Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 1.2 2.5e+03 -1.2 0.0 4 12 15 22 13 22 0.68

2 6 0.0024 4.9 7.5 0.0 3 16 33 45 32 49 0.85

3 6 0.0047 9.8 6.5 0.0 4 16 53 64 51 69 0.79

4 6 0.0056 12 6.3 0.0 4 16 72 83 70 87 0.81

5 6 0.0056 12 6.3 0.0 4 16 91 102 89 106 0.81

6 6 0.0056 12 6.3 0.0 4 16 110 121 108 125 0.81

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	1.2	2.5e+03	-1.2	4	12	15	22	13	22	0.68
2	6	0.0024	4.9	7.5	3	16	33	45	32	49	0.85
3	6	0.0047	9.8	6.5	4	16	53	64	51	69	0.79
4	6	0.0056	12	6.3	4	16	72	83	70	87	0.81
5	6	0.0056	12	6.3	4	16	91	102	89	106	0.81
6	6	0.0056	12	6.3	4	16	110	121	108	125	0.81

Coding Sequence: ATGTTAAATGTTTACCAGCCCATTGTGGCGTTACTAGCCCCTTGTGGCGTTAAAAGCCCGTTATGGCCTTACAAACTCGTTGTGGCGTTACCAGCCAGTTGTGGCGTTACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATATTAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTTGTGGCGATACCAGCCCGTAA
Protein Sequence: MLNVYQPIVALLAPCGVKSPLWPYKLVVALPASCGVTSPLWRYQPVVAIPARCGDTSPLWRYQPVVAILARCGDTSPLWRYQPVVAIPARCGDTSPLWRYQPVVAIPARCGDTSPLWRYQPVVAIPARCGDTSP

Sequence clustering based on sequence similarity using MMseqs2