Sque005705.1
Basic Information
- Insect
- Sycophila quercilanae
- Gene Symbol
- Bgb
- Assembly
- GCA_035582995.1
- Location
- JAWWEP010000039.1:15857265-15858688[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.068 6.9e+02 0.5 0.1 136 162 15 41 7 47 0.82 2 2 2.3e-33 2.3e-29 102.9 0.5 84 161 88 166 70 171 0.86
Sequence Information
- Coding Sequence
- ATGTTTGAGAGAGAAATAGCACCAATTTGCAAAAGAAAGCTCAAGGAGCAAAGGGAGCAGTTACAAGCTTTGATGAGTAAACTACCAGAATTGAACGAGAAGCTAGCTGTTTGGGAAGAAGAAATATGCGAAAGCGATAAAATGCTAAATGGCTTACAAAACGATATgtgtgaaattaaaagaaagtacgAAATGGGCAAACGTCGGGAAGAAAAAAGGCAACAAGGTGAAAAGGTTGACGCAAACTGGAAAAATGCTGTGACCTGTGAACTAGAAGAACAGAATCGATTGCAGGTACACCTGAAATCCCGCCTGATAATGAACGGAGTGTGCGTCATCTGGCGCGGTTGGATCGACCTGGAGCGACTGGACGGCGTGGGTTGCCTCGAGTACGACGAGGAGCGCGCCGCCGAGGAAGATGCGCTGCTTCGCGATCAAATCGAGCGCTACAACCGTAGGGTCCAGGAGCTGGAGGACAAACACAGAGCTTACCGGAGCGGCGGCGTGCAGCCGCCACACCTGAACCACCATCACCATCACCATCACGCCCATCACCCGCACCTGGGGGTACCTGGCGCGGGCACCCCCGTCGATCCTCATCTCAATCACCGCCAGGATCCCGAAATGGAGGTCCGACTGCGcgcttattaa
- Protein Sequence
- MFEREIAPICKRKLKEQREQLQALMSKLPELNEKLAVWEEEICESDKMLNGLQNDMCEIKRKYEMGKRREEKRQQGEKVDANWKNAVTCELEEQNRLQVHLKSRLIMNGVCVIWRGWIDLERLDGVGCLEYDEERAAEEDALLRDQIERYNRRVQELEDKHRAYRSGGVQPPHLNHHHHHHHAHHPHLGVPGAGTPVDPHLNHRQDPEMEVRLRAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -