Basic Information

Insect: Acronicta leporina
Gene Symbol: -
Assembly: GCA_947256265.1
Location: OX366539.1:3122924-3126564[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.12 8.9 7.4 0.5 2 20 11 29 10 31 0.93

2 23 0.011 0.82 10.7 4.7 1 23 80 103 80 103 0.92

3 23 0.0005 0.039 14.9 0.1 1 23 176 199 176 199 0.92

4 23 0.0015 0.12 13.4 0.1 1 20 204 223 204 224 0.93

5 23 9.5e-05 0.0073 17.1 0.2 1 22 233 254 233 256 0.91

6 23 0.00018 0.014 16.3 0.4 2 23 262 284 261 284 0.95

7 23 0.019 1.5 9.9 6.3 1 23 288 311 288 311 0.97

8 23 0.26 20 6.3 0.5 2 23 318 339 317 339 0.96

9 23 0.002 0.15 13.0 3.2 1 23 387 409 387 409 0.96

10 23 0.033 2.6 9.1 0.2 3 23 438 459 436 459 0.90

11 23 0.0064 0.49 11.4 1.9 1 23 479 502 479 502 0.96

12 23 2.2e-05 0.0017 19.1 0.3 1 23 507 530 507 530 0.96

13 23 0.00072 0.056 14.4 5.0 1 23 535 558 535 558 0.96

14 23 7.7e-05 0.0059 17.4 0.4 2 23 561 583 561 583 0.97

15 23 0.15 11 7.1 1.2 2 21 591 610 590 611 0.91

16 23 0.0044 0.34 11.9 1.2 1 22 664 685 664 687 0.90

17 23 1.4 1.1e+02 4.0 0.0 2 23 760 783 759 783 0.93

18 23 1.7e-05 0.0013 19.5 0.1 3 23 790 811 789 811 0.94

19 23 0.0057 0.44 11.5 3.2 2 23 816 838 815 838 0.94

20 23 0.0008 0.062 14.2 2.6 1 23 843 866 843 866 0.97

21 23 0.00014 0.011 16.6 5.3 1 23 870 893 870 893 0.97

22 23 0.00027 0.021 15.7 1.2 2 23 900 921 899 921 0.96

23 23 1.3e-05 0.00098 19.9 1.1 1 23 927 949 927 949 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.12	8.9	7.4	0.5	2	20	11	29	10	31	0.93
2	23	0.011	0.82	10.7	4.7	1	23	80	103	80	103	0.92
3	23	0.0005	0.039	14.9	0.1	1	23	176	199	176	199	0.92
4	23	0.0015	0.12	13.4	0.1	1	20	204	223	204	224	0.93
5	23	9.5e-05	0.0073	17.1	0.2	1	22	233	254	233	256	0.91
6	23	0.00018	0.014	16.3	0.4	2	23	262	284	261	284	0.95
7	23	0.019	1.5	9.9	6.3	1	23	288	311	288	311	0.97
8	23	0.26	20	6.3	0.5	2	23	318	339	317	339	0.96
9	23	0.002	0.15	13.0	3.2	1	23	387	409	387	409	0.96
10	23	0.033	2.6	9.1	0.2	3	23	438	459	436	459	0.90
11	23	0.0064	0.49	11.4	1.9	1	23	479	502	479	502	0.96
12	23	2.2e-05	0.0017	19.1	0.3	1	23	507	530	507	530	0.96
13	23	0.00072	0.056	14.4	5.0	1	23	535	558	535	558	0.96
14	23	7.7e-05	0.0059	17.4	0.4	2	23	561	583	561	583	0.97
15	23	0.15	11	7.1	1.2	2	21	591	610	590	611	0.91
16	23	0.0044	0.34	11.9	1.2	1	22	664	685	664	687	0.90
17	23	1.4	1.1e+02	4.0	0.0	2	23	760	783	759	783	0.93
18	23	1.7e-05	0.0013	19.5	0.1	3	23	790	811	789	811	0.94
19	23	0.0057	0.44	11.5	3.2	2	23	816	838	815	838	0.94
20	23	0.0008	0.062	14.2	2.6	1	23	843	866	843	866	0.97
21	23	0.00014	0.011	16.6	5.3	1	23	870	893	870	893	0.97
22	23	0.00027	0.021	15.7	1.2	2	23	900	921	899	921	0.96
23	23	1.3e-05	0.00098	19.9	1.1	1	23	927	949	927	949	0.98

Sequence Information

Coding Sequence: ATGAAAACAGACCATGACAACGATGAGAATAAGTGTGGTTTTTGCAACAAAATCTTGACTACAAAACAGGCCTTTTTAAGACATGCGTCAAAATGCTCCGCGAAACATGGCACTAAGGAAGAAACTATCATAGTTGATGACGATGAGAAAAAGCAGTCGGTCAAAGAAATAAGGGACAGATTGGCTTGCATTTTCAACATGACAACAGCACTCCCGTTCAAATTCTTCATGAACAGATTCCGTTGCTTCTATTGCTCGAAAGATTTCACAGACTGTCAGGAATTAAAAGATCATACAATATTCACACACCCTCATTGCGATATAACATTTAAATCCATGAAATTGAAAAACAGATATGATGGAGTCCAAATCAAAGTTGACACTTCGGCCTTATCTTGCAAATTGTGTTGTGTTTCATTGGAAAACATAGACCATTTGATCGATCATTTGGCTAATGAGCACAAGGCTAAATGCGCTATTTCCGTTGAGAGTAATTTGCAGTCCTTTAAACTAATCAAAGACAATTTTCCATGCCCTATTTGCGGCGAAGTCTACCGATATTTCGGTTTGTTACTTAAACACGTTAGCGCTAGACACTCGGATAACAAACATATTTGTATGTATTGCGGTAAATCGTTCAGGGGCGACCCTAACCTTCGAGCTCACGTGTCATGCCGGCATAAAAACGCAGGAAACTACAAATGTAGCAACTGCGACTTAACTTTTCCAACTAACAATGCCTTAAAAACTCATCTTGGAGCAGTCCATGGCGATAAAATCATACAATGTTCAGAATGCTCGGAGAAATTCATTTCGCAGTACTGGATGCAAAGACATATGATCAACTCTCACGGTACAGGCCATAAATGCACTTACTGTGAAAAATTGTTCATAAAAAACTCGTTTATGGTGAACCATATAAGGAGATGTCATTTGAAAGAGAAGAACGTAGAATGTTCTGTATGTTTCGAGAAGTTTTTCGATGGACAGAGGCTTAAAATGCATATGGTCAAACATGTCGGCGAAAGGAACTTTCATTGTGATATATGCGATGGTCTGCAAGGGCCGTACGAGGGCTGTACCTCTGAGCGGAGGCGGAAAAACTTGCAAACACTGTTCAACCACACCACAATAATACCATTCAAATGGCGAGGCAAATACCTCTGCTTCTACTGCGGCAAAAACTACACAGAGTACACTGAATTCAGAAAACACACCAAATCACACGGCCTCTGTACCACTAAAGACTACTCTTTAAAATTAATCAAAGGGAATCACGTGGAAATAAAAATCGATGTCTCAGAAATCTGTTGTGACATTTGTAATGAACCCTTCAGTAGATTTGAGGAAATTATCGATCATTTGATCGGTAAACACAATTTGGAATACAACAAAGACATCGATATACCGTTCCAGGAGTATCGATTAATTGATTTTCGATGTTTGCATTGTGAAGAACAGTTCTCTTACTTCGGTTATTTGGTTAAACACGTGAATAATGTCCATCCGCAAAATTGTTTTATTTGTGATGATTGCGGCGTTACCTTCAACAAAAAGAGAGACTTGGCAATACATCTGAGAAATTTTCATAAGCAGGGAGGGTATCCCTGCAATTTGTGCTTAAAACATTTCGATACTAACCACACTTTGCGTAGACATCAGAACAATATGCATTTTCGACAGTGCAAAAGTTGTGGTCTGCGATTCGCGTCCCTCTCATTGCTACAAAAGCATTTGCAAGTTGACCATTCATACAATGAAACTAATATGAAGTGTAGTTACTGTTCTAAAGAATTCCATACGTCATTAGGGGTACGACAGCACTTAAGCAAGTGTAAAGTAAAAACGATTTCCCAAATAGAGCCTAATACTTCGTTCCTGGGCGAAGCTATAGAACCTAAAAAGAAACAAAATATTTTGCAGATAAGACAAAACATACAATGTGTATTAAACATGTCTACAGCAGTACCTTTCAAATTTTTTTCAAAATACTCTTGCTTTTATTGTTCAAAAAAGTTTGTAGAATTTGACGAATTGCGTCAGCACACTGGATTAGAACATCCTATATGTGATCTGAAGTCTAAATGTATGAAGAAATGTAAAGGGGAAAGAATAGCTGTTAAGATAGATATATCAGCTTTAGCTTGCAAATTGTGCTGTCTTCCTATGTCTAATATAGAAGATTTAATAAAGCATTTGGTAACCGAACACAAAGCTAACTACGACACTTCCATCACGGGTTGTCTCGAACCGTTTCGGGTTATTAAGGATAATATACCTTGTCCTATATGCCCAGACACAGTTTTCCGGTATTTTGGAATATTGTTAAGACATATTAATTCGGAACACAGCAATAATAACAGAATCTGCGATTTTTGCGGACGGAGTTTCCGAAGCGCGGCGAATTTGAATGTCCATATCACGTACGCTCATACAGGATCGTGTGAATGCGATGTGTGTGGCGTCAAATACAAGAATCAGTGGTGTCTGGCTAGACATAGAGCAAAGAAACACAATGCCAAAGACTACAAATGCCCTCAATGCCCCGAACAGTTCCAATCTCAGTACCACAAACAGAAACACTTGATAAAAATCCATAATATCGGCCATAAATGCAGTTACTGCGAGAAAATGTTCACCAGGAACTCGTTCATGAAGGATCATGTTCGGAGGACGCATTTGAAGGAGAAAAATATTCCTTGTTCAATTTGCCACGAGAAATTCTTCGATAATTACCTGCTTAAAATGCACATGGTGAAACATAAAGGCGAAAGGAAGTTCAGCTGTAATGTTTGTGGGAAGACTTTTTTGAGACGAACTAATTTGAGCTCCCATATGGAGATGCATAAAAAGTATGGACACGTACCGATGTAG
Protein Sequence: MKTDHDNDENKCGFCNKILTTKQAFLRHASKCSAKHGTKEETIIVDDDEKKQSVKEIRDRLACIFNMTTALPFKFFMNRFRCFYCSKDFTDCQELKDHTIFTHPHCDITFKSMKLKNRYDGVQIKVDTSALSCKLCCVSLENIDHLIDHLANEHKAKCAISVESNLQSFKLIKDNFPCPICGEVYRYFGLLLKHVSARHSDNKHICMYCGKSFRGDPNLRAHVSCRHKNAGNYKCSNCDLTFPTNNALKTHLGAVHGDKIIQCSECSEKFISQYWMQRHMINSHGTGHKCTYCEKLFIKNSFMVNHIRRCHLKEKNVECSVCFEKFFDGQRLKMHMVKHVGERNFHCDICDGLQGPYEGCTSERRRKNLQTLFNHTTIIPFKWRGKYLCFYCGKNYTEYTEFRKHTKSHGLCTTKDYSLKLIKGNHVEIKIDVSEICCDICNEPFSRFEEIIDHLIGKHNLEYNKDIDIPFQEYRLIDFRCLHCEEQFSYFGYLVKHVNNVHPQNCFICDDCGVTFNKKRDLAIHLRNFHKQGGYPCNLCLKHFDTNHTLRRHQNNMHFRQCKSCGLRFASLSLLQKHLQVDHSYNETNMKCSYCSKEFHTSLGVRQHLSKCKVKTISQIEPNTSFLGEAIEPKKKQNILQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFVEFDELRQHTGLEHPICDLKSKCMKKCKGERIAVKIDISALACKLCCLPMSNIEDLIKHLVTEHKANYDTSITGCLEPFRVIKDNIPCPICPDTVFRYFGILLRHINSEHSNNNRICDFCGRSFRSAANLNVHITYAHTGSCECDVCGVKYKNQWCLARHRAKKHNAKDYKCPQCPEQFQSQYHKQKHLIKIHNIGHKCSYCEKMFTRNSFMKDHVRRTHLKEKNIPCSICHEKFFDNYLLKMHMVKHKGERKFSCNVCGKTFLRRTNLSSHMEMHKKYGHVPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01377706;
90% Identity: iTF_01377706;
80% Identity: -