Basic Information

Insect: Pimpla rufipes
Gene Symbol: -
Assembly: GCA_963932165.1
Location: OZ010632.1:25322377-25328104[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.1e-05 0.0026 18.4 0.7 1 23 151 173 151 173 0.95

2 15 0.0011 0.098 13.5 1.1 3 23 181 201 180 201 0.99

3 15 9.2e-05 0.0079 16.9 0.0 1 23 335 357 335 357 0.98

4 15 0.29 25 5.9 0.1 1 23 363 386 363 386 0.96

5 15 0.0001 0.0087 16.8 1.8 1 23 430 452 430 452 0.98

6 15 2.1 1.8e+02 3.2 0.0 1 23 468 490 468 490 0.86

7 15 0.64 55 4.8 0.4 2 23 497 519 497 519 0.94

8 15 0.0027 0.24 12.3 2.8 2 19 527 544 527 548 0.95

9 15 0.00024 0.02 15.6 3.5 3 23 556 576 554 576 0.97

10 15 0.017 1.5 9.8 0.1 3 23 583 603 582 603 0.97

11 15 9.9e-06 0.00085 20.0 0.4 1 23 612 634 612 634 0.98

12 15 0.0043 0.37 11.7 0.2 3 23 642 662 640 662 0.97

13 15 0.0038 0.33 11.8 0.2 3 23 670 690 668 691 0.94

14 15 0.17 14 6.7 0.0 1 23 705 727 705 727 0.93

15 15 0.031 2.7 8.9 0.0 1 20 1151 1170 1151 1173 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.1e-05	0.0026	18.4	0.7	1	23	151	173	151	173	0.95
2	15	0.0011	0.098	13.5	1.1	3	23	181	201	180	201	0.99
3	15	9.2e-05	0.0079	16.9	0.0	1	23	335	357	335	357	0.98
4	15	0.29	25	5.9	0.1	1	23	363	386	363	386	0.96
5	15	0.0001	0.0087	16.8	1.8	1	23	430	452	430	452	0.98
6	15	2.1	1.8e+02	3.2	0.0	1	23	468	490	468	490	0.86
7	15	0.64	55	4.8	0.4	2	23	497	519	497	519	0.94
8	15	0.0027	0.24	12.3	2.8	2	19	527	544	527	548	0.95
9	15	0.00024	0.02	15.6	3.5	3	23	556	576	554	576	0.97
10	15	0.017	1.5	9.8	0.1	3	23	583	603	582	603	0.97
11	15	9.9e-06	0.00085	20.0	0.4	1	23	612	634	612	634	0.98
12	15	0.0043	0.37	11.7	0.2	3	23	642	662	640	662	0.97
13	15	0.0038	0.33	11.8	0.2	3	23	670	690	668	691	0.94
14	15	0.17	14	6.7	0.0	1	23	705	727	705	727	0.93
15	15	0.031	2.7	8.9	0.0	1	20	1151	1170	1151	1173	0.93

Sequence Information

Coding Sequence: ATGGACGTGTCGGGGGATCTGACGTTACAATGGGTGGAGGAGGTGGGAAACGTGATTCACGAGGAGGTGATATGCGGCCTCGAGGCGGAACTCGAGGCCCCGGAGGAAGAGGTGATCGGGGCGTGTGAGGAGGTCTGCATGGAGGAGACGGTTCAATCGGTGCCGGATCAGGAGACGGTAGCCGGCGACGGGGACGGGGATACCGAGATAATGATGGTGCCGCAGCCGAGCGATATGGAGTCCATCTACATAGTTCCGCAGGATCAGGGACACGATTATCTGAATATTCAGGTGACCGAAGAGGTCATTACCGACAATTGGGACAGATCGGGTCCCGACGATGGGGTCGAAATCCCGGAGACGAAAGTTTCCCACGACAATTTGCTCGAGTACGACGACATGGAGATTCCCCTGCCGATCGACCAGGATTCGTACACGAACACCCGACCCTACCCCTGCGACTTCTGCAGTCGGAGGTTTCGCAAGAAAGCGAATCTGATGAATCACATGGTCGCCCATCAGACCGATCGCCCGCACGGTTGCAACCTCTGCGGCGCGCGTTACGTCCGCAAATGCGATCTCATGAATCACCTGAAGATTCACGCTTACGCGCCGTCGCGCGACGGCCTCGAGGACGATCTCGTGGACGAGGACTCGCTCgcgcaggaggaggaggagacgaCCAAGGGACGACGCAAGAAGGTCCAGTCGAGCGCCCCGCGAAAGCGGAAAAACAACAACGCCTCGGcagccgcggccgcggcggcacTCTCGAAGCGAAACAACCAGGAAGACCCGGGGAAACTCATCGAGGCCAACAAATTCGTGAGCAAGTCGTACGACTACGTCGACGAGGACATGAGACTCCTCGAGGAGATGACCAGTAGAAACACCACCGGACGAACCGGGAATTACGCCTCGAGCTCACGCTGGACCGAACAGATGTCGCCGATCGAGGAGCCGCAGCCACCACGATGGCCCATCACCGATCCCACGAAACCCTACGTTTGCCAATACTGCGGCGTTGGCTTCGCCAGGGAAAAGGCACTCGCCTCACACGCGCGCGTTCACGGCGGCGACAGCCCCTTCGAGTGCACCAATTGCGGCGACATGTTCTGGGACGTTAATGCTCTGCGCGAACACGTCAGGGTGAAACACGGCGGCGCCGGAGGTGGCGGAGGTGGAGGCGGCGGTGGAGGTGTTGGAGGCGTTTCCGTGCCCGCTCCCGAGACCGACGAGTTCGAGAACAACGACGCCACCTACACCGGCGACGAGAGATTCGGCGAGTTCTACTGTGATACTTGCGGCGTTCCGTTTCATCGGCTGGATCTGCTTAAACGTCATCGAAAAATACACGTGAAACAAGAGGCAAGCGAGATGATGGAAGGATCAAGTCAGCATCACGTTTGCAACGTCTGCGGCGAATGGTTCGAGGAGGCTCTGGCGCTGTTGGCACACGCGGAGTTGCACGCAAGATCGCCGACCCGACGTTGTTTATTGTGCGGCGAGCGATGTCGCGACGACGCCGAGGTCGCCGAGCACGTGCGCCAAAATCACGCGGAAGACGCGCCGCCGAACACGTGCACGATGTGCGGTAAAACTTGCAAAGACAAGCGAAGTCTCTTGAAACATTCGTGGGTACACAACGCGGACAAGACCTTCGGCTGTACCAAGTGCGGCAAACGCTTTCACAGCAAAGCCAGATTACGCAGACACATGGTCTCGCATCGCAACAAAATGGTGGCGTGCGACGAGTGCGGCGAGGAGTTTCCGGACGGCCGGGCGCTCGTGAGTCATCGTCACTCGCACAACAAGGAGCTCGGCGGGCGATCGTTTCCCTGTCGCGAGTGCGGCAAAACCTTCGGCAGTCGAAGCTCACAGCAGATACACATTCGCATACACACCGGTGAACGTCCCTACGGCTGCAGATTCTGTTGGAAGGCCTTCGCCGACGGCGGCACGCTCAGGAAACACGAGCGCATACACACCGGCGAGAAGCCCTACGGATGTGCCATTTGTCCTCGCGCCTTCAATCAGCGGGTGGTTCTACGCGAGCACGTTCGAGCCCATCACTCGGGTCCCGACCCCAAGTGTCACGGAAGCATGACGCCCTATCTCTGCAAAGTCTGCGGCGACTCTTACGCGACCTCGGAGGAGATCGTCGCGCACATAGTGCAGCACTGCGACGACAACACGGCGTTGCGTCGCCAGCCGCAGATAGGACCGCGAAAGTACAAGCGTAGACGCAAGCTCAAGCCCCACGAGCCGAACGCGGTGGCCGCGGCTCTGCCGGTCGCGCGGGCCCCGATAAACGAGAACTACAACGCCCTCGAGCCGGCCTCGGATTCCGACGACAACACGAAGCGAAAGCTCGGCCGGAAGAACAAGCAGCGCACGAACGTCGAGGACGACTATCAGAATGTCCTCAAGAGTTTCGAGAGCTCGCTGCAGAACATCAACTCGATAGTCAGCAACACGAAGCTCAAACCCGCGAAAACAAAGCTGGCGAAGAAGAACGTCCGGGCGAAAGCGGCGGCCGCGGGCGAGGACAAGAAATCCTCGGAAACGTCGACCTCGGGACAGCCGGGAAGGCCGAAGATGATTCACACGCAGAAAACTCGGGTGCCGGTCGAGGTGGGAAGCGACGGCGTGAAGAAGGGACAGAAGACGAAAACGATGGTGACGAGAACGCCGAAGGTGATGCCGAACGAGCACAAGACCGCGGCCTTTCCCGGCGGCGAGAGAAATCGCCCGCGCACCAAGAACGTCAGTTACCACGTCGAGGGAAGGCTGCAGCTCGCTCCCGCGACCTTTCCCAAGCAGAAGGAATCCTCGGTGGAAAAAACGACGCCgaagagcggcggcggcgccgcgggtacgaaaaaatcggcgaacaatCACGCGAACAACAACGGCACGCTCCCCGAGTCGTCCGAGAGGTcggagcagcagccgcagcagcaactGCAGCAACAGCCGACGAtaccgccgacgacgacgaaaaaacgagCCGGCGCCCTCGCGAAGAAACAACCGGTGAAACGATTGCGGCATCAGGTGATGATCAAGCAGGAGCCGATCGAGATgccggaggaggaggaggacgaggaaatTCGCGACAACAACAATTCCGAGGGTATCGTGGATTCCAGCCACTTCGGGAGCGAACAAACGATCGAGGACGGGAATATGGGCTACGAGCCGAGGATACTGAACGCCCGGGAGGAGTGCATACTGCCCGATCTCGAGGAGGACGTCATTCGTCGCGAGGAAATGATGAACGCGGGAAAGATGAAGCTGAGCGTGAAGGTCGAGGCGGCGGCcacggcggccgccgccgccgccgctgccggcgTCGCCGCCACTCAGAGGATCATCGGCGAACCCCGCGGCGTGACAATCACGCCCGCCGAGGACATACCCGAGACTATTATTCCCGATACTCTCGAGTACACGTGCGAGATGTGCTCCGCCGTTTTCGGCAGCCGCGCCGAGCTTCTCATTCACGTGCCCATACACATTTGA
Protein Sequence: MDVSGDLTLQWVEEVGNVIHEEVICGLEAELEAPEEEVIGACEEVCMEETVQSVPDQETVAGDGDGDTEIMMVPQPSDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPSRDGLEDDLVDEDSLAQEEEETTKGRRKKVQSSAPRKRKNNNASAAAAAAALSKRNNQEDPGKLIEANKFVSKSYDYVDEDMRLLEEMTSRNTTGRTGNYASSSRWTEQMSPIEEPQPPRWPITDPTKPYVCQYCGVGFAREKALASHARVHGGDSPFECTNCGDMFWDVNALREHVRVKHGGAGGGGGGGGGGGVGGVSVPAPETDEFENNDATYTGDERFGEFYCDTCGVPFHRLDLLKRHRKIHVKQEASEMMEGSSQHHVCNVCGEWFEEALALLAHAELHARSPTRRCLLCGERCRDDAEVAEHVRQNHAEDAPPNTCTMCGKTCKDKRSLLKHSWVHNADKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKELGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHGSMTPYLCKVCGDSYATSEEIVAHIVQHCDDNTALRRQPQIGPRKYKRRRKLKPHEPNAVAAALPVARAPINENYNALEPASDSDDNTKRKLGRKNKQRTNVEDDYQNVLKSFESSLQNINSIVSNTKLKPAKTKLAKKNVRAKAAAAGEDKKSSETSTSGQPGRPKMIHTQKTRVPVEVGSDGVKKGQKTKTMVTRTPKVMPNEHKTAAFPGGERNRPRTKNVSYHVEGRLQLAPATFPKQKESSVEKTTPKSGGGAAGTKKSANNHANNNGTLPESSERSEQQPQQQLQQQPTIPPTTTKKRAGALAKKQPVKRLRHQVMIKQEPIEMPEEEEDEEIRDNNNSEGIVDSSHFGSEQTIEDGNMGYEPRILNAREECILPDLEEDVIRREEMMNAGKMKLSVKVEAAATAAAAAAAAGVAATQRIIGEPRGVTITPAEDIPETIIPDTLEYTCEMCSAVFGSRAELLIHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01379466;
90% Identity: -
80% Identity: -