Sagr007387.1
Basic Information
- Insect
- Sycophaga agraensis
- Gene Symbol
- dmrta2
- Assembly
- GCA_018906755.1
- Location
- JACCIE010000062.1:252719-255380[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-28 3.3e-24 84.9 10.8 1 47 40 86 40 86 0.99 2 2 2.6 1.5e+04 -3.7 0.1 8 12 109 113 107 116 0.69
Sequence Information
- Coding Sequence
- ATGTCTTTAGCAACAAGTGTTGGTGTAGGCATAGATGTAGATCAATTAATGCAGCCACAACAAACACAGAATGTTTTACCAGCATTTTTCTTGCGAACAAGTGCAGAGCGATATCAAAGGACACCAAAATGTGCTAGATGTAGAAATCATGGTGTTGTCTCAGCACTCAAGGGACATAAAAGGTATTGCAGATGGCGAGACTGTGTCTGCGCTAAATGCACACTTATTGCAGAAAGGCAACGTGTTATGGCAGCCCAGGATCAGCGATCCCTTGTGCACTCTGTCGGTCGCAATATGCTAACGACGACGCGCACTGTGGAGGGCTGCCGCGGCCATCTTGAGAAGGCAACCGACGACGTTGCCGTTAACACTGAAGAACAAGAGGAAGCCGAGGAAACGACGACGTTGAGAAGTAACCGAGGATGGGAATTGTCATACCGGACATCCAGGAGAGGCCGGGACAATAGACGACGCGGGGCTGAAGCATATCAGCAGGGCACGCGCCTCGTGGACTCCGCTCACCATTGCCGCAAGAGAGTCCAGAGGGGAGGGCCCGCGCCCTTTGTCTCAGGACGTCGCGGGAGATGGGATTTGGCTGTCGTCACCTGCAGTCACATAGAGAATAGATTTGGCGGTCGTCGCGTGTAG
- Protein Sequence
- MSLATSVGVGIDVDQLMQPQQTQNVLPAFFLRTSAERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQDQRSLVHSVGRNMLTTTRTVEGCRGHLEKATDDVAVNTEEQEEAEETTTLRSNRGWELSYRTSRRGRDNRRRGAEAYQQGTRLVDSAHHCRKRVQRGGPAPFVSGRRGRWDLAVVTCSHIENRFGGRRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -