCGTTTTGCGAAAGCCCCAGCAGAGCTACGGTTCAAACTCACGTCAAGCGGTGTCGCCGCGGACGGTCGAGGGTAGCGGTGTCGGGGGCGTCGGCGGCGGTGCTGCTGCGGCGGGTGGCGGCAGCGCTGGCGGCCCTGGCAGCCTCGTCGTCGGCGCAGGGGCCGCACGCTATCCCCAGCAACAGCCGCAGCCGCAGCACCAGCAGCCCCAGCCGCAGCatcaccagcagcagcagcaccatCACCTCCAGCCGGCGCACCACTTCTACCACTACCCGCTGCACCAGCACCaggtcgccgccgccgccgccacctcATCATCGCCGGGATCCTTGGCGATGAACAGTGGCCCGGCTGGCGGCCCTGGCCAGCCACCAGCGGGACTACAAGCGACCTCCTCGACCTCCTCAGCACGCGATCAGCACACGCAGCAAGGAAGCGACCAGAGCGGTTTGAACATCACGATAATGAATATCACAGTGCCGCCTGTGGTGCCGGTGCCTACGGGCCTGCGCTTCGTCCATCCTGCATACCTGCCGCCACCCCATCCGCACCCACCGCCACAATCGGCTGCCTCGGTTGCTTCGTCCAACTCGGCCTCGCCAGTCTCGGCCTCCCCGGGTCCCGCCTCCATCGTGCAGCAGGTCAGCAGGCAGCATCCCCCCTCGGCACCGTCGCCAGCTTCGAGCGCCGCTGCGGCTTACACCCGTGACGTCTACCGTAATGCCAGTCCCAATgTGAACGAGCGAGTGGCGATAAGCGTTAGCAGTAGCCCAGTGTCTTCTCGAATTGCCGAGATAAGCAACGAGTACGTGATGAGCGGTCGGGGCGACCGGCCACGGATATCCCTGCTGCCGGCCCCGGCCTCGATAGCTCCGGCGGCCTCGCCGACCGCGCCCACGGACTATCACGCGGCGGCGCGCAACAGCCGAGCTCCCGGAGCTCCGGTTGGTATCCTGACGATGCAGCCACAGGACTACCGACCCAGTCCCGTCGACATGGCGCAAATTCAACAGGATGCACCTCCCTTCAAGAAAATCCGCCTCGGACAGCCCATCCAGCAACTGCCACCGACGCAGCAGCCGCAACAAatgcagcagcaacagcagccgCAGTCGATATCGCAGCCCGACTGCCAGAGGATCTCGAGTGCCCAAGACACGCTTAATAAGCAGAAGCACGTGCAACAGATGCAGCCGCTCAGGATAGACACGAGGCCGTCAGCAGGTGCGTACACGCCTCAAACGGAAGCGATCTCACCGACCCTTCCAGAACCTAATACGCAAGAGGATGCGACATTTAAGAGCACCAAAGATGATCTCCTTCAGCAGATCACGAAGGTGGATCGGGAAATCGCAAAAAGGGAGACGCAAATCAGTAAACTTCAGAAAAAGCTTAAAGAGCTCGAAGAAGTCGCCAGCAGACCCTTGGATGGCCCAGGCAGTAAGCGGCCTGTCGAAGAAGCGTCTCAGCAACCTAAGCATCAATCccttgtacaaaaaatttatgctgAAAATAAGAAAAAAGCGGAGGAGGCGCACAGGCTGTTGGAGAAACTAGGCCCGAAGGTGAAACTGCCACTGTATAATCAGCCGTCGGATACGAGTGTGTATCAGGAGAACCGCACGAGGCATCAGTGCATGAAGACCCGCCTGGTTGCGAGACTGCGGAAAGAGCACACGGAACGGGCCTCGTTACACCGCCAACAGTCCCAAACGTACGCGATACTCGTGCAGGAATGGCACCGTAAACTGGAAAAACTGGAGTCGTCGCAGAAACGCAAAACGAAGGAAGCCAAAAATCGTGAGTTCTTCGAAAAGGTCTTCTCCGAGCTGCGCAAGCAACGAGAGGATAAGGAGCGCTTCAACAGAGTTGGTTCGCGTGTCAAGAGCGATGCAGACCTTGAGGAAGTACTGGATTGCCTGCAAGAACAGGAGGAAGAGTTGTCggccgaaataaaaaatgcgttGAAAGCTCGTCAGATTGAGGACAAGAAGATGCGCTCGTACGCAGTTATACCGCCACTGCTGCTGGACGCAAAGCAGCGCAAAATCGCATTTCAGAATCGCAACGGTCTGCTGCAACCGGAGGAGCTCGAGTCGTTGCACAGGGAAAGGAAGCTGATAAACGTCTGGAGTCAGACCGAGCACGAGCTCTTCAAGGAGAAGTACCTGCAGCATCCCAAGAACTTCGGAGCGATAGCCCAGTCGTTCGAGCACAAGTCCGTCGCAGACTGCGTGCATCACTACTACCTCACTAAGAAAGCCGAGAATTATAAGCAGCTATTGCGAAAGTCGAGGCGTACGCGTAGTTCTCGAAACAATCCTAACAATAAGataaataatagtaactCCACAATCGGACCTATAGATATTTTAACTACCGGAGTAACGACGAGGCTGCAGCGTGAGCAGCAACAGAAGACCCAAGAAAACCCACAGAACAGTTCGGCGGCATCGAGTAGTAATAGTAGCGCGACCACGATAACGTCGAGCTCGTCAGCCTCGTCGTCCTCCGCTAGCGTGACGAGTAGTAGCTCGTCGGTCACGACCACGACGTCGGCGTCGTCGTCGAATCCGGCCGCAACCGCCGCCAGCTCGTCGAGTGGCAGCGGCGCCGCCGCGAGCCTGACATCGGAGTCCGCAACGACGACGGCAACCACGACGACGGTCGCCTCGACGATCGCCGCGGCCTCAGCATCCGTCCCGAGTACAGGCgccacgacgacgacgtcgagcGTACTCACGACGACCTCAACGTCGTCGGCCAGCGCCAAAGACGCCCGCGAGGCGAACAAGGAGAACAAGGAGGTTAAGACCGAGCACAAGGATTCGATTCTTCTCAAGGATAATAAGGAGGAGTCCCAGTCCAGCTCAGAAACCCTGTCCAGCAGGGAAATTAAAGTCGAAGGTAAAGGTGCGCTGTCCTCGTCGTCGAACGCCAGTTTGGCTAACGTGAACAACGCGAGCAGCAATCTGGAACCGAAGGACAAGAAGAAGAACGCGGCTACGACGGGCGGCTCGACTGGCACCAGCAGGTCGAAGGACAAGAAAAAGGACAACCATGCGACGCCCATGGAAACCAGCGACGAGGAGACGCAGGCTATGGACGCGATGGAGATGCAAACGAACACACGTGAAGGACGAATATTTCTAGGAAAATAA
- Protein Sequence
- MEIYGGNVAQLRVLRKPQQSYGSNSRQAVSPRTVEGSGVGGVGGGAAAAGGGSAGGPGSLVVGAGAARYPQQQPQPQHQQPQPQHHQQQQHHHLQPAHHFYHYPLHQHQVAAAAATSSSPGSLAMNSGPAGGPGQPPAGLQATSSTSSARDQHTQQGSDQSGLNITIMNITVPPVVPVPTGLRFVHPAYLPPPHPHPPPQSAASVASSNSASPVSASPGPASIVQQVSRQHPPSAPSPASSAAAAYTRDVYRNASPNVNERVAISVSSSPVSSRIAEISNEYVMSGRGDRPRISLLPAPASIAPAASPTAPTDYHAAARNSRAPGAPVGILTMQPQDYRPSPVDMAQIQQDAPPFKKIRLGQPIQQLPPTQQPQQMQQQQQPQSISQPDCQRISSAQDTLNKQKHVQQMQPLRIDTRPSAGAYTPQTEAISPTLPEPNTQEDATFKSTKDDLLQQITKVDREIAKRETQISKLQKKLKELEEVASRPLDGPGSKRPVEEASQQPKHQSLVQKIYAENKKKAEEAHRLLEKLGPKVKLPLYNQPSDTSVYQENRTRHQCMKTRLVARLRKEHTERASLHRQQSQTYAILVQEWHRKLEKLESSQKRKTKEAKNREFFEKVFSELRKQREDKERFNRVGSRVKSDADLEEVLDCLQEQEEELSAEIKNALKARQIEDKKMRSYAVIPPLLLDAKQRKIAFQNRNGLLQPEELESLHRERKLINVWSQTEHELFKEKYLQHPKNFGAIAQSFEHKSVADCVHHYYLTKKAENYKQLLRKSRRTRSSRNNPNNKINNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQNSSAASSSNSSATTITSSSSASSSSASVTSSSSSVTTTTSASSSNPAATAASSSSGSGAAASLTSESATTTATTTTVASTIAAASASVPSTGATTTTSSVLTTTSTSSASAKDAREANKENKEVKTEHKDSILLKDNKEESQSSSETLSSREIKVEGKGALSSSSNASLANVNNASSNLEPKDKKKNAATTGGSTGTSRSKDKKKDNHATPMETSDEETQAMDAMEMQTNTREGRIFLGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00713610; iTF_00714317; iTF_00712793; iTF_01380544;
- 90% Identity
- iTF_01380544;
- 80% Identity
- -