Ssin026446.1
Basic Information
- Insect
- Stratiomys singularior
- Gene Symbol
- ttk
- Assembly
- GCA_954870665.1
- Location
- OX940880.1:2628189-2636818[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-17 6.1e-15 55.8 0.0 2 45 479 523 478 523 0.96
Sequence Information
- Coding Sequence
- ATGTCTGTGCAACAGTTCTGTTTACGTTGGAACAACCATCAGCCCAACTTCATCTCGGTGTGCTCGTCACTGCTTCACAATGGAACGCTGGTGGACGTCACTCTGGCGGCGGAGGGAAGACAGCTGCAGGCGCACAAAATCGTCTTATCGGCATGCAGTTCTTACTTTCAGACATTGTTTACATCGAATCCATGTCAACATCCTATCGTTATTCTCAAGGATGTGCAATATAACGATTTGAAAACGATGGTGGACTTTATGTATTACGGAGAAGTGAATGTATCGCAGGAGCAACTGCCGCATATTTTGAAAACGGCAGAAATGCTTAAAATCAAAGGTTTGGCAGAAATGCCTGACGCTGCCGCATCACTGACAAAGTCCGAAAGTAAATCGTCGTCAGAACAAACTGATCAGTTGCAAGCTGGCAGCGGTGAATCATTGTGGGGAAGTACAGACTCGCAGTTCcaacatcatcaccatcaacTCCATCCTCACATGCAAGCACATCACCAGCAAAGGAGATCACCATCCCCGACTTCTTCTGGCGCTTCGCCTGCTACAAGACGAAAACGACTGAGGAAATCATCAAATAGTGGCTCAGCTGAGAGAACTTCAGAGGAGCAAAATAGTATTGAAGGCGCAGCAAACATAAACTTATCACAAATGGCTCAAATGTCATTTGGCGGTACCGGTACAAATTTGGCGCAAGCTGTTCATACGAAAATCATTAAAGAGAGCTCAAGCACCGACACTGACACCCATCCGCAGGACTCGTCACAAGAAAGCATCGATGATACCGGCAGTCACCAACACCATCACGTCCAGCAAATAAAACCCGAAACCGACTTAGGCAACGTTCAGCAGTCTATGCCACTGGATATATCCGGGCCAACAACACCCTCAGAACAAGAACCCCCCAATGTTACTTGTTCGCAGTCGCAATCGTCGCATTCGGGTGTGCAATGGACGGTTGTGGACTCGAACTATCCACGCTTTTCGCTATCATCATGTCAAGCAAGTATCTCGATTGGCGGCGAACAGCCTTCTGAGAACGGAACAAACGCCCCAAGCGGGCAGCACCatcagcagcaacaacagcagcaaggcaTTAACTCTTCATCCGGTAACAATGTGGTTACAACGAATCAACAGGGTCACATTCAAATGCACTACCAGGGGTCGGCCTATAACACACAAATGATATCTGTAAATAACCTGGTTAGTAATTATTCGCAGAACCTGTCGACGCCTACTTCGCCGACAGAGTCGACAATGGTGCAGTCGGTATATAGCCAAGGACCCACACCCACGCAATCGCCAGTGCATCAAATGGCAACCGGAAATAGTACAAGCAACGCCACTTCGCAAAATCAACCGAGTCAGTCGTCTCAGCAAATTCCGCAGAAACGGAAACGTTCTGTGAATCCTCAAGGCGACGAGAACTTTATACGAGCGCTAGAAGCCGTACGAACGGGGGGCATTGGATTTTGTAAAGCAGCCCGATTGTACGGCGTGAATAACCGAACTCTGTGGCTTGAATATAAGAAACGAGGGTATCCGATTAGCCGACCCAGCATTAAGAATCGGATCAAGTTGGAGCCTAATATCTCGCCGCCTCCGTCCTCAACCCCGACCAACGAAGAGACGAATATAGAGAATTTCGAACACATAAACCAGCCGGCGATAAATATGCAAGTTCCTCCGACCTCAGAAACACCGACGCCCATCATGTGCCCGCCTCATGCACATCCCATGGGAGTTATGAGCTTCCTCGACACGCGGCACATGGAGTTCCCAGCTAATATTCACACAATGTCCCGACAGCGATATACAGACAGTGCCGTTAACGTGAATACAGCTGCAATGAATTTGCAGGGTCTTAACTTTAACTCTATGTAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTSNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDAAASLTKSESKSSSEQTDQLQAGSGESLWGSTDSQFQHHHHQLHPHMQAHHQQRRSPSPTSSGASPATRRKRLRKSSNSGSAERTSEEQNSIEGAANINLSQMAQMSFGGTGTNLAQAVHTKIIKESSSTDTDTHPQDSSQESIDDTGSHQHHHVQQIKPETDLGNVQQSMPLDISGPTTPSEQEPPNVTCSQSQSSHSGVQWTVVDSNYPRFSLSSCQASISIGGEQPSENGTNAPSGQHHQQQQQQQGINSSSGNNVVTTNQQGHIQMHYQGSAYNTQMISVNNLVSNYSQNLSTPTSPTESTMVQSVYSQGPTPTQSPVHQMATGNSTSNATSQNQPSQSSQQIPQKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNISPPPSSTPTNEETNIENFEHINQPAINMQVPPTSETPTPIMCPPHAHPMGVMSFLDTRHMEFPANIHTMSRQRYTDSAVNVNTAAMNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01375938; iTF_00203662; iTF_00203429; iTF_01127577; iTF_01127239; iTF_01043548; iTF_01044006; iTF_01087933; iTF_01088659; iTF_00202719; iTF_00202462;
- 90% Identity
- iTF_01375938; iTF_01127577; iTF_01127239;
- 80% Identity
- iTF_01375938;