Basic Information

Insect: Stratiomys singularior
Gene Symbol: -
Assembly: GCA_954870665.1
Location: OX940881.1:93493285-93498367[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.3e-05 0.01 17.4 0.8 1 23 160 182 160 182 0.97

2 15 0.00079 0.13 13.9 2.9 1 23 188 210 188 210 0.97

3 15 0.00059 0.097 14.3 0.1 1 23 299 321 299 321 0.98

4 15 0.0089 1.5 10.6 1.2 1 23 327 349 327 350 0.96

5 15 9e-06 0.0015 20.0 4.2 1 23 377 399 377 399 0.98

6 15 0.014 2.3 10.0 0.0 1 23 411 433 411 433 0.94

7 15 0.09 15 7.4 0.3 1 23 439 462 439 462 0.85

8 15 0.088 15 7.5 1.2 2 19 470 487 470 488 0.95

9 15 2.7e-05 0.0045 18.5 4.6 1 23 497 519 497 519 0.96

10 15 0.008 1.3 10.7 0.6 2 23 525 546 524 546 0.97

11 15 2.3e-06 0.00038 21.9 0.3 1 23 554 576 554 576 0.98

12 15 0.0015 0.25 13.0 0.2 3 23 584 604 582 604 0.97

13 15 4.6e-05 0.0076 17.8 0.5 1 23 610 632 610 633 0.95

14 15 0.0042 0.69 11.6 0.1 1 23 647 669 647 669 0.97

15 15 0.0009 0.15 13.7 0.3 1 23 1088 1110 1088 1110 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.3e-05	0.01	17.4	0.8	1	23	160	182	160	182	0.97
2	15	0.00079	0.13	13.9	2.9	1	23	188	210	188	210	0.97
3	15	0.00059	0.097	14.3	0.1	1	23	299	321	299	321	0.98
4	15	0.0089	1.5	10.6	1.2	1	23	327	349	327	350	0.96
5	15	9e-06	0.0015	20.0	4.2	1	23	377	399	377	399	0.98
6	15	0.014	2.3	10.0	0.0	1	23	411	433	411	433	0.94
7	15	0.09	15	7.4	0.3	1	23	439	462	439	462	0.85
8	15	0.088	15	7.5	1.2	2	19	470	487	470	488	0.95
9	15	2.7e-05	0.0045	18.5	4.6	1	23	497	519	497	519	0.96
10	15	0.008	1.3	10.7	0.6	2	23	525	546	524	546	0.97
11	15	2.3e-06	0.00038	21.9	0.3	1	23	554	576	554	576	0.98
12	15	0.0015	0.25	13.0	0.2	3	23	584	604	582	604	0.97
13	15	4.6e-05	0.0076	17.8	0.5	1	23	610	632	610	633	0.95
14	15	0.0042	0.69	11.6	0.1	1	23	647	669	647	669	0.97
15	15	0.0009	0.15	13.7	0.3	1	23	1088	1110	1088	1110	0.97

Sequence Information

Coding Sequence: atgaaTGTGTCGGGATTTCGTATTGAGTGGGTAGAAGAAATTCCATCTGCCGAAATAGTTAGCGAAGAGGTAATCGGAATGGACGGCAATGGCAACGAAGAGGTGGAAGGTGCCGAAGAATATTTGGTTGGCGAAGAGATTATATCGTCCGTGGACATGAACTCATTGCCCAACAGTTTAGATCAGGTAGCAGCTGAAAATCTAATTTATATGGCCCACGATGGACATGTTCAAGCCATGGGTGATCTGATCGAGGAACAAGTGGAGGAGACGGACAATGCAAATTACAATGAAGTACAATATTTTGAGTGTCAAGTGACAGAAGAggtgataacagatgattggGTACAACAACAAGGGGAAGAAAGAGTTGAAATTCCCGTGGACCAGCTTTGCAGCTCGACCGACAATCAAATTGTGACGGAAATAGAAGTTCCACTGCCCACTGACCAGGATGAATACACAGCGCTGCGGCCATATCCTTGTGATTTTTGCAGTCGACGTTTTCGAAAGAAAGTCAGCTTAATGAATCATATGATCGCGCATCAAAACGATCGTCCGCATGTTTGTAACTTGTGCGGCGCCCGTTATATTCGACGGAGTGATTTGCATAATCACTTTAAAGTTCATGCACACATGCCAGAACAAAATTTCGATGATATCGATGAAGCTTTTCTCAATGAACACATTGAAATCAAACAGGAATCGAGAGGTCATGAGTACTACGAACAAGAGCAAATTGAATCGAGACCGGCAGCAAAGGGTCGCAATCGCGGCGGTGGTCGTCGAAAAGTCAAAGAAGAAGAACGTTATGCACATGTCGAGCAATCAATTGAGGAACCACAAATGCCAGAGCCAGTCGAACGGTATCCGGTTACAGATCCTAGAAAGCCATTTGTATGCCAACAATGTGGAGTGGGTTTTGCTCGGGAAAAGGCTTTACTTTCCCACTCACGGATTCATGGTGGCGATTCGCCGTACGAATGTACATCGTGCAATGAAATGTTCTGGGATATTAACATGCTGAACGATCATCAAAGGACACATCACTTTGAAGCGAGCAATTCGGAGTACGAACCTGAAAACGACGAAGAAACTGATTCGGACAATGATTCCAAGTACGGTGAATTTTATTGCAACATTTGTGGAATGTCGTTTCATCGTAAAGATTTACTGAAACGCCACTCGAAGACACacgttaaaaaagaaattagcGAGGCCGATTCGAGGCATGCTTGTAACGTGTGCGGCGAATCATTTCAGGAAGCATTAGATCTCCTGGCGCATGCCGAAGTTCATGCCCGTTTTCAGCCGTTCAAATGTACACTGTGTGGTGAAACATTTCTGGAAGAAGCTACAATTAAAAAGCATTTAACCAACGTGCATTCATCTGATATGAACTCCAATTCGTGCAAGTTGTGTGGGAAGCAATGTCGCGATGGTCGATCGCTAATGAAACATGCCTGGGATCATTCATTGAAAAAGAACCATTCGTGCTCGATATGTGGGAAAACGTTTCACAATAAAGCAAGaCTAAAACGCCATATGGTGTCGCATCGCAATAAATCTGTCCGATGTGATGTTTGCAATGAAGAATTCCCGGACGGTCGAAGTTTGATGAACCACCGACATTCGCATAATAACACATCTGGTCGACAATTTCCTTGTAACGAATGCGGAAAAACATTCGGCTCGAGAAGTTCACAACAAATTCATATACGCATCCACACCGGTGAACGACCCTATGGATGTCGATATTGTTATAAGGCATTCGCCGATGGTGGAACATTAAGGAAACATGAACGTATTCATACTGGTGAAAAACCATATGCTTGTTCAGTATGTCCCCGAGCTTTTAACCAAAGAGTTGTTCTTCGCGAACACATTCGCTCGCATCACTCAGCGCCAGATACCAAAAGAGGCACGTCCTCATTGCCATACTATTGtactgtatgttctgaaatgtTTGCAGCTTCAACCGAATTAGTTCAACATTTAATACAGCATAGCGATTTGAATACAGCAATGCAAAGACAGCCTGTGACAGGACCACGAAAATACAAACGTCGACGCAACTTGAAACCGCACGAATTGGAACGATTGCGCGTGGAGAAATCGCAAACAAGTGAAGCGGAATATTCGGATCTGGATATGGGCAATGATGATGATTTGCTTGAAATAAGTCGAGCGAAACGTTCACCGCTCGAGCtaatgtcgtcatcgtccaCATACGGCACAACATTTGGCAATCAACTTTCAAATCGAAGTCGTAAATATTCAGCAGGATCTGATAAGGTAGCGAGTTGGCAGCAGAAACTAATGTCTACGAATGATTCGTACACAGAATTAAATAGCCTTGAcaatgatattaaaaatatcGAGCCATTAGTTGTTAATAATACATCCATACAATCACCTCTATCGACACCCCAGGTTGGTACAACAACAAAAGCGAAAGGCGGCACGAAACGTCGCGCGACCGCTAAACAAGAAGCTGAAAAGCCATCGCGACCGAAAATGATTCACACGCAAAAAACACGAGTAGCCGCTGAGGATGGCAAACGACGAAGTAGAACTATGATAACACGAACTGAACCAGCCGAAATCGATGAGCAAGTCTTCCAGAATTTCGATCGACCGAAAACGGGTAGAATACGCGACAATAGTACAAGCGACTACGAATTCGGTAGTTTAGTTCGATCGCCCGACATTTTGCTGCAAAGGAATTCTAGTCAGGCGGCTGAAATCAAGCAGGAAGAGGTGGCGCGAAATGATTTATATAATGCTCAACTTCTCCTCGAGGCAGCTGCCATGCGAAAAGGCTACGAAAAGTACAATCCTGATGTTGTGAACGATCTGGATGAGATTTTACGCTCGCCGGTGAAATCAAAGGCATCGCCGTCGCCGCAAAGTTCATTTGTTACCCAAACATCATTGGAGGCTACGCCACCCGATCCGACCGACAACGTCAACTCCGGCGATGAACTACGACGTTCGGCGCGCATCAAGCGCTcgtcgaaaaataaaaagtatctCGATTTTGAAACAGAATCCAAACTATCAACTGGTGGAGGAGCGCAACGTACTTCGTCATCACAATCCTCGTCAACGTTGTCGAAATCCAGGTATGCTAAAGACACAAAAGCTGATGTGAAAAGCGATGCCACCAATGACAATGGCGACGTTAAAAACGAATTACTTATGCCCGATCATATGATGAACGAACAACTTGACAATCATCAAACAGAAAGGACGCAATATTTTCAGTGTGAAATGTGCTTTGCAACGTTCCCAGATCGTGCACAATTGCTCGTACATGTTCACATTCACATTTGA
Protein Sequence: MNVSGFRIEWVEEIPSAEIVSEEVIGMDGNGNEEVEGAEEYLVGEEIISSVDMNSLPNSLDQVAAENLIYMAHDGHVQAMGDLIEEQVEETDNANYNEVQYFECQVTEEVITDDWVQQQGEERVEIPVDQLCSSTDNQIVTEIEVPLPTDQDEYTALRPYPCDFCSRRFRKKVSLMNHMIAHQNDRPHVCNLCGARYIRRSDLHNHFKVHAHMPEQNFDDIDEAFLNEHIEIKQESRGHEYYEQEQIESRPAAKGRNRGGGRRKVKEEERYAHVEQSIEEPQMPEPVERYPVTDPRKPFVCQQCGVGFAREKALLSHSRIHGGDSPYECTSCNEMFWDINMLNDHQRTHHFEASNSEYEPENDEETDSDNDSKYGEFYCNICGMSFHRKDLLKRHSKTHVKKEISEADSRHACNVCGESFQEALDLLAHAEVHARFQPFKCTLCGETFLEEATIKKHLTNVHSSDMNSNSCKLCGKQCRDGRSLMKHAWDHSLKKNHSCSICGKTFHNKARLKRHMVSHRNKSVRCDVCNEEFPDGRSLMNHRHSHNNTSGRQFPCNECGKTFGSRSSQQIHIRIHTGERPYGCRYCYKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSAPDTKRGTSSLPYYCTVCSEMFAASTELVQHLIQHSDLNTAMQRQPVTGPRKYKRRRNLKPHELERLRVEKSQTSEAEYSDLDMGNDDDLLEISRAKRSPLELMSSSSTYGTTFGNQLSNRSRKYSAGSDKVASWQQKLMSTNDSYTELNSLDNDIKNIEPLVVNNTSIQSPLSTPQVGTTTKAKGGTKRRATAKQEAEKPSRPKMIHTQKTRVAAEDGKRRSRTMITRTEPAEIDEQVFQNFDRPKTGRIRDNSTSDYEFGSLVRSPDILLQRNSSQAAEIKQEEVARNDLYNAQLLLEAAAMRKGYEKYNPDVVNDLDEILRSPVKSKASPSPQSSFVTQTSLEATPPDPTDNVNSGDELRRSARIKRSSKNKKYLDFETESKLSTGGGAQRTSSSQSSSTLSKSRYAKDTKADVKSDATNDNGDVKNELLMPDHMMNEQLDNHQTERTQYFQCEMCFATFPDRAQLLVHVHIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01127736;
90% Identity: -
80% Identity: -