Svar019036.1
Basic Information
- Insect
- Suillia variegata
- Gene Symbol
- dl
- Assembly
- GCA_949127995.1
- Location
- OX421846.1:4814409-4816301[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-70 4.4e-67 225.7 0.0 3 169 54 222 53 222 0.99 2 3 0.47 1.9e+03 -0.9 0.6 115 157 458 499 446 503 0.58 3 3 6 2.4e+04 -5.8 6.8 97 136 514 556 469 586 0.53
Sequence Information
- Coding Sequence
- ATGTTCCAAAGTCAAAATGTGGCCAAAAATGGCGGTGCAGGCAACTACAACGTTACGCCTATGAATCCTACACAccagcaacaaccacaacataATGTAAACATGCCGCAACAACAACCTGAGATCAGGAAAAATGCGCGTAGGAAACCGTATGCCATAATCACTGAACAACCCGCCAGTAAAGCTTTGAGATTTCGCTATGAGTGTGAGGGACGTTCGGCTGGTTCGATACCCGGCGCCAATTCCACGCCCGAAAACAAAACGTATCccacaattcaaatttgtgaTTTCCAGGATCGCGCTATCGCGGTGGTCTCGTGCGTTACCAAGGATCCGCCATACCGGCCTCATCCACACAATCTCGTCGGCAAAGAAGGCTGCAAGAAGGGTGTCTGTACCTTGGAATTCAATACGGAAACAATGAAAGCGGTCTGCACCAACCTGGGCATACAGTGCGTCAAGAAGAAGGATATCGAGTCGGCGCTGAGGTCACGCGAAGCGATACGCGTTGATCCATTTAAAACTGGTTATTCGCATCGGCTTCAGCCGTCGAGCATCGATTTGAATGCGGTGCGCTTGTGCTTTCAGGTCTTTATCGAGGGCGAACAGAAGGGTCGTTTCAATGAGCCGCTCATGCCCATTGTGTCCGATCCGATTTTCGACAAGAAAGCCATGTCGGAGCTGGTCATTCATCGTTTGTGCAACAGTTCGTCCAGCGTGCTGGGCCAAACCGAGATTATACTTTTGTGCGAGAAGATCAGCAAAGAGGATATTGCGGTGAGATTTTTCGAGGAGAAAGACGGCCTGCTGTGGGAGGCGTTCGGCGAATTTAAGCACACCGATGTATATAAGCAGACTTCGATAACTTTTAAGACGCCCCGATATCACTCGGTGGACATTTTGGAACCCGCAATGGTTTTCATTCAATTGCGACGTCCATCCGATGGAGCGACAAGCGAAGCGCTGCCATTCAAATACATGCCGCATGATAtggaatttgatattttgaaacgTAAACGCCAGAACAATGACGACGATCCGATGGACATGCCGGAAGATGACAATATGAATGTACCAAATATTCCCGGCATTAAGATGGAACCCAGTGCTGTctcgccgccgtcgccgccatTTGGCGTCTATCGTGCGCCAACCAAACACACACCGTCGCCGCAACCGTCAAATTCGCCGTCATATAGCAATCATGTTGCTGGACAACACACATCGCCCGGTCCGTTCCATCAGCAATACAATATCGGCGGTGTGGCTGCAAATGTTGGTTTTGTCGGTGGCACTTCAAATGTCTCGCCCAGGCCAATCGTTACGCCGCACTATAATGTGTACGCTCAACAGCAACACCTGCAACacccgcaacaacaacaagaacaacttcatcagcagcagcagcaacaacaacaacaacagctgcaacATGCAGGATCACATGTTGCATTTCAGCAACAATATCAAGGAAATAATGTCCAATGGGAGACCAAATATAATCCCAATCAGCAATGGAACTTGACATCGCATATGCACAATCTACAACAGAGCcagcatcaacagcaacatagTAATatgcaacaccaacaacaactgcaatacCAACAACCGCAGTACCATCAAATCCACCAACAGCAgctacagcaacagcagcaaccacAACTACAGCAATACCAACATCAGACGAACGTTAGCAATACGACTGCTGGCGCCATTGTTCGCAACGTAGTGACGTCGTCAGCCGTCGAAAGCAGTAAAAACGGTCCGACGGTGAGCAATCTGCTGAATATCGACAGCAAACAATTGGTGACAATTAACTCCGAGGATcagaaaatgttgctgcttAACTCGGAAGAcctgaaaatttcaaatttgtccaTTTCAAAGTAA
- Protein Sequence
- MFQSQNVAKNGGAGNYNVTPMNPTHQQQPQHNVNMPQQQPEIRKNARRKPYAIITEQPASKALRFRYECEGRSAGSIPGANSTPENKTYPTIQICDFQDRAIAVVSCVTKDPPYRPHPHNLVGKEGCKKGVCTLEFNTETMKAVCTNLGIQCVKKKDIESALRSREAIRVDPFKTGYSHRLQPSSIDLNAVRLCFQVFIEGEQKGRFNEPLMPIVSDPIFDKKAMSELVIHRLCNSSSSVLGQTEIILLCEKISKEDIAVRFFEEKDGLLWEAFGEFKHTDVYKQTSITFKTPRYHSVDILEPAMVFIQLRRPSDGATSEALPFKYMPHDMEFDILKRKRQNNDDDPMDMPEDDNMNVPNIPGIKMEPSAVSPPSPPFGVYRAPTKHTPSPQPSNSPSYSNHVAGQHTSPGPFHQQYNIGGVAANVGFVGGTSNVSPRPIVTPHYNVYAQQQHLQHPQQQQEQLHQQQQQQQQQQLQHAGSHVAFQQQYQGNNVQWETKYNPNQQWNLTSHMHNLQQSQHQQQHSNMQHQQQLQYQQPQYHQIHQQQLQQQQQPQLQQYQHQTNVSNTTAGAIVRNVVTSSAVESSKNGPTVSNLLNIDSKQLVTINSEDQKMLLLNSEDLKISNLSISK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -