Basic Information

Insect: Sussaba pulchella
Gene Symbol: -
Assembly: GCA_963971145.1
Location: OZ020178.1:6443525-6452424[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3e-05 0.0027 18.4 0.7 1 23 165 187 165 187 0.95

2 15 0.0011 0.1 13.5 1.1 3 23 195 215 194 215 0.99

3 15 9.4e-05 0.0087 16.9 0.0 1 23 345 367 345 367 0.98

4 15 0.035 3.3 8.8 0.1 1 23 373 396 373 396 0.97

5 15 9e-05 0.0084 16.9 1.8 1 23 440 462 440 462 0.98

6 15 2 1.9e+02 3.2 0.0 1 23 478 500 478 500 0.86

7 15 0.62 58 4.8 0.4 2 23 507 529 507 529 0.94

8 15 0.0026 0.25 12.3 2.8 2 19 537 554 537 558 0.95

9 15 0.00023 0.021 15.7 3.5 3 23 566 586 564 586 0.97

10 15 0.016 1.5 9.8 0.1 3 23 593 613 592 613 0.97

11 15 9.5e-06 0.00089 20.0 0.4 1 23 622 644 622 644 0.98

12 15 0.0041 0.38 11.7 0.2 3 23 652 672 650 672 0.97

13 15 0.0037 0.34 11.9 0.2 3 23 680 700 678 701 0.94

14 15 1.5 1.4e+02 3.6 0.0 1 23 715 737 715 737 0.91

15 15 0.03 2.8 9.0 0.0 1 20 1124 1143 1124 1146 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3e-05	0.0027	18.4	0.7	1	23	165	187	165	187	0.95
2	15	0.0011	0.1	13.5	1.1	3	23	195	215	194	215	0.99
3	15	9.4e-05	0.0087	16.9	0.0	1	23	345	367	345	367	0.98
4	15	0.035	3.3	8.8	0.1	1	23	373	396	373	396	0.97
5	15	9e-05	0.0084	16.9	1.8	1	23	440	462	440	462	0.98
6	15	2	1.9e+02	3.2	0.0	1	23	478	500	478	500	0.86
7	15	0.62	58	4.8	0.4	2	23	507	529	507	529	0.94
8	15	0.0026	0.25	12.3	2.8	2	19	537	554	537	558	0.95
9	15	0.00023	0.021	15.7	3.5	3	23	566	586	564	586	0.97
10	15	0.016	1.5	9.8	0.1	3	23	593	613	592	613	0.97
11	15	9.5e-06	0.00089	20.0	0.4	1	23	622	644	622	644	0.98
12	15	0.0041	0.38	11.7	0.2	3	23	652	672	650	672	0.97
13	15	0.0037	0.34	11.9	0.2	3	23	680	700	678	701	0.94
14	15	1.5	1.4e+02	3.6	0.0	1	23	715	737	715	737	0.91
15	15	0.03	2.8	9.0	0.0	1	20	1124	1143	1124	1146	0.93

Sequence Information

Coding Sequence: ATGGACGTATCCGGTGATTTGACGCTACAATGGGTGGAGGAGGTTGGAAACGTGATTCACGAGGAGGTAATATGCGGTCTGGAGGCGGAATTGGAAGCTCCGGAGGAGGAAGTTATCGGAGCTTGTGAAGAAGTTTGCATGGAAGAAACGGTTCAAACGGCGCCTGATCACGAAACCGTAGCCGGCGGAGGCGACGCCGACGTTGATGCCGATGCCGATCACGATGCCGAACCCGATCCAGATAACGAAATGATGATGGTGCCCCAGCCGAGCGATATGGAATCTATCTACATCGTTCCGCAGGATCAGGGTCACGATTATCTGAACATTCAAGTCACCGAAGAAGTCATTACTGACAATTGGGACAGATCTGGTCCCGACGAtggGGTGGAAATTCCGGAAACAAAAGTCTCCCACGACAATTTGTTGGAATACGACGACATGGAAATACCATTGCCGATAGATCAAGACTcctacacgaacacacgaccctATCCCTGCGACTTCTGCAGTCGAAGGTTTCGCAAAAAAGCCAATTTAATGAATCACATGGTCGCCCATCAAACCGATCGTCCGCACGGTTGCAATTTGTGCGGTGCTCGTTACGTTCGAAAATGCGATCTCATGAATCATCTAAAAATTCACGCTTACGCTCCGTCTCGAGACGGTCTCGAAGACGATTTGGCCGACGACGATTCGCTCGCtcaggaagaagaagaaacgacgAAAGGTCGTCGCAAAAAAGTTCAATCGAACGCACCGagaaaacgtaaaaataattccgctGCCGCCGGAAAACGTAACAATCAGGacgattcaacgaaaataatcgttACGAACAAATACGTTAACAAATCTTACGATTACGTGGACGAAGATATGAGATTACTCGAAGTAATGACTAATCGTAATTCGTCGAATTCACGAAATTCCGTGAATAATTACGCTTCGAGCTCGCGATGGAACGAACAAATGTCACCGATCGAAGAACCTCAACCGCCACGTTGGCCAATCACGGATCCGACGAAACCTTACGTTTGTCAATATTGCGGAGTCGGTTTTGCGCGTGAAAAAGCTTTGGCTTCGCACGCGAGAATTCACGGTGGCGACAGTCCGTTCGAATGCACGAATTGCGGTGACATGTTTTGGGACGTTAACGCGTTGAGGGAACACATGAGGGTGAAGCACGGTGTGGGTGTCGCGGGTGGAGGAAGCGGAAGTGGCGGAGGTGGTAGCGGCGTTAACGCCGGGGGGAACGATGCCGAGGATTTTGAGAATAACGATGCGACTTACACGGGGGACGAGAGATTCGGGGAATTTTATTGTGATACTTGCGGCGTTCCGTTTCATCGGTTGGATTTGTTGAAACGTCATAGGAAGGTACACGTTAAACAAGAGGTAACCGACACGATGGAAGGCTCGAGTCAGCATCATGTCTGCAACGTCTGCGGCGAGTGGTTCGAGGAGGCTCTGGCCCTGTTGGCCCATGCCGAATTGCACGCGAGATCGCCGACTCGCAGATGTTTATTGTGCGGCGAGCGATGTCGTGACGACGCCGAGGTTGCCGAGCACGTTCGTCAGAATCACGCTGAAGACGCGCCGCCGAATACTTGCACGATGTGCGGAAAAACTTGCAAAGACAAACGGAGTCTACTCAAACATTCTTGGGTCCACAACGCGGATAAAACGTTCGGTTGCACCAAGTGCGGCAAACGCTTTCACAGCAAAGCCAGATTACGCAGacaCATGGTTTCGCATCGCAATAAAATGGTGGCGTGCGACGAGTGCGGCGAGGAGTTTCCGGACGGCCGTGCTCTGGTGAGCCATCGTCATTCGCACAACAAAGAACTCGGCGGTCGATCGTTTCCATGTCGCGAGTGCGGCAAGACTTTCGGAAGCCGAAGCTCCCAACAGATACACATTCGCATACACACCGGCGAACGTCCGTACGGATGTAGATTCTGTTGGAAGGCCTTCGCCGACGGCGGCACCCTCAGGAAACACGAGCGCATACACACGGGCGAGAAGCCTTACGGATGCGCCATATGTCCTCGCGCCTTCAATCAACGGGTGGTTCTTCGCGAGCACGTTCGCGCCCATCACTCGGGTCCCGATCCAAAATGTCACGGTACCATGACCCCGTTTCTCTGCAAAGTCTGCGGCGACGCTTACGGCACGTCCGAAGAAATCGTCGCTCACATAGTTCAACACTGCGACGACAACACCGCTCTGCGACGTCAACCCCAAATAGGACCGCGCAAATACAAACGCAGACGCAAACTAAAACCTCACGAGCCAAATTCCATCGCTCTGCCAACCGCTCGCACAACGATAAACGAAAATTACAACGTTCACGAAACCGCTTCGGATTCCGACGACAATACGAAACGAAAATTAGGACGTAAGAACAAACAACGAAGCAACGTCGAAGACGGTTATCAAAACGTTCTCAAAAGTTTCGAAAGTTCTTTGCAAAACATCAATTCCATCGTGAGCAATACAAAGATAAAAcccacaaaaacaaaattgggaaaaaaaaatttacgtgcAAAAACGACGATcggtgatgaaaaaaaattatcggaatCATCGACTTCCGGACAACAATCGGGTCGTCCAAAAATGATTCACACGCAAAAAACTCGTGTTCCCGTGGATGCCGGTGGCGACGGTGTTAAAAAaggacaaaaaacaaaaacaatggtCACGAGAACGCCAAAAGTTATGCCGAACGATGGTAAAAGTGGTAATTTTCCCGGTGGCGAGAGAAATCGTCCGCGAACGAAGAACGTGAGTTATCACGTCGAGGGAAGATTGCAATTGTCACCAGCGACGTTTCCGAAACAACGCAAAGACGTGAATTCTGATAAATCAACGACGAGAAACGCaccgaaaaaatcatcgaacaatCATGCCAACAACAATGGAAATATCGTGGAAACGACGGAAAAATTGGAACAATATGGAAATAATTCGGCttcggtaacgaaaaaacgCGCGTCACCgactaagagagtgagaaagatgAGGCATCAAGTTATGATCAAGCAAGAACCGATCGAAATAccggaagaagatgaagaaattcgtgacaataataattccgaaGATACGTTAAATTCGCGTTTTTCGAACGAACAAACGACGATGGAGACGAATTTGTCGTACGAACCGAGAATTTTGAATGCCAGGGAAGAATGCATACTTCCGGATCTCGAGGAAGACGCGATGGTGCACGCTGGAAAGATGAAATTGAGTATAAAAGTCGAAGCAACAGCGGCGTCACAGAGAATCGTGATGGAACCACGTGGAATTACCGTGACAACGCCCGAGGACGTTGCCGAGACTATTATACCGGATACACTCGAATACACGTGCGAAATGTGCTCCGCCGTGTTTGGAAGCCGTGCAGAATTGCTCATACACGTGCCCATACACATTTGA
Protein Sequence: MDVSGDLTLQWVEEVGNVIHEEVICGLEAELEAPEEEVIGACEEVCMEETVQTAPDHETVAGGGDADVDADADHDAEPDPDNEMMMVPQPSDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPSRDGLEDDLADDDSLAQEEEETTKGRRKKVQSNAPRKRKNNSAAAGKRNNQDDSTKIIVTNKYVNKSYDYVDEDMRLLEVMTNRNSSNSRNSVNNYASSSRWNEQMSPIEEPQPPRWPITDPTKPYVCQYCGVGFAREKALASHARIHGGDSPFECTNCGDMFWDVNALREHMRVKHGVGVAGGGSGSGGGGSGVNAGGNDAEDFENNDATYTGDERFGEFYCDTCGVPFHRLDLLKRHRKVHVKQEVTDTMEGSSQHHVCNVCGEWFEEALALLAHAELHARSPTRRCLLCGERCRDDAEVAEHVRQNHAEDAPPNTCTMCGKTCKDKRSLLKHSWVHNADKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKELGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHGTMTPFLCKVCGDAYGTSEEIVAHIVQHCDDNTALRRQPQIGPRKYKRRRKLKPHEPNSIALPTARTTINENYNVHETASDSDDNTKRKLGRKNKQRSNVEDGYQNVLKSFESSLQNINSIVSNTKIKPTKTKLGKKNLRAKTTIGDEKKLSESSTSGQQSGRPKMIHTQKTRVPVDAGGDGVKKGQKTKTMVTRTPKVMPNDGKSGNFPGGERNRPRTKNVSYHVEGRLQLSPATFPKQRKDVNSDKSTTRNAPKKSSNNHANNNGNIVETTEKLEQYGNNSASVTKKRASPTKRVRKMRHQVMIKQEPIEIPEEDEEIRDNNNSEDTLNSRFSNEQTTMETNLSYEPRILNAREECILPDLEEDAMVHAGKMKLSIKVEATAASQRIVMEPRGITVTTPEDVAETIIPDTLEYTCEMCSAVFGSRAELLIHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01207567; iTF_00414513; iTF_00653041; iTF_00343355; iTF_00459964;
90% Identity: -
80% Identity: -