Svar019145.1
Basic Information
- Insect
- Suillia variegata
- Gene Symbol
- dl
- Assembly
- GCA_949127995.1
- Location
- OX421846.1:6287248-6289098[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-70 4.6e-67 225.6 0.1 2 169 80 249 79 249 0.97 2 3 0.96 3.9e+03 -1.9 0.6 137 137 431 431 403 476 0.54 3 3 3.6 1.5e+04 -3.8 2.6 119 119 541 541 515 565 0.43
Sequence Information
- Coding Sequence
- ATGTTTCCAAATCAAACTGTAGCCAATATTGGCGGCATGCTCGTTGGTGGCGGTCTGGGCAACTCCAACGTTTCACTTGTGGCTCctcgacgacaacaacaacaacagcaagaaccACAACATATTATCAACTTCAAGGGCATGCCGCAACAACATCAGCCTCAgcctcagcagcagcagcagcagcagcaacaacaatcgcaGTTAAGTAAAAATGTGCGTAGGAAACCGTATGTCATAATAACAGAGCAACCGGCCGCCAAAGCGCTCAGATTTCGCTATGAATGCGAGGGACGTTCGGCTGGTTCAATACCCGGCACAAATTCGACGCCCGAAAATAAAACCTATCCGACGATTGAGGTGTGCGGTCTAAAGGGACGCGCTGTTGTCGTCGTCTCGTGCGTTACCAAGGACATGCCGTATCGTTCGCATCCGCACAATCTCGTTGGCAAAGAAGGCTGCAAGAAGGGTGTCTGCACGATGGAAATCAATCCCGAAACAAAGAAGGCTGTCTTCAGTAACCTGGGCATACAGTGCGTCAAGAAGAAGGATATCGATTCGGCGCTGAAGGCTCGCGAACATATACGAGTGGACCCGTTCAAGGCTGGCTTTTCGCATCGAATGCAGCCGTCAAGCATCGATTTGAACGTGGTGCGATTGTGCTTTCAAGTGTTCATCGAGAACGAAGAGAAGCGTCTGTTCAATGATCCGCTGCGGCCTGTCGTTTCCGATCCGATTTTCGACAAGAAAGCCATGTCCGATCTGGTCATTTGCCGCATGTGCAGCTGTTCGTCGACCGTGCTGGGCAATACTCAGATTGTACTGCTGTGCGAGAAGGTTGTCAAAGAGGATATTGCCGTGAAGTTTTTCGAGGAGAGTAACGGCGCTGTGGTCTGGGAGGCCTTCGGCGAATTTCAACATGCCGATGTATACAAGCAGATGGCCATTACATTTAAGACGCCCCAATATCATACGCTGGACATTAAAAAACCAGCAAAGGTTTTGATACAACTGCGACGACCATCGGACGGCGTTACCAGTGAAGCGCTGCCATTCGAATATATTCCGCTCAACTCATTTCCGGATCATTTACGACGTAAACGTCAAAAGACGCGCGGCGATCCCAAGCATGTGTTGCTGGAACATGATGTACGACCACAAAATGACCTGGAAGGTGGGGCGAATTTGAATGTGCCGCCCATGCCAATCGATAAGCAGGACAACAGTGTGTATGCTCAACAGCAAAGGCGCCatcaccaacagcagcaacagcagcaacagcagcagcaacatgcgGTATCGACAGcgcatcaacaacaatttcaggTGGACGCAGGCGCATACCAATGGAAGAGCAAATACACTCCCaatattatacattttaataacaacaacaacaacaacaatatgaaCATCACTCACGTGACGCCCTTTCCCATGCAAAATGTGATGACGCCTAATGCGAGCGGCGTAGCCGAAGTTGGTGGCGCGGGAAGAGTTGGTACAACACATCAGCAATGGATGTTTCCACCGCCTTTACACAGTCCACATCAGCAGCatatgcaacaacagcaacaacagcaacaccaacagcaacaccatCAGGTCTACCAACAGCATCAGccgcagcagccgcagcagcagcagcaacaatatcaATACCAACATCAGACTAACATTAACGATAATGATGCTGCCGACATTGTGGGCATCATAGTGCCGCCGTCACCCGTTCCCAACAGCAGCGTACCGGATCCAACGTTGAGCAATTTACTAAACTTCAACAGCGATCAATTGGTGCAAATTAACACCGAGGATCTGGAATTATCGAATTTGTCCATTTCATCGTAG
- Protein Sequence
- MFPNQTVANIGGMLVGGGLGNSNVSLVAPRRQQQQQQEPQHIINFKGMPQQHQPQPQQQQQQQQQQSQLSKNVRRKPYVIITEQPAAKALRFRYECEGRSAGSIPGTNSTPENKTYPTIEVCGLKGRAVVVVSCVTKDMPYRSHPHNLVGKEGCKKGVCTMEINPETKKAVFSNLGIQCVKKKDIDSALKAREHIRVDPFKAGFSHRMQPSSIDLNVVRLCFQVFIENEEKRLFNDPLRPVVSDPIFDKKAMSDLVICRMCSCSSTVLGNTQIVLLCEKVVKEDIAVKFFEESNGAVVWEAFGEFQHADVYKQMAITFKTPQYHTLDIKKPAKVLIQLRRPSDGVTSEALPFEYIPLNSFPDHLRRKRQKTRGDPKHVLLEHDVRPQNDLEGGANLNVPPMPIDKQDNSVYAQQQRRHHQQQQQQQQQQQHAVSTAHQQQFQVDAGAYQWKSKYTPNIIHFNNNNNNNNMNITHVTPFPMQNVMTPNASGVAEVGGAGRVGTTHQQWMFPPPLHSPHQQHMQQQQQQQHQQQHHQVYQQHQPQQPQQQQQQYQYQHQTNINDNDAADIVGIIVPPSPVPNSSVPDPTLSNLLNFNSDQLVQINTEDLELSNLSISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -