Basic Information

Insect: Subacronicta megacephala
Gene Symbol: -
Assembly: GCA_958496365.1
Location: OY292542.1:2672472-2675947[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.012 0.9 10.8 4.7 1 23 14 37 14 37 0.92

2 22 0.00011 0.0083 17.2 0.1 1 23 110 133 110 133 0.97

3 22 0.00057 0.044 14.9 0.5 1 23 138 161 138 161 0.91

4 22 0.00055 0.043 15.0 0.1 1 22 167 188 167 190 0.91

5 22 0.00029 0.023 15.8 0.7 2 23 196 218 195 218 0.95

6 22 0.021 1.7 10.0 6.3 1 23 222 245 222 245 0.97

7 22 0.29 23 6.4 0.5 2 23 252 273 251 273 0.96

8 22 0.0035 0.27 12.4 2.4 1 23 321 343 321 343 0.96

9 22 0.54 42 5.5 0.3 3 23 372 393 370 393 0.88

10 22 0.0037 0.29 12.3 0.8 1 23 413 436 413 436 0.96

11 22 2.4e-05 0.0018 19.3 0.3 1 23 441 464 441 464 0.96

12 22 0.0025 0.19 12.9 5.6 1 23 469 492 469 492 0.96

13 22 8.4e-05 0.0065 17.5 0.4 2 23 495 517 495 517 0.97

14 22 0.098 7.6 7.9 1.0 2 21 525 544 524 545 0.92

15 22 0.0029 0.22 12.7 1.8 1 23 598 621 598 621 0.96

16 22 0.025 1.9 9.8 0.0 2 23 694 717 693 717 0.95

17 22 1.1e-05 0.00086 20.3 0.1 3 23 724 745 723 745 0.94

18 22 0.0047 0.37 12.0 2.8 2 23 750 772 749 772 0.94

19 22 0.0054 0.42 11.8 4.6 1 23 777 800 777 800 0.96

20 22 1.6e-05 0.0013 19.8 5.1 1 23 804 827 804 827 0.97

21 22 0.0096 0.74 11.1 3.0 2 23 834 855 833 855 0.95

22 22 2.1e-05 0.0016 19.5 1.1 1 23 861 883 861 883 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.012	0.9	10.8	4.7	1	23	14	37	14	37	0.92
2	22	0.00011	0.0083	17.2	0.1	1	23	110	133	110	133	0.97
3	22	0.00057	0.044	14.9	0.5	1	23	138	161	138	161	0.91
4	22	0.00055	0.043	15.0	0.1	1	22	167	188	167	190	0.91
5	22	0.00029	0.023	15.8	0.7	2	23	196	218	195	218	0.95
6	22	0.021	1.7	10.0	6.3	1	23	222	245	222	245	0.97
7	22	0.29	23	6.4	0.5	2	23	252	273	251	273	0.96
8	22	0.0035	0.27	12.4	2.4	1	23	321	343	321	343	0.96
9	22	0.54	42	5.5	0.3	3	23	372	393	370	393	0.88
10	22	0.0037	0.29	12.3	0.8	1	23	413	436	413	436	0.96
11	22	2.4e-05	0.0018	19.3	0.3	1	23	441	464	441	464	0.96
12	22	0.0025	0.19	12.9	5.6	1	23	469	492	469	492	0.96
13	22	8.4e-05	0.0065	17.5	0.4	2	23	495	517	495	517	0.97
14	22	0.098	7.6	7.9	1.0	2	21	525	544	524	545	0.92
15	22	0.0029	0.22	12.7	1.8	1	23	598	621	598	621	0.96
16	22	0.025	1.9	9.8	0.0	2	23	694	717	693	717	0.95
17	22	1.1e-05	0.00086	20.3	0.1	3	23	724	745	723	745	0.94
18	22	0.0047	0.37	12.0	2.8	2	23	750	772	749	772	0.94
19	22	0.0054	0.42	11.8	4.6	1	23	777	800	777	800	0.96
20	22	1.6e-05	0.0013	19.8	5.1	1	23	804	827	804	827	0.97
21	22	0.0096	0.74	11.1	3.0	2	23	834	855	833	855	0.95
22	22	2.1e-05	0.0016	19.5	1.1	1	23	861	883	861	883	0.98

Sequence Information

Coding Sequence: ATGTCAACAGCACTCCCATTCAAATTCTTCATGAACAGATTCCGTTGCTTCTATTGCTCGAAAGACTTCACAGATTGCCAGGAATTAAAAGATCATACAATATTCACACACCCTCATTGTGATATCACATTTAAATCTATGAAATTGAAAAACAGATACGATGGAGTCCAAATCAAAGTTGACACTTCAGCTCTTGCTTGCAAATTGTGTTGTATTTCGTTAGAAAACATTGACAGTTTGATCGATCATTTGGCTAAAGAGCATAAAGCTAAGTGTTCTATTTCAGTTGAGAGTAATTTGCAGTCCTTCAAACTGATTAAGGACAATTTTCCATGCCCCATTTGCGGCGAAGTCTACCGATATTTCGGGCTTTTACTTAAACACGTGAGCACTAGACACTCGGATAACAAACACATTTGCATGTACTGCGGCAAGTCGTTCAGGGGCGATCCTAATCTTAGAGCTCACGTGTCATGGCGGCATAAAAACGCAGGAAACTATAAATGTAGAAACTGCGACTTAGCTTTTCCAACCAATAATGCCTTAAAAACACATCTTGGAGCGGTCCACGGTGACAAAATCGTTCAATGCTCAAAATGTTCAGAGAAATTTATTTCGCAGTACTGGATGCAGCGGCATATGATAAACTCCCACGCCACGGGCCATAAGTGCACTTACTGCgaaaaattattcataaaaaactcGTTTATGGTCAACCATATAAGGAGGTGTCATTTGAAAGAGAAAAACGTAGAATGTTCTGTATGTTTCGAGAAGTTTTTCGATGGACAGAGACTTAAAATGCATATGGTCAAACATGTGGGGGAAAGGAATTTCCATTGTGATATATgtgATGGTCTGCCAGGGCCGTACGAGGGCTGTACCTCTGAGCGGAGGCGGAAAAACTTGCAAACACTGTTCAACCACACTACAATTATACCTTTCAAATGGCGAGGCAAATACCTCTGCTTCTACTGCGGCAAAAACTATACAGAGTACATAGAATTCAGAAAACATACAAAATCACACGGTCTTTGCACCACTAAGGACTATTCCTTAAAACTCATCAAAGGAAATCACGTCGAAATAAAAATTGATGTCTCTGAAATCTGTTGCGATGTTTGCAATGAACCCTTCAACAAATTCGAGGAAATTATCGATCATTTGATCGGTAAACACAATCTAGAATACAACAAAGATATTGATATACCGTTCCAAGAGTATCGATTGGTTGATTTTCGATGCTTGTATTGTGAAGAACAGTTCTCTTACTTCGGTTATTTGGTTAAACACGTGAATAATGTACATCCgcagaattgttttatttgcgATGATTGCGGTGTCACTTTCAACAAGAAGAGAGATTTGGCGATACATCTGAGGAATTATCACAAGCAGGGAGGCTATCCCTGCAATTTGTGTTTAAAACATTTCCAAACGAACCATACTTTGCGTAGACATCAGAACAATATGCATTTTAGACAGTGTAAAAGCTGTGGTTTGCGTTTCGCGTCTCTCTCATTGCTGCAAAAACATTTGCAGGTCGATCATCCGCACGACGAGGCCAATATGAAATGTAGTTATTGTTCTAAAGAGTTCCACACATCCTTGGGTGTACGACAGCATATAAGCAAATGTAAAGTCAAAATTATTTCCCAAGTGGAACCAAATACTTCTTTATTAGACGAAGCTATTGAAccgaaaaagaaacaaaacattCTACAAATACGGCAAAACATACAGTGTGTATTAAACATGTCTACAGCTGTACCATTTAAATTCTTTTCAAAATATTCCTGTTTTTATTGCTCCAAAAAATTCGTAGAATTTGAAGAATTACGTCAACACACTAGTTCAGAACATCCTGTATGTGATCTGAAGTCTAAATGCATGAAGAAATGTAAAGGGGAGAGAATAGCTGTCAAGATAGACATATCTGCTTTAGCTTGCAAATTGTGCTGTCTTCCTATGTCAAATTTGgaagatttaataaaacatttgatatcTGAACATAAGGCGAACTACGACTTATCGATTACGGGTTGTCTTGAACCTTTTCGGATTATTAAGGACAATATGCCTTGTCCTATATGCCCTGATACCGGTTTCCGTTATGTCGGAAACTTGCTAAGACACATTAATTCGGAACATAGTAACAATAACAGAATCTGCGATTTTTGCGGGAGAAGTTTCCGAAATGCGGCGAATTTGAACGTTCACATTTCTTATGCCCATACGGGATCGTGTGAATGCGAGGTGTGTGGAGTCAAATACAAGAACCAATGGTGTTTGGCGAGACATAGAGCGAAGACACACAACGCGAAAGACCATAAATGCCCTAAATGTCCCGAACAGTTCCAGTCCcaatatcacaaacaaaaacactTGATCAAAATCCACAATATCGGTCATAAATGCACTTATTGCGGGAAAATGTTCACTAGAAACTCGTTCATGAAGGACCACGTAAGGAGAACGCATTTGAAGGAGAGAAACATTCCATGTTCCATTTGCCATGACAAGTTCTTCGATAATTACCATCTTAAATTGCACATGGTAAAACATGAGGGTGATAGAAAATTTAGCTGTAGTGTTTGCGGTAAAACGTTTTTGAGGCGAACTAACTTGAGCTCCCATATGGAGATGCATAAGAAATACGGACACGTACCGATGTAA
Protein Sequence: MSTALPFKFFMNRFRCFYCSKDFTDCQELKDHTIFTHPHCDITFKSMKLKNRYDGVQIKVDTSALACKLCCISLENIDSLIDHLAKEHKAKCSISVESNLQSFKLIKDNFPCPICGEVYRYFGLLLKHVSTRHSDNKHICMYCGKSFRGDPNLRAHVSWRHKNAGNYKCRNCDLAFPTNNALKTHLGAVHGDKIVQCSKCSEKFISQYWMQRHMINSHATGHKCTYCEKLFIKNSFMVNHIRRCHLKEKNVECSVCFEKFFDGQRLKMHMVKHVGERNFHCDICDGLPGPYEGCTSERRRKNLQTLFNHTTIIPFKWRGKYLCFYCGKNYTEYIEFRKHTKSHGLCTTKDYSLKLIKGNHVEIKIDVSEICCDVCNEPFNKFEEIIDHLIGKHNLEYNKDIDIPFQEYRLVDFRCLYCEEQFSYFGYLVKHVNNVHPQNCFICDDCGVTFNKKRDLAIHLRNYHKQGGYPCNLCLKHFQTNHTLRRHQNNMHFRQCKSCGLRFASLSLLQKHLQVDHPHDEANMKCSYCSKEFHTSLGVRQHISKCKVKIISQVEPNTSLLDEAIEPKKKQNILQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFVEFEELRQHTSSEHPVCDLKSKCMKKCKGERIAVKIDISALACKLCCLPMSNLEDLIKHLISEHKANYDLSITGCLEPFRIIKDNMPCPICPDTGFRYVGNLLRHINSEHSNNNRICDFCGRSFRNAANLNVHISYAHTGSCECEVCGVKYKNQWCLARHRAKTHNAKDHKCPKCPEQFQSQYHKQKHLIKIHNIGHKCTYCGKMFTRNSFMKDHVRRTHLKERNIPCSICHDKFFDNYHLKLHMVKHEGDRKFSCSVCGKTFLRRTNLSSHMEMHKKYGHVPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00017540;
90% Identity: iTF_00017540;
80% Identity: -