Stex005761.5
Basic Information
- Insect
- Sycophila texana
- Gene Symbol
- FOXP1
- Assembly
- GCA_035582955.1
- Location
- JAWWEN010000038.1:11104101-11124971[+]
Transcription Factor Domain
- TF Family
- Fork_head
- Domain
- Fork_head domain
- PFAM
- PF00250
- TF Group
- Helix-turn-helix
- Description
- The fork head domain is a conserved DNA-binding domain (also known as a winged helix) of about 100 amino-acid residues. Drosophila melanogaster fork head protein is a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors [1]. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [1, 2, 3]. The fork head domain binds B-DNA as a monomer [2], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8 4.1e+03 -1.2 1.2 20 51 155 187 146 209 0.71 2 3 1.6e-29 2.3e-26 92.5 0.3 2 81 605 678 604 686 0.94 3 3 8.1e-06 0.012 16.5 0.0 48 82 695 724 681 729 0.85
Sequence Information
- Coding Sequence
- ATGCACTGCTTACAGGCTAACAGTTTATACGCAGCCCTgaagcagcaacagcagcaacagcagtgCGAGTCTCGGTTGGGTCGATGCCGTGAGGGACGAAGCTCGAGCGGCCCCGACAACACCAACAACGAGCAGCAGCATCAGCACGAGCTCAGTATCGAGTATCAAAGCAATGGAAAGCTCAGTCCGAGCGGGCACGCAGTGACATCAGTAGCAGCACCCATGACCCAGCAAAAGCAGCCTATCATCACGCAGCAGTCGCAGCAGCCGAGTTCCGGTGCGCCAGGCCCCCAACCAAGTCCGCATCAGAGTCCTCAAGCTCCACAGAgGGCGTCACCGCCCGATCCCTCGCAAGGTCCTCCAGGAGGGCCTCCGGGGGCACCACCGCCGTCGTCACAAACTACGGCTCAGATGATGCTGAGCCCAGTGAGTGGCATTCATCAGATGCAACAGATCATCCAGCAACACATCCTTAATCCCAATCAACTCCAGTCCTTCATGCAACAACACTCGATGTACatgcaacagcagcaacaacaacagcatcATCAGGACTCAACCTCGGAACATGCGTCGAACCAGGATAGATTCGGTTACTTTTCTTCGCTAAAAAACCACCAACATCAATTAGCCGAACTGGGCCGGAAACAGCTGGAGCAGGCAATGCAACAACTGCAGGAACAACTTCAACTGAACCTCATTCAGCAGACGCATCTACTGCAAACCGCTGATAAGAAGAAGGTATCGGCCCCACTGCAGCAACTGGCTCTTCAACAACAGCAACTCATCCAGCAGTTACAGATTACACAGCGACAGTATCTTCTGCAGCAGGGTTTAGGAATGCAAAGTCACAATCACTCATCAGGTATGCAACCTTCAGATTCTATGCCAGGATGGAAGTCAGAACCGTCGGAGAGTTCCGAGTCTCATGCGAATTCAAATGTATCAAAATCCAGTTCTAGTCTAAATGGCCTTCTTAATTCCTTAGTTACGAACCGTCGCGCGGAAATCAATGGCACGACACAACTTGACGAAAAACCGCTCGACGCCACTTGTAACGAGAAGGTTCAACATCCGCTCTACGGACACGGTGTATGCAAGTGGCCTGGATGCGAAGCCGTTTGCGAAGACTATCAGGCATTCCTCAAACACCTAAACACTGAACACACATTGGACGACCGGTCGACGGCGCAGGCGCGTGTCCAGATGCAGGTCGTCTCGCAGTTGGAAATCCAGCTGCAAAAGGAGCGTGATAGGTTAACAGCGATGATGCACCATTTACACATGGCCAAACAGATGGCCTCACCGGAACCGCCGAAATCGACGGAATCCTCGAACACACCAAGCATGCCGAAACTGAGTCTATCGTCAGCGTTGATGAATCAACCACCACCAAGTTTTGGAGGCGTTTCCCAGGTTTCTCCAGTATCGATGTCGGCCCTGGTATCGGCCGTGAGGTCACCTGCAGGTGGTCAGCTGCCTCCATCCTCGGGTGCCCCGGGCATGCCGCCGGGTCTTCCCAACATGTCCAACATGTCGGGTCTACCGCCCATGCCTAACATGCCCGGCAGCATGCCGAGTATGCCCAGCATACCCAGCATGGCTGGACCGATCCGCAGGAGAATCAGTGACAAGTCCACCTTATCGCTCGCCGGAGGACTGTATGAGGAGGGCACTGTAAGGCGCAGAGTATCCGTGGATAGATCTGGAATAGATATTAACGAAGGGCTGCCCTACATGCTGGAACGCGCTGGCCTAGACGTCCAACAAGAGATTCAGCGAAATAGGGATTTCTACAAAAATGCAGACGTTAGACCGCCGTTCACGTATGCATCATTGATACGCCAGTCCATCATCGAATCTCCGGACAAGCAATTGACGCTAAACGAGATATACAACTGGTTCCAAAATACATTCTGCTATTTCCGGCGCAACGCAGCAACGTGGAAGaaCGCAGTGCGACACAACCTGTCTCTCCACAAATGTTTCATGCGAGTCGAAAATGTGAAGGGGGCCGTGTGGACGGTGGACGAAGTGGAGTTTTACAAGAGACGTCCTCAACGCGCTTGCAGCACGACTGGGTACAACGCGATCCGCACCAATCTATCGTTGCACAAGTGTTTTGTGCGCTATGAGGACGACTTCGGGTCATTCTGGATGGTGGACGACGCCGAGTTCGTAAAGCGGCGGCATCTGTCCCGCGGCCGCCCCAGGAAATATGACCCAACCCCATCACCCACTCCACCCCACCTCTCCGCACAGGGTGTACCGTCGAAGAGTCCAACGCTCACGCACAGTCCGACTATGTATGGCGATGCTCTCAACGCGAACCTCCAGTATTTCCAGGCTGCACTCGGTGAGTCGAACATGggatttctaaataattcaatgtGTACGTCGACAGCGACGAGCCCTGATAAGGAGCACAACATGCCCCACAATGATTTAATGTCACCGCTGGACGAGTCGGGTATGCACATAAAGCAGGAGGGCCAGAGCCCGGAGGGTGGCAAGCTCTCGAGGCTGATAAAGCGCGAGCTGATGGAGGCGCCGACGGAGCAGGACACGGAGGAGGAGGCCTGCAACGATGAGCGGGACTACCCGGAGAGCCACGGTGGCCACGACTCCGGCCCCGACGAGGACATGGCCGAGGACCTCTCGATGGCGCCCGACGTGCTCGCGCCCGAGGACCACTGCGAGGCGTAG
- Protein Sequence
- MHCLQANSLYAALKQQQQQQQCESRLGRCREGRSSSGPDNTNNEQQHQHELSIEYQSNGKLSPSGHAVTSVAAPMTQQKQPIITQQSQQPSSGAPGPQPSPHQSPQAPQRASPPDPSQGPPGGPPGAPPPSSQTTAQMMLSPVSGIHQMQQIIQQHILNPNQLQSFMQQHSMYMQQQQQQQHHQDSTSEHASNQDRFGYFSSLKNHQHQLAELGRKQLEQAMQQLQEQLQLNLIQQTHLLQTADKKKVSAPLQQLALQQQQLIQQLQITQRQYLLQQGLGMQSHNHSSGMQPSDSMPGWKSEPSESSESHANSNVSKSSSSLNGLLNSLVTNRRAEINGTTQLDEKPLDATCNEKVQHPLYGHGVCKWPGCEAVCEDYQAFLKHLNTEHTLDDRSTAQARVQMQVVSQLEIQLQKERDRLTAMMHHLHMAKQMASPEPPKSTESSNTPSMPKLSLSSALMNQPPPSFGGVSQVSPVSMSALVSAVRSPAGGQLPPSSGAPGMPPGLPNMSNMSGLPPMPNMPGSMPSMPSIPSMAGPIRRRISDKSTLSLAGGLYEEGTVRRRVSVDRSGIDINEGLPYMLERAGLDVQQEIQRNRDFYKNADVRPPFTYASLIRQSIIESPDKQLTLNEIYNWFQNTFCYFRRNAATWKNAVRHNLSLHKCFMRVENVKGAVWTVDEVEFYKRRPQRACSTTGYNAIRTNLSLHKCFVRYEDDFGSFWMVDDAEFVKRRHLSRGRPRKYDPTPSPTPPHLSAQGVPSKSPTLTHSPTMYGDALNANLQYFQAALGESNMGFLNNSMCTSTATSPDKEHNMPHNDLMSPLDESGMHIKQEGQSPEGGKLSRLIKRELMEAPTEQDTEEEACNDERDYPESHGGHDSGPDEDMAEDLSMAPDVLAPEDHCEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00073538; iTF_01109924; iTF_01112397; iTF_01469478; iTF_01468647; iTF_01465999; iTF_01464858; iTF_00326184; iTF_00734385; iTF_00668236; iTF_00079629; iTF_01379831; iTF_00712669;
- 90% Identity
- iTF_00712669;
- 80% Identity
- -