Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 1.4 3e+03 -1.4 0.0 4 12 15 22 13 22 0.68

2 6 0.0028 5.9 7.2 0.0 3 16 33 45 32 49 0.85

3 6 0.041 85 3.5 0.0 4 16 53 64 51 68 0.81

4 6 0.0067 14 6.1 0.0 4 16 72 83 70 87 0.81

5 6 0.0067 14 6.1 0.0 4 16 91 102 89 106 0.81

6 6 0.0014 2.9 8.3 0.0 4 20 110 125 108 126 0.82

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	1.4	3e+03	-1.4	4	12	15	22	13	22	0.68
2	6	0.0028	5.9	7.2	3	16	33	45	32	49	0.85
3	6	0.041	85	3.5	4	16	53	64	51	68	0.81
4	6	0.0067	14	6.1	4	16	72	83	70	87	0.81
5	6	0.0067	14	6.1	4	16	91	102	89	106	0.81
6	6	0.0014	2.9	8.3	4	20	110	125	108	126	0.82

Coding Sequence: ATGTTAAATGTTTACCAGCCCATTGTGGCGTTACTAGCCCCTTGTGGCGTTAAAAGCCCGTTATGGCCTTACAAACTCGTTGTGGCGTTACCAGCCAGTTGTGGCGTTACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATATTAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTAATGGCGATACTCGAGgctcgagtttttttttttatatacttagtgttagctattgtattaattaattaccttgAAATGCAAGTAAGCATAATTTAA
Protein Sequence: MLNVYQPIVALLAPCGVKSPLWPYKLVVALPASCGVTSPLWRYQPVVAIPARCGDISPLWRYQPVVAIPARCGDTSPLWRYQPVVAIPARCGDTSPLWRYQPVVAIPARCGDTSPLWRYQPVMAILEARVFFFIYLVLAIVLINYLEMQVSII

Sequence clustering based on sequence similarity using MMseqs2