Smeg005349.2
Basic Information
- Insect
- Subacronicta megacephala
- Gene Symbol
- Lrrfip1
- Assembly
- GCA_958496365.1
- Location
- OY292517.1:1538377-1552558[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 1e-44 1.5e-40 140.1 6.6 1 116 121 233 121 235 0.98 2 35 2 2.9e+04 -5.4 2.5 132 161 323 352 318 360 0.49 3 35 2 2.9e+04 -5.6 6.6 121 171 380 431 372 453 0.61 4 35 0.68 9.9e+03 -3.8 1.2 131 161 463 493 456 503 0.55 5 35 1.1 1.6e+04 -4.5 1.7 131 161 517 547 512 556 0.51 6 35 1.1 1.6e+04 -4.5 1.7 131 161 571 601 566 610 0.51 7 35 1.1 1.6e+04 -4.5 1.7 131 161 625 655 620 664 0.51 8 35 1.1 1.6e+04 -4.5 1.7 131 161 679 709 674 718 0.51 9 35 1.1 1.6e+04 -4.5 1.7 131 161 733 763 728 772 0.51 10 35 1.1 1.6e+04 -4.5 1.7 131 161 787 817 782 826 0.51 11 35 1.1 1.6e+04 -4.5 1.7 131 161 841 871 836 880 0.51 12 35 1.1 1.6e+04 -4.5 1.7 131 161 895 925 890 934 0.51 13 35 1.1 1.6e+04 -4.5 1.7 131 161 949 979 944 988 0.51 14 35 1.1 1.6e+04 -4.5 1.7 131 161 1003 1033 998 1042 0.51 15 35 1.1 1.6e+04 -4.5 1.7 131 161 1057 1087 1052 1096 0.51 16 35 1.1 1.6e+04 -4.5 1.7 131 161 1111 1141 1106 1150 0.51 17 35 1.1 1.6e+04 -4.5 1.7 131 161 1165 1195 1160 1204 0.51 18 35 1.1 1.6e+04 -4.5 1.7 131 161 1219 1249 1214 1258 0.51 19 35 1.1 1.6e+04 -4.5 1.7 131 161 1273 1303 1268 1312 0.51 20 35 1.1 1.6e+04 -4.5 1.7 131 161 1327 1357 1322 1366 0.51 21 35 1.1 1.6e+04 -4.5 1.7 131 161 1381 1411 1376 1420 0.51 22 35 1.1 1.6e+04 -4.5 1.7 131 161 1435 1465 1430 1474 0.51 23 35 1.1 1.6e+04 -4.5 1.7 131 161 1489 1519 1484 1528 0.51 24 35 1.1 1.6e+04 -4.5 1.7 131 161 1543 1573 1538 1582 0.51 25 35 1.1 1.6e+04 -4.5 1.7 131 161 1597 1627 1592 1636 0.51 26 35 1.1 1.6e+04 -4.5 1.7 131 161 1651 1681 1646 1690 0.51 27 35 1.1 1.6e+04 -4.5 1.7 131 161 1705 1735 1700 1744 0.51 28 35 1.1 1.6e+04 -4.5 1.7 131 161 1759 1789 1754 1798 0.51 29 35 1.1 1.6e+04 -4.5 1.7 131 161 1813 1843 1808 1852 0.51 30 35 1.1 1.6e+04 -4.5 1.7 131 161 1867 1897 1862 1906 0.51 31 35 1.1 1.6e+04 -4.5 1.7 131 161 1921 1951 1916 1960 0.51 32 35 1.1 1.6e+04 -4.5 1.7 131 161 1975 2005 1970 2014 0.51 33 35 1.1 1.6e+04 -4.5 1.7 131 161 2029 2059 2024 2068 0.51 34 35 0.87 1.3e+04 -4.2 1.4 131 161 2083 2113 2078 2123 0.51 35 35 2 2.9e+04 -5.8 8.4 122 169 2196 2243 2187 2256 0.49
Sequence Information
- Coding Sequence
- ATGGGACAACGCTCTGAAGTGGCCACGCCTGACAATAGCGATGAGGAGAGCGGCGATGTTTTTACTGACGGAGATTTTGGGGATTCCGAAGATGATACGATCGTCGAACGTCATGATGAGGCTAAAACTTCACACATACCCGTCAATGAATCTGTGAATGAAGATATTCAGATTAATGCCGCTACGAATAGTCACTCTAGTGTAGAAGAGCACCCCAGAATTAATGGTCGTAAGAACAGTGAGATCAGTCAATCGAGTGATGTGGAACACCAAAGCTTAGTATTATCAGATTTGCGCAGGGATTCACACGGCGATCAGAATCCTTCAATAGTGGGAATTCTTGGCGATCAGCAGAATCATGCGGAACAGCGATTAGCAGCGCGTCGGGCGGCGCGAGCGGAGGCGCGTGAGATACGCATGCGCGAACTAGAGAGACAGCAGCGCGAACAGGAGGACCATGCGGACAAAGCATACGATATGTATGCGGGTAAAACACCAGAGACAGTGGGTCGTCGCGGAGGCACGCGGCTGGCGGCGCTCAGTCCGGCCGGCGTGCACTCACCACGACGCAGCTCAGAGGACTCAGTCGATGACGGCTTCAGCATCAAAGATCTTAGGCATGAGCTGAAGGAGGTAGAGGAAAAGTTTCGTAAGGCGATGATCCTAAACGCGCAGTTGGATAATGACAAGGCGGCGCTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGTACTGCACTCATGTCACTCTACTGATATCATACTCCTGACGCGAGGCCGAGGCGGGCTGCAGGCCCTCGAGGCGCAGCTGGCGCGGCTCCGAGCACGCCACGCGCACCAGGACGAGCACGAGGAGCAGCTCAAGCACGAGCGCCGCCGCCTGCAGCGCGAGGCTCGGGAAGCACTCAACCGGGTTGAAGAGTTGGAGACAGAAAACAGCCACCTGACGAAACGACTAGACAAACTCAAGAACGCAAAGTCCGCGCTGTTGAAAGATCTGTGA
- Protein Sequence
- MGQRSEVATPDNSDEESGDVFTDGDFGDSEDDTIVERHDEAKTSHIPVNESVNEDIQINAATNSHSSVEEHPRINGRKNSEISQSSDVEHQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKTPETVGRRGGTRLAALSPAGVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREVLHSCHSTDIILLTRGRGGLQALEAQLARLRARHAHQDEHEEQLKHERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -