Spul019840.1
Basic Information
- Insect
- Sussaba pulchella
- Gene Symbol
- nfxl1
- Assembly
- GCA_963971145.1
- Location
- OZ020176.1:6364530-6369201[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.6 1.3e+04 -3.2 1.1 15 19 125 129 124 129 0.81 2 19 0.31 2.5e+03 -1.0 0.8 4 10 160 166 159 166 0.94 3 19 9.4e-08 0.00075 19.9 16.9 1 19 174 191 174 191 0.99 4 19 0.62 4.9e+03 -1.9 1.2 6 10 217 221 216 221 0.90 5 19 1.1e-06 0.0087 16.5 13.0 4 19 230 245 228 245 0.94 6 19 3 2.4e+04 -4.2 1.1 10 13 252 255 250 256 0.73 7 19 1.2 9.9e+03 -2.9 14.7 1 19 280 299 274 299 0.88 8 19 4.3e-05 0.35 11.4 8.4 1 18 335 352 335 353 0.97 9 19 0.017 1.4e+02 3.0 8.0 1 12 387 398 387 398 0.94 10 19 2.8 2.2e+04 -4.0 1.3 6 10 408 412 408 412 0.96 11 19 5.3e-07 0.0043 17.5 16.5 1 19 418 436 418 436 0.94 12 19 0.00077 6.1 7.4 11.5 9 19 484 494 482 494 0.90 13 19 0.001 8.1 7.0 5.8 1 12 504 514 504 514 0.95 14 19 1.3 1e+04 -2.9 5.8 14 18 547 551 547 552 0.89 15 19 2.4 1.9e+04 -3.8 0.6 9 12 569 572 569 572 0.77 16 19 0.00047 3.8 8.0 4.6 1 12 588 599 582 599 0.91 17 19 0.72 5.8e+03 -2.1 0.8 6 10 616 620 615 620 0.88 18 19 0.00019 1.5 9.3 13.1 3 19 629 645 628 645 0.92 19 19 3e-05 0.24 11.9 12.4 1 16 690 704 690 710 0.90
Sequence Information
- Coding Sequence
- ATGAGAAAGTTCAAGCGGGCTCAGGCCCAGAATCAGGCTTCGATAGAGAAGCACCTCGTAGCAAATCCGCTGGATTCTTCCAGCGAGGAAGAAAACGAGACCAGCAACGAAGTATTGCAGCAGGCGGTAACGAAAGTCCTCTCGACTTATGAGGGCGAAGGCGGCGACACGGAGAAGTCTCTGTCGTACTTGACGGATACTTTTCAATCAGGAGGAGCCATTTGTCTCATCTGCATCTCATCCGTGAAAAAGCCAGAACCGATCTGGAACTGTTCGACATGCTTTTCCTTCATGCATCTACCCTGCATTCAACATTGGATAAGGGACAGTCTGAGTTACAAGCACGAAAAAGGAATAACGCCTTTGTGGGCCTGCCCAAAATGTCGAAACGAGTACCAGGAGGACCAAATTCCAAAGCGCTACCTCTGTTTCTGCGGCCAAACGACGGATCCCCCGTACCAGCCTTGGACGATACCCCACTCGTGCGGCGAAAAATGCAACAAACCCCTTCAACCCCTCTGCGGTCACCGCTGCGTCCTTCTCTGTCACCCCGGCCCCTGTCCGCCCTGCCCAAAAATGGTTCGCGTCGCTTGTTTCTGCGGCAAACAATCCCCCCAACCGCGTCGCTGCAACGCCAAAGACTGGAGCTGTCAACAAATTTGTTCCAAACCTTTGCCCCTGTGCGATCATCGTTGCAACGTCGAATGTCACTCGGGCGATTGTCCGCCTTGCTCAAAAATCCTCTCCTCTCGCTGTCACTGCGGCGCCAGCACCGAAGAACGTCCTTGCAACCAATCCAATTGGTTTTGCGCCAAACGTTGCGGCAATCGCTTATCCTGCAACGTTCACGTTTGCGAAGATCATTGTCATCGTCCCAACGACTGCGGCGAATGTCCACACGCGCAAAATCGCACTTGCCCCTGCGGCAAAAAACGTTACGACGTTTCGTGCAAACAAAAACAAGTCCCAACTTGCGGCGATACTTGTGGAAAATTGCTCGATTGCGGTTCGCACTATTGCAACATGCGTTGTCACGCAGATCGTTGCGGTCAATGTCTCGAAGTCGCCACCAAAACTTGTCGTTGTCGCAGTTACGAGAAAGAAATCGCTTGCGCCAAAGAATTTCATTGCAACAAAAAATGCGCGCAAATGCGTTTGTGCGGCAAACATttgtgcaataaaaaatgttgcgacTGTTTGTTGCGTAATAATTTCAACgtttgcgaaaaaatttgCGACAACACGTTGAATTGTCAGAAACACAAATGTCCGGCGCCATGTCACAGCGGTCCGTGTTATCCTTGTCCGCGAACAAATGTTATTCAGTGCCGTTGCGGCAACAGCAAAATAACGGTTCCTTGCGGTCGAATAAAGCGCATAAAACCGCCTCATTGCAACAAAATGTGCAAAATACCGCCGGTTTGTCATCATCCGAAACGAGAATCGCACAAATGTCATCACGGGCCTTGTCCGCCATGTCGGAAAATTTGCGGTTTGACGCATAGAAAATGCGGTCATTCTTGTCCGGCTATTTGTCACACGAAGGTTTGGGTCAAGGTCAAACCGAATGGAGTAACCGCGGAGGCTGGAAGTGGTTTTTTCGAGGCGCAGAAGGAAAGAATGCAACTAAAGACTCTTCCTTGTCCGCCTTGCGAGGTTTCCGTCATGATCACGTGTTTGGGAGGTCACGAAACTCTTCCGTGGCCCTGTCACAAAGCCGTGTCGACTTCTTGTCAACGAGAATGCGGACAACTTCTCGGATGTACGAATCACAATTGCGAAATGATTTGTCACGAAGTTTGGACGGATGGCGATGgcgaggaaggaaaaaaaaattgcgctgATTGCGAGAGACCTTGCGCGTTGTCCAGACCAACCGGATGCACTCACGCGTGTCCCAGAACTTGTCACAAAGCTCCTTGCTATCCATGCAAGCAGCTGGTCAAGATCGCTTGTCACTGCGGCATCAATACGCTTTACAAGAGATGCGCCGAATTGACTTCCGCCGATAAGGCGAAACGCGACGAGCTACTCAAATGCGGCAATCAGTGCCCTAAAAACTATCCGTGCGGTCACCGATGCGTTGAGAATTGTCATCCGGGAGCGTGTCCAAACCCGGAAGATTGCACCAAGAAAGTCAAAGTCTGGTGCAAGTgcaaaagaataaagaaagaaatttcttGCGTGATTctgcgaaaagaaaattcgatcgtCGCGTGCGACGGCGCTTGTCGCAAGATCAAAGAGGAACAACGGCAAATACGCGAAATGGAGGCGGCGAAGAAACGACGAGAGGAGGAAGTACGAAATCAGATGGAGATCGAGAAATTCGAGAGAAAATTCAAACCACGAAGAAAGGGCAGAGGAAGAACGCAATCGAGCGATAATCTCAATGAGGGTCGAAGTTATTTGTTCAAAATAATCACAGCTGTTGTCGTACTTTTCGTCGCAATTGCGATTGTCGTATTTTATACAAACGAACGAGTTTAA
- Protein Sequence
- MRKFKRAQAQNQASIEKHLVANPLDSSSEEENETSNEVLQQAVTKVLSTYEGEGGDTEKSLSYLTDTFQSGGAICLICISSVKKPEPIWNCSTCFSFMHLPCIQHWIRDSLSYKHEKGITPLWACPKCRNEYQEDQIPKRYLCFCGQTTDPPYQPWTIPHSCGEKCNKPLQPLCGHRCVLLCHPGPCPPCPKMVRVACFCGKQSPQPRRCNAKDWSCQQICSKPLPLCDHRCNVECHSGDCPPCSKILSSRCHCGASTEERPCNQSNWFCAKRCGNRLSCNVHVCEDHCHRPNDCGECPHAQNRTCPCGKKRYDVSCKQKQVPTCGDTCGKLLDCGSHYCNMRCHADRCGQCLEVATKTCRCRSYEKEIACAKEFHCNKKCAQMRLCGKHLCNKKCCDCLLRNNFNVCEKICDNTLNCQKHKCPAPCHSGPCYPCPRTNVIQCRCGNSKITVPCGRIKRIKPPHCNKMCKIPPVCHHPKRESHKCHHGPCPPCRKICGLTHRKCGHSCPAICHTKVWVKVKPNGVTAEAGSGFFEAQKERMQLKTLPCPPCEVSVMITCLGGHETLPWPCHKAVSTSCQRECGQLLGCTNHNCEMICHEVWTDGDGEEGKKNCADCERPCALSRPTGCTHACPRTCHKAPCYPCKQLVKIACHCGINTLYKRCAELTSADKAKRDELLKCGNQCPKNYPCGHRCVENCHPGACPNPEDCTKKVKVWCKCKRIKKEISCVILRKENSIVACDGACRKIKEEQRQIREMEAAKKRREEEVRNQMEIEKFERKFKPRRKGRGRTQSSDNLNEGRSYLFKIITAVVVLFVAIAIVVFYTNERV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00343554;
- 90% Identity
- -
- 80% Identity
- -