Basic Information

Insect: Stratiomys singularior
Gene Symbol: -
Assembly: GCA_954870665.1
Location: OX940881.1:1860274-1868770[-]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.1e-11 1.7e-07 31.9 0.0 6 71 203 264 200 267 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.1e-11	1.7e-07	31.9	0.0	6	71	203	264	200	267	0.85

Sequence Information

Coding Sequence: ATGGAGGCAGAGTCTTTTGATGGTGGGTATGAAATAGAAAGTACGACAAGTGAAAGTTTGAGCCTACTACCGGCCACCAAGCTAGCGCAAGCCGACGAGCAAACAGAGCCTATGAGGCTGGCCGTAACCTCCGACGAAGATACAAGAGAGTCAGCCAAAACGTCGGATAAATTGAATCAACCATTGGAGGTTGCAggtattgaagaaaaaactgcGGATAGGAGGACGGTGCCGAGTGATGGTGCTGCAATGACAGACGGAGGTTCGCCAGCTAATGCTGCTGTCAAACGAAAACGAGTCGATCTGGATTGGTCGAGTGACGAGGAGGATTTCGCGGGTTTCGAAGATTGTAATGGCGATACGAGTGAAAACTCCCATAAAAGGATAAAAGAGGAAATACAGTCTGAAAACGAACTAGAAAATGAAGTTGTAAAGCCTGATAACATGCGAATAGAGCAGGCCGTAAAATCTGAAATGGAGGAGCAAGGTGACGAGAATAAACCACCCGATACAATCTCCACGGACATTTGCGAGAAAATAGGTCTTGACGAAAAATCAGCCGGTTCAATTTCGAGTCATACAAAGCAGCGCTCCATTAAAGATTCAGTTTATAAAAAGCCATTCGCGTTGGGCTGGAAGCGAGAGTTAGTTTATCGTGCGATACCTGGTGTGAGTAAAGACAAGGGAGAAGTCTACTACATTACGCCCCTGGGGAAAAAAATTCGCACAAAAACTGACTTGCAGATGCATTTGTCTGGTGAGCTGCAATTAGAAAACTTTACTTTTGCTCGGGAACCGATTGGCATGAGTTCTGAAGAAGAAATGATTCGTGTGGCAAAGCCTACGGCAAGGACAACACCGGCAGAAACGCCACTAGGAAAGAGAATTCCAAAAccgaaggcaccaaaaggcgCCAGTCCACCTCCTCAAGGATGGACTCCAGCACGGGCGGTAAAATCGTCTGCTGCGAGCTCACCTCGTCCAATACATTCAACCCGAGTCTCAGATGAAATAGAAGCCAAGCCACAGACTAatccaaaatcttcaaaaatgagCAAACCGCAGAAAAAAGGAGAGCCATGCTCCATAGAATGTGTATTAGCAATGGGAACAATACCTCAGCTGCAATGCACAAAATGTTTGTGTTTGTATCATCATGAATGCATTGCCGCTGATGCAAATGGGGGAAGTGCGGAGAATAGAGGCAGCTCGAAGGCAGGATCGGCTCGAAGCGAGGGAGGGTACATTTGCGAGCCGAAACCCTCACAACATAGTCCTCCAAAAGGAAACCAGCATAATATAGGAAGTTTGTTGCGACGCGAGAGCGATAATGCGAAAGAcgcaaacaaaacacaaatatcTTCTTCGTTGGTTGGTAACAAATCTACAAATAATGGGATGAAAACATCTGACAATCATACAATAGTTGATACAAATACTACGCTACCACAGTCGATAGCTGTTATAAAAGGACGAAAATATGTTGTGATTCGCAAGCCGAGCACTTCTCATCATGAAAACAACACAAAAGATGCAGCGAATGAgAATTATAGCGTAAATCAGTCGTCAGTTTCATTGACAACAGGCGATGATAATCAACTTCGAAAACGTGGAACTAGTGCAAGATCGTCTAAATCGTCGGCCGATAATATTCAAGTGATGGATTCAAGTCATCAAACAATGGACAGACGGCAACCGCCCGCTTTATCAGTACATTCGGATCATTTTGCAATGCATTTCTTCAACAATGTATCTATTGGCTATCAAATTTTGTTACAAACGTTCCAGTATTTGAAAGTTCAGgaACTTCTCCGTGCTGCCTGTGTTTGCAGAGTATGGAACGTCGCTGCTAATCACCGTTCGCTTTGGCGTACGGTCCGTATGAAAAATTCGCAAGTAAATAACTGGACAGGACTGACAGCAGCGCTTAAGCGTAATGGAACACGCCATTTGGACCTACGTAAAATGATATCGAGTACGAATAGTGAGGAGATGTGGCAAAGCTTTTCAAACAATATCAAAGAAGTTGAATCGcttgaaattattgatttatgtCGTTGTTCATCTCAAATAGTCGAAGGATTATTCGTTTCGAATCCGAAGCTGAAAGTAATTAATGCGGTCGCGATTAAAGACGATACTATTAGTTTGGAAAATGTGGATCGATTAGAAAGTTTGGAAGAGCTCCGACTAAAATCGATCGAAGGCTTTTCGCTAGAAAGTGATTTGTTCGGTTTGAAGAACTTGAAAAATCTTAGACATTTGTCGTTAACATCAGTCCGCGGATTAGGGACTAAGGAAATTACAGTTTTGGGCGAGCTGACTAAGTTAGAATCACTCGATTTGGGTGAGTGCAGTGACTTAGGATCGGCATTTGCAACTGAAGTGCTCGGCAATCTGATGAACTTGACAAGACTAAGACTGGAAAAGGGTCAGGAGAATTGTTGTACTCTGGAAATCTTAGAGGCTGTGTCACAACTCGAACATTTGCAACAATTAGAGCTCGTGAACTTCGATATCAAAACAGGTTTCGATGAGCAACTCTCCAAGTGCAAATATTTGAAACGACTTCTGCTTATTCCAACCTACATATCGCAATCGGCGACGACAAACAACATAGTCCTTAGTGCAGTGCTTAACTTATCTGAGACGCTGCAATTGCTAACATGGGTGGTCACGTTAGAACTTTTGCGTGTTACCGCTCTGTACGTGGATCAATGCGATAacaagaaaaaagacaaaaaatttttcgacGAAAGCATCCCTGTACTGAAACCAGTACCAGGCATTATCGATGATATGGATAAAGCACAGAAAACTGCCTCGGACGTGCCCCAAGTAGAAATCTTACCACTGGTACGAGTGGAAGAAATTCTGATTGCTGGCATGCCTGAAACtaagtttaaaatattgaagGTCCCCTACCACGCTACGTGGCGGCAAAATCTAGTTGACATTTGA
Protein Sequence: MEAESFDGGYEIESTTSESLSLLPATKLAQADEQTEPMRLAVTSDEDTRESAKTSDKLNQPLEVAGIEEKTADRRTVPSDGAAMTDGGSPANAAVKRKRVDLDWSSDEEDFAGFEDCNGDTSENSHKRIKEEIQSENELENEVVKPDNMRIEQAVKSEMEEQGDENKPPDTISTDICEKIGLDEKSAGSISSHTKQRSIKDSVYKKPFALGWKRELVYRAIPGVSKDKGEVYYITPLGKKIRTKTDLQMHLSGELQLENFTFAREPIGMSSEEEMIRVAKPTARTTPAETPLGKRIPKPKAPKGASPPPQGWTPARAVKSSAASSPRPIHSTRVSDEIEAKPQTNPKSSKMSKPQKKGEPCSIECVLAMGTIPQLQCTKCLCLYHHECIAADANGGSAENRGSSKAGSARSEGGYICEPKPSQHSPPKGNQHNIGSLLRRESDNAKDANKTQISSSLVGNKSTNNGMKTSDNHTIVDTNTTLPQSIAVIKGRKYVVIRKPSTSHHENNTKDAANENYSVNQSSVSLTTGDDNQLRKRGTSARSSKSSADNIQVMDSSHQTMDRRQPPALSVHSDHFAMHFFNNVSIGYQILLQTFQYLKVQELLRAACVCRVWNVAANHRSLWRTVRMKNSQVNNWTGLTAALKRNGTRHLDLRKMISSTNSEEMWQSFSNNIKEVESLEIIDLCRCSSQIVEGLFVSNPKLKVINAVAIKDDTISLENVDRLESLEELRLKSIEGFSLESDLFGLKNLKNLRHLSLTSVRGLGTKEITVLGELTKLESLDLGECSDLGSAFATEVLGNLMNLTRLRLEKGQENCCTLEILEAVSQLEHLQQLELVNFDIKTGFDEQLSKCKYLKRLLLIPTYISQSATTNNIVLSAVLNLSETLQLLTWVVTLELLRVTALYVDQCDNKKKDKKFFDESIPVLKPVPGIIDDMDKAQKTASDVPQVEILPLVRVEEILIAGMPETKFKILKVPYHATWRQNLVDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01088359;
90% Identity: -
80% Identity: -