Ssin007812.1
Basic Information
- Insect
- Stratiomys singularior
- Gene Symbol
- spopl
- Assembly
- GCA_954870665.1
- Location
- OX940877.1:136666220-136674653[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.016 9.6 7.6 0.0 5 31 137 163 133 195 0.82 2 4 5.2 3.1e+03 -0.5 0.0 65 88 350 375 345 380 0.77 3 4 4.3e-17 2.6e-14 54.5 0.0 21 107 825 912 822 915 0.95 4 4 0.69 4.1e+02 2.3 0.0 78 109 915 946 910 947 0.87
Sequence Information
- Coding Sequence
- ATGGCGGTTGAGCATTCATTTTTCGGGACTTGGGAAATCGTAAGCTGCTCGTTTGAAGGCAAACAAGAGGTGTCTGGCTTAGAAGGgataaaaTTTCGATTGGATGAGACAGGTGACATAACGTGGTACAATGATCTCATTAACCCTTTTCCCGACTCGAAAGACTGTGATAGTTGCTGCGAATCTGCTACAGTACTTTTTAGTTGTGAAACTTTTGATGTCAATGAGCTCAACCCCAGGTTAATATTTGGTGCGTTCGCAGGACATAGCATAGAATTTAAGACATATACATTAATGCCAGCGGATACCTTGGTGCTAGAATGCGAGAATTGGTATTCACTGTTATGCAAACGCCTTAAGGATGATGAAGCCGTGGGGCAAGAGAAAGAATTTACGTTTATTGATGCGTTATCCGAAGGCTACTTTAGCGACGTTATCATTAAAAGTTCAGATGGAATTGATTATCATGTTCACTCTGCAATATTACGACTGAATGGGTTCGATTGCAGTATGTACTGTCAGACAGCAATTACCAACGCACCAGCGGCTTATACTGGCAAACTTAAAACATCGCCTACGCAGACGGCCGCTAATAAGGTTAAAATTTCCATAACCATCCCCAAAACAATAGAACCCAGCGTATCCCAAGACCACCAGAAGCATTATCCGAAATTGAATCTTTCGCCGATACATTTACTGCCACCCTCAGAATCGAACGGCGGAATGCATAAATCGAACAATCTCTCCAGCTCGTTCAATTGTTTGATGGCCTCGAATGGAGAGCAGCAGCCTTCGGATAGTCCCATAAAAAAGCATCCAATGTCCTCATCCGATTCCAATCTACAATCAACATCcagcagaaatattttcaatttctcgaacgatctttttttaaatccagttgaaaatatttgcagtaATCGTAAACCTCCGCTTTCACCATATCGTGCTCGTAGTCCGTCTCCTTTTCCTAGTTCTTTAGACACGCCGCCTTCGTCACCACTCACTCCACTGGGCATACTCTACAATCTTCCCTCCTTCATGCTGACTCCGATTCTCCATTGGCTTTACACAGAATCACTAATGCCGAATATGGAAGAAGAAGCGTGcgaaaaactgataaatttCGCCGAAACTCAACCACCACTGATAAAAATGGTGGAGCCATGCAGAAGATATTTGAAGTTGATACGGTTGAAGAAATTTGTCATTGATATTATCATGGACATGCACGATGTTCTCAACAAAGTTATTCAGTCTATTAACCCAGCTACAATATCCACACAACCCGAAATGTTATTCAGCACATTTAAGGATGCTATTAGGGAAGGTGCAGTAGGTTGTGCCAAGATCTTACAATTCTGTAATATATTTGTGAGAGATGCAACCGATATATCTCGTTACCAAAAAcatgaaatcattaaatatgTTCGAACACGAGTACCAATCTTTTTGTCTCAGTTTCATCaactcttaaaaaatattttaaacgtaTTCATAAATCTAAGCTCAGACGAGAAATTGGAGCTCGTTATTTATCTAGTACCTGAGATTGaatcttcattgaaaatttcaacaaatgtgATAGCAGAAATCAAAAATTCGCTTGAAAAAATGTGCAAAgACTTAAAATGCTCACATTTAGACTTATCAACCAAATTCGATAACGATAGCCCGTACACAGTGAACATAACAACAAGCGCCATGAATCAAGGAATTTCTGAAGAAATGAATCAAATATCGTTCAGTCGTCAACCACAGTCCGTGTATGGTATGCCTAGGGAAAAGCGATTGATAACAGCAGAAAATGatttaaagtttgttttatatatgtatgaagTTCGTAAAATGAGAGACATATATGGACGAATAGCAACAGCATCCGAAATTATCAAggagaaaaaaTCCGCATTTTGTGATATGAGCCTAGCAAACAAACGAAGTACAATTCGACAAAATCTTGAGCAGCTAATTTTAGATATTCCCGCCTATATtctaattgttgaaaatatatcaGATCGTTTGGATGATCGAATCGGTTggaaagaatttaaattttgttttaagcttGCGACGAGCCAAATAaacgGTGTCATTATAAAATTGTTGGATCACAAGCCAGCATTACGCGATCCCATTAGTCATATATGCAAATTAGTTCAAAAAGATGAATTCACCAAGTCGTTGATAGAACTGGGACTTTTGGAGCCGACAAACATACTTCAAAATGACATACAATTGACGCCGAAATCAAACCCGTTGGATTACAAGATCGTGAAATTAAACCTCATTAAAAGTTTATGTGAGCCGCCCATCGTAGCCAATAGTAGTTTATCAAAGAATTCTCTACGTTTATTGCATTCTGGTCAATTAGCTGACATGGAATTCGAAGTTCATGTTTTGCACAATAGCACTAACGAAAAGGGTAGCAAAATTAATGACTATGAATCAATTAGTCGACCCAGTCAAGTTCATACATTTCGTGCACATCGAGTTATAGTTTCAGCTAgATGTGAATGGTTCAAAAAAGCATTATTATCCGGAATGCAAGAAAGTATCAATAGaaaaattgttATATCTGATACGTCACCTGTGATATTTAGACGATTATTACTATATTTATATGGAGCGCCGATAGATAAAACCGTAGGAGCTGAACAAATTTGCGAATTAATGCTTCTAGCTGATCGTTATTCAATCGATGATTTGAAGGAACTCTGCGAAAACACATTGAACGCGTTGATCGATGAAGACTCAGTATTGTGCTTGCTAGGAATTGCAGATCGATTTCGAGCAACTGCTTTGAAATCGAATTGTTTATCATTCATATCACAACACTCCAGCCTAACAAAAGTGGATATGTTTCGGGAATTGCCTAGAGCTATACAGCTTGAAGTGCAAGATCTAATACACTGGTTCGGTCGGGTTGCAGAACCGTGGACTGATGGATTCAAATCTCGTAGTAGTTCAAGACACAGCTTGAAAAGTCCTTCAAAACAAAGATCACGATCTCGGAAATCATCTCCATCTTTGATGTGA
- Protein Sequence
- MAVEHSFFGTWEIVSCSFEGKQEVSGLEGIKFRLDETGDITWYNDLINPFPDSKDCDSCCESATVLFSCETFDVNELNPRLIFGAFAGHSIEFKTYTLMPADTLVLECENWYSLLCKRLKDDEAVGQEKEFTFIDALSEGYFSDVIIKSSDGIDYHVHSAILRLNGFDCSMYCQTAITNAPAAYTGKLKTSPTQTAANKVKISITIPKTIEPSVSQDHQKHYPKLNLSPIHLLPPSESNGGMHKSNNLSSSFNCLMASNGEQQPSDSPIKKHPMSSSDSNLQSTSSRNIFNFSNDLFLNPVENICSNRKPPLSPYRARSPSPFPSSLDTPPSSPLTPLGILYNLPSFMLTPILHWLYTESLMPNMEEEACEKLINFAETQPPLIKMVEPCRRYLKLIRLKKFVIDIIMDMHDVLNKVIQSINPATISTQPEMLFSTFKDAIREGAVGCAKILQFCNIFVRDATDISRYQKHEIIKYVRTRVPIFLSQFHQLLKNILNVFINLSSDEKLELVIYLVPEIESSLKISTNVIAEIKNSLEKMCKDLKCSHLDLSTKFDNDSPYTVNITTSAMNQGISEEMNQISFSRQPQSVYGMPREKRLITAENDLKFVLYMYEVRKMRDIYGRIATASEIIKEKKSAFCDMSLANKRSTIRQNLEQLILDIPAYILIVENISDRLDDRIGWKEFKFCFKLATSQINGVIIKLLDHKPALRDPISHICKLVQKDEFTKSLIELGLLEPTNILQNDIQLTPKSNPLDYKIVKLNLIKSLCEPPIVANSSLSKNSLRLLHSGQLADMEFEVHVLHNSTNEKGSKINDYESISRPSQVHTFRAHRVIVSARCEWFKKALLSGMQESINRKIVISDTSPVIFRRLLLYLYGAPIDKTVGAEQICELMLLADRYSIDDLKELCENTLNALIDEDSVLCLLGIADRFRATALKSNCLSFISQHSSLTKVDMFRELPRAIQLEVQDLIHWFGRVAEPWTDGFKSRSSSRHSLKSPSKQRSRSRKSSPSLM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01088645; iTF_01127612; iTF_00793643; iTF_00999779; iTF_01043993; iTF_00322682;
- 90% Identity
- iTF_01088645;
- 80% Identity
- -