Smeg021412.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Subacronicta megacephala
Gene Symbol
nfxl1
Assembly
GCA_958496365.1
Location
OY292536.1:794966-797437[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1 2.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.0072 2.1e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 20 1.6e-07 0.0046 17.6 15.5 3 19 186 202 185 202 0.95
4 20 0.78 2.3e+04 -3.8 0.6 6 10 227 231 226 231 0.78
5 20 1.1e-07 0.0031 18.1 10.7 3 19 239 255 237 255 0.91
6 20 0.15 4.5e+03 -1.5 2.0 5 10 279 284 279 284 0.92
7 20 5e-10 1.5e-05 25.6 12.8 1 19 290 308 290 308 0.99
8 20 7.9e-06 0.23 12.2 18.6 3 19 345 361 337 361 0.86
9 20 1 2.9e+04 -5.3 2.2 5 10 384 389 384 389 0.88
10 20 0.025 7.2e+02 1.0 23.3 1 18 395 412 395 413 0.95
11 20 2.2e-10 6.5e-06 26.7 14.0 1 19 422 440 422 440 0.99
12 20 3.9e-05 1.1 10.0 5.1 9 19 488 498 486 498 0.89
13 20 0.012 3.5e+02 2.0 1.0 6 12 497 503 497 504 0.92
14 20 0.0062 1.8e+02 2.9 6.6 4 12 510 518 508 518 0.90
15 20 0.16 4.5e+03 -1.5 3.5 14 18 547 551 547 552 0.87
16 20 0.1 2.9e+03 -0.9 0.1 8 12 568 572 567 573 0.82
17 20 9.6e-06 0.28 11.9 5.1 1 11 588 598 588 599 0.97
18 20 1 2.9e+04 -7.4 4.2 6 10 616 620 613 620 0.66
19 20 6.7e-05 2 9.2 13.5 3 18 629 645 628 646 0.86
20 20 6e-07 0.018 15.8 12.5 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCACGCAGATACAGAGACGCCGCTGCAAAGCTGCAGCAAAATGTTCAGAAACATTTGAAAGAAATGAAGGAACTATCATCGTCTGAAGACGAGGACGCCTGTGAGTCTAGCGTACTCGAAGGAGTGTTCCAGAGCTACTGGCGCGGCGGCGGGGACACCCACATGCTGAACAGGACTAAACATCTCCTCGAAGAAGCCATCAGCGGCCGCGCTGTAACATGTCTAATATGTATCGGATCGATCAAAAAGTCTCACGCTATATGGACCTGCGATCACTGCTATTCTTATTTCCACCTATCTTGCATACAGAAATGGTCGAATGACAGCATCAGCTTACGCAGCGAAGAAAGCCAGGGCCCAATTACTGTAATAAAACCCCATAAAATCGAATGGTGTTGCCCTAAGTGCCGGCATTCGTATTCTAAGGAAGAAATTCCCCGTAAATACCGCTGCTTCTGTGGCAAAACTGATGACCCTCAACTCCATCCATGGCTCATACCTCACACTTGTGGAGAAGTGTGTGAAAAGAGGCTTTCAACTAGTGAAAACTGTAAACATAGATGCTTGCTCCTTTGCCACCCTGGTCCTTGTCCTCCATGCCCACAAACTGTAAATGGGGTGTGTTATTGTGAAAAGGAACACAAGAAAGTCCGGTGCAGTGCTGCCAAATGGTCATGTGGTCAGGTTTGTAAGAAAACTCTCTTATGTAGGACTCACAAATGTGAAAACATTTGTCATGAAGGTGACTGTGCCCAGTGCAGCTACACAAGTACTCAACCATGCCTCTGTGGCTCTGAGAAAGCTAAAAGACCATGCAATGATCCATTTTGGAAGTGCCAGAAGCCATGTAACAAATTGTATTCCTGTGGTTatcataaatgtaataaaatctgcCATTCTGGTGATTGTGGTACCTGCCCCAACTCAGGAATGACATCATGCCCCTGTGGGGCTAATCAGCGCTTTGTACAATGTCCAGACATCATGGAAACCTGTGCAGGGACATGTGGTAAAAAGCATGAAGATTGTGAACACAACTGCCCTGAAAAATGTCATAATGGAGCATGCCCACCTTGCCAAGTTTTGATACCAAAGAAATGCCACTGTTCAACACATACCAGGTCGCTACCATGCAGCAAGGAGTTCAAATGTGAGACTAAATGTAGAGGAATACGACCATGTTGCAAGCATGGGTGTGGACGCAAATGCTGTAATGGAAACTGTCCTCCATGTGAGAAAACATGTGATAAGCCTCTCCAATGTGGTAGACATAAATGCACTAACATTTGCCACCGCGGACCATGCTATCCATGCCCTCTAGAATCGAAAGTAACCTGCAGATGTAAAGAAACCTATGTCACAGTCCCATGTGGCAGGGAACGGCAAACAAAACCACCAAAATGCGGCTTACCttgcaaaattaaatacaaatgtgGTCACAGTGATGAAAACAAGCACTCCTGCCATTTTGGTGACTGTCCACCATGCAAAGCCATTTGCCACAAACAATATCCAAAGTGTGACCACCAATGTAAAGCTGTGTGCCATGAGTATGTTGCAGTTATCTTTAAACAGGTGGAAAAACCGGCCACTCCATGGGAAGTCCAGCCACCTAAGACCAAGATTATGACCTTAGATTGTCCACCATGTGAAACACCAGTACCAATTGTTTGCTTTGGAGAACATGAGACAGACAATCAACCATGCCACTCAGCCACTCGGAGGCCATGTGGAAGAGAGTGTGGGCGACCATTGGCATGTGGAAACCACAACTGTACTTTACTCTGTCATCTCTACAGCCCAGTAGCTGAGTACCCAAATGTGCCTTCCAGTTGTAAGCAATGTGAACGGGAATGTTCAGTTCCTCGTCCTGAAAAATGTACACATAAATGTTCTATTCGCGCTTGCCACCCAGGACCTTGCCGTCCATGTGAAATACTTGAACGCTTGGCTTGCCACTGTGGAGTAACTGAGATTTACTTGCGCTGCCGGGAATTATCTGTAGCAACTGAAGAGATGCTGTCATGTAAGCAACAATGCCCTAAAAATTTGGATTGTGGTCATCGCTGCCGTAACACATGTCACTCAGGCCCTTGTGGCAATCAAGTATGCTTGAAGAAAACAAAAGTTTACTGCCCCTGTGGTAATATAAAAAAGGAAGCTCCTTGCAACTCTGTAAGAAACGGGGACGTAACAATTTTATGTGATAAAACCTGTGAAACTAAGAAGATTGCTGCAAAGTTAGAACAAGAGAAAGAAAAACAGAGGTTGAAAGAGTTGGAAGAAGAAAAGAATCGCAAGGAGTTGGCTGAGTATGAGTGGAAATTGAGTGGGAAAAAGAAGAAATATAAGGAGAAGAAGTTAGTCCATGACAAAGATGATAGAGGTATTTTGAGGACTTATTGGGTACCATTATCATCATTTCTAGTTATGTTGCTAGCAGcagtttattacatattttatttgtga
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKELSSSEDEDACESSVLEGVFQSYWRGGGDTHMLNRTKHLLEEAISGRAVTCLICIGSIKKSHAIWTCDHCYSYFHLSCIQKWSNDSISLRSEESQGPITVIKPHKIEWCCPKCRHSYSKEEIPRKYRCFCGKTDDPQLHPWLIPHTCGEVCEKRLSTSENCKHRCLLLCHPGPCPPCPQTVNGVCYCEKEHKKVRCSAAKWSCGQVCKKTLLCRTHKCENICHEGDCAQCSYTSTQPCLCGSEKAKRPCNDPFWKCQKPCNKLYSCGYHKCNKICHSGDCGTCPNSGMTSCPCGANQRFVQCPDIMETCAGTCGKKHEDCEHNCPEKCHNGACPPCQVLIPKKCHCSTHTRSLPCSKEFKCETKCRGIRPCCKHGCGRKCCNGNCPPCEKTCDKPLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVTVPCGRERQTKPPKCGLPCKIKYKCGHSDENKHSCHFGDCPPCKAICHKQYPKCDHQCKAVCHEYVAVIFKQVEKPATPWEVQPPKTKIMTLDCPPCETPVPIVCFGEHETDNQPCHSATRRPCGRECGRPLACGNHNCTLLCHLYSPVAEYPNVPSSCKQCERECSVPRPEKCTHKCSIRACHPGPCRPCEILERLACHCGVTEIYLRCRELSVATEEMLSCKQQCPKNLDCGHRCRNTCHSGPCGNQVCLKKTKVYCPCGNIKKEAPCNSVRNGDVTILCDKTCETKKIAAKLEQEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKLVHDKDDRGILRTYWVPLSSFLVMLLAAVYYIFYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_00384252;
80% Identity
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