Basic Information

Gene Symbol
Xbp1
Assembly
GCA_950381575.1
Location
OX494436.1:13380272-13382137[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.6e-18 6.3e-15 55.6 9.9 2 62 47 107 47 110 0.94
2 2 6e-05 0.058 14.1 0.7 33 59 92 118 91 123 0.88

Sequence Information

Coding Sequence
atgagCGCGCCTATAATCATCACTGTGCCCAACAACTACCTGGCGATGGAGGCCGTCGAGGAGATGGAGTCAAAGGTCGTTGTAGACCTGCCGTCCCCGGCGCCGTCCAGGAAACGCCGCCTGGACCATCTGACATGGGAGGAAAAGATGCAAAGAAAGAAGCTGAAGAACCGAGTAGCGGCTCAGACTTCCCGCGACAGGAAAAAGGCGAAAATGGATGAGATGGAGAGTCGCATCAAACACTTTATGGACATGAACGAGCGTCTGACGAGTGAGGTGGAGAGTTTGAAGGCGTTGAACGAGCGTCTTTTGAGCGAGAACGCGTCGCTACGCAGcgaagcggcggcggcgcggacCGTCGCGGAGGCCCCCAGACCAGCAGCGTCTATTCCTCAGCAGAAGGAAGGGCCTCCGCCGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCACAGACCTCCTCGCACACTTCGACTCTGAAGAGTATCTCGACACCCTCACTCAACTTGCAGACTCCCTCCTCAAAGAAATTGATGCAGGTGCTGCAGGAACGCCTCAAAATGAGCCAGTCCGGGAAGCTAGAGAATGCATTAAAGGAACTGAAGTGGATATTGTCACAACATTCCTATGCGCATCCTTACAAACCAGAGATTGTCATCACTAACACAGATGAAGTAcaaattaaagaagaaaacaatgACAAAGGAGACATATTCTATGCAAGCTGTGATGAAGACAACGACTGTATCACGATAGAAGTGCCATGTGAGGAACATGTTGTGGAGGAAACACCTCTACAGATTGAGACGGACTTCAACACCCTGACAAACAATTGTTCAGGAATCACACTAGAGTGTGATATGAAAATGCTCTCTCCTATGACGTTGTCCCCTAAATCTGTAGAGGAGAACCTCGGCCTGTCCCCATCGCACACAATCCTGAGCTCAGACTTGGGCTACGAGTCGATATCATCACCACTCAGTGAGCCAGAATCAATGGACTTGTCAGATTTTTGGTGTGAATCATTTTCGGAATTATTCCCTGGTTTAGCTTAG
Protein Sequence
MSAPIIITVPNNYLAMEAVEEMESKVVVDLPSPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKHFMDMNERLTSEVESLKALNERLLSENASLRSEAAAARTVAEAPRPAASIPQQKEGPPPAIRAARLLLAMCLLSQTSSHTSTLKSISTPSLNLQTPSSKKLMQVLQERLKMSQSGKLENALKELKWILSQHSYAHPYKPEIVITNTDEVQIKEENNDKGDIFYASCDEDNDCITIEVPCEEHVVEETPLQIETDFNTLTNNCSGITLECDMKMLSPMTLSPKSVEENLGLSPSHTILSSDLGYESISSPLSEPESMDLSDFWCESFSELFPGLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01377212;
80% Identity
-