Svar007204.1
Basic Information
- Insect
- Suillia variegata
- Gene Symbol
- dmd-4_1
- Assembly
- GCA_949127995.1
- Location
- OX421843.1:13665747-13669084[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-25 3.3e-21 75.3 10.7 1 47 100 146 100 146 0.98 2 2 0.47 2.8e+03 -1.3 0.5 23 32 378 387 374 391 0.76
Sequence Information
- Coding Sequence
- ATGCGCGAAACTTCAACAACTACCGTTAGTAGCATTTCGTCCTTCCAACCGTGTCCGTCGTCATCCATCAAGAAATTTTCAGCGCCACCGGAAGTGTTTGTTACAAATTCCGAATTAAACCTGTCATTAGACAAAAACTTTGGAATGGACTCCAAGTCGGCGGTGGTATTGTTGGCATCCGGCAGTGATAGTAAAATCGCAACGGTTACTCCGCGAAAATCGCGTAATTTACTAGCGAAAACCTTAAAAGCGAGCAAttcattgctgctgctgcccaAAGTGGCATCGCCGTCGAATCGTATTCCAAAGTGCGCTCGTTGCCGCAACCATGGCATCATTTCCGAGTTGCGTGGCCATAAAAAGCACTGCACCTACAAGAGCTGCAAGTGTCCCAAGTGTGTGTTGATTTACGAGCGACAGCGCATTATGGCAGCGCAGGTTGCCCTCAAGCGGCAACAGGCGGTGGAGGATGCGATTGCATTGCGCTTGGTCTCCACAAAAACGGGCCAACAAATCGATGCCTTGCCACCGGGCAATATATTTGGCCTAACCGTGACCGAGCCTATTAACAGGCCTGGCACGCtaaccgccaccaccaccataaACGGCGGAGATATGGAACATACTGGGGAAGGTAGTGTCGCCGAAGATTTGAGCAGGACGAGTGCTGCAAACACAGCAGATGTCGCGGTGTCATCGGACAATATTGCAATCGCAACAACTTTAATGGACACAGGAACATCATCTTCGACTACGCCAGTTTCTCAAAATGCCATCGATATGTTGGCGCAGCTTTTTCCGCATCGTAAACGCTCGGTCTTAGAGTTGGTATTGAAACGTTGCGATTTGGACTTGATACGTGCAATTGAGAACATTTCCAATTCATGTCAAagcattacaacaacagcacaggTGACGccaccagcagcaacaccaCCAGCATCGCATCATCTGCAGACAAGAAGTGCTTTTCGACCAGTGACCACTGAAAAGtaCACCAAACAAGCGCTGGAACACAAGCAAACATCCACGTTTAGCTCACCGCAGTTAAGCACCATATGCGCCTATCCGAAGTGGTTTGTGCCGCTCTCGTTTCCCGTCACAATGGGTCATTTCTCCAATTTGGCACCACGTTGCACTCTGCCCAATTGCAATTGCATGGAAAGTTATCAATTCAATTGA
- Protein Sequence
- MRETSTTTVSSISSFQPCPSSSIKKFSAPPEVFVTNSELNLSLDKNFGMDSKSAVVLLASGSDSKIATVTPRKSRNLLAKTLKASNSLLLLPKVASPSNRIPKCARCRNHGIISELRGHKKHCTYKSCKCPKCVLIYERQRIMAAQVALKRQQAVEDAIALRLVSTKTGQQIDALPPGNIFGLTVTEPINRPGTLTATTTINGGDMEHTGEGSVAEDLSRTSAANTADVAVSSDNIAIATTLMDTGTSSSTTPVSQNAIDMLAQLFPHRKRSVLELVLKRCDLDLIRAIENISNSCQSITTTAQVTPPAATPPASHHLQTRSAFRPVTTEKYTKQALEHKQTSTFSSPQLSTICAYPKWFVPLSFPVTMGHFSNLAPRCTLPNCNCMESYQFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -