Basic Information

Gene Symbol
Xbp1
Assembly
GCA_958496365.1
Location
OY292517.1:2593096-2595118[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.1 5.7e+03 -1.9 0.0 16 25 33 42 32 43 0.80
2 3 6.7e-18 7.5e-15 55.4 10.0 2 62 47 107 47 110 0.94
3 3 0.00015 0.17 12.6 0.7 33 59 92 118 92 123 0.88

Sequence Information

Coding Sequence
ATGAGCGCTCCTATTATCATCACGGTGCCCAACAATTACCTGGCTATGGAGGCGGTTGAGGAGTTGGAGTCGAAGGTGGTAGTGGACCTGCCGTCTCCCACATCTTCAAGGAAGCGCCGTCTCGACCACCTGTCATGGGAGGAAAAGATGCAAAGAAAgaAGCTGAAGAACCGCGTAGCGGCTCAGACCTCGCGCGACAGGAAGAAGGCGAAAATGGATGAAATGGAGAGTCGGATAAAACACTTTATGGACATGAATGAACGGTTGACAAGCGAGGTGAAGAGCTTGAAGGCGTTGAACGAGCGTTTGTTGAGCGAGAATGCTTCGCTGCGCAGCGAAGCGGCGGCGGCACGGAGCGTCGCGGCGGCCCCCAGACCAGCAGAGTCTATTCCTCAGCAGAAGGAAGGGGCCCCGACGGCGATCCGTGCGGCACGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACTTCGACTCAGAAGAGTACCTCGAAACCCTCACTCAACTTGCAGACTCCCTCCTCAAAGAAATTGATCCAAGTGCTGCAGGAGCGCCTCaaaatGACTCAGTCAGGAAAACTGGAGAGTGCTCTGAAGGAGCTAAAGTGGATACTGTCTCAACATTCCTATGCGCATCCTTACAAACCAGAGATAGTTGTCACCGATATAGATGAAGTACAAATTAAAGAAGAGAACAATGACAAAGGCGACATATTCTACGCCAGCTGTGATGAAGCGAATGACTGCATCACCATCGAAGTTCCATGTGAAGAACATGTTGTAGAAGACACACCTTTACAGTTAGAAACCGACTTTACAGATCTGACGGACGATTGTTCAGGAATCACATTGGAGTGTGACATGAAAATGCTGTCTCCTATGACAATGTCACCCAAATCTGTAGAGGAGAACCTAGGGTTGTCACCTTCACACACCATCATCAGCTCTGACCTGGGATACGAGTCATTAGCCTCACCGCTCAGTGAGCCCGAATCTATGGACTTGTCAGACTTTTGGTGTGATTCATTTTCAGAATTATTCCCTGGTCTAGCATAG
Protein Sequence
MSAPIIITVPNNYLAMEAVEELESKVVVDLPSPTSSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKHFMDMNERLTSEVKSLKALNERLLSENASLRSEAAAARSVAAAPRPAESIPQQKEGAPTAIRAARLLLAMCLLSQTSSHTSTQKSTSKPSLNLQTPSSKKLIQVLQERLKMTQSGKLESALKELKWILSQHSYAHPYKPEIVVTDIDEVQIKEENNDKGDIFYASCDEANDCITIEVPCEEHVVEDTPLQLETDFTDLTDDCSGITLECDMKMLSPMTMSPKSVEENLGLSPSHTIISSDLGYESLASPLSEPESMDLSDFWCDSFSELFPGLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01221232;
90% Identity
iTF_01221232; iTF_00000922;
80% Identity
-