Bmor001921.1
Basic Information
- Insect
- Beris morrisii
- Gene Symbol
- ttk
- Assembly
- GCA_951812415.1
- Location
- OX638310.1:45993709-46010627[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-18 4.2e-15 56.1 0.0 2 45 506 550 505 550 0.95
Sequence Information
- Coding Sequence
- ATGTCGGTGCAACAATTTTGTTTGCGCTGGAACAATCATCAGCCGAATTTCATTTCGGTATGCTCGTCGCTTCTACACAATGGCACGCTCGTTGACGTCACGCTGGCCGCCGAGGGACGACAGCTCCAGGCGCATAAAATCGTCTTGTCGGCATGCAGCTCGTATTTTCAGACGTTATTCACCTCTAATCCATGTCAGCATCCAATAGTTATCCTAAAAGATGTACAGTACAACGATCTGAAAACTATGGTGGATTTTATGTACTACGGTGAAGTAAATGTTTCGCAAGAGCAACTGCCGCACATCCTTAAAACAGCGGAAATGTTAAAAATCAAAGGTTTAGCCGAAATGCCCGATGCAGCTGGTTCCCTAACAAAGTCGGAAAGTAAATCGTCATCCGATCAAACGGAACAGTTACAAGCCGGCAGCGGTGAATCGTTGTGGGGTAGCACAGATTCACACTTccaacatcatcatcatcatcacctcCATCAGCAACATCAATTACAAACACATCATCAACAGCGAAGAACACCGTCGCCCACGGCATCGGGAGCATCGCCTGCAACACGAAGAAAACGTTTAAGAAAATCATCGAACAGTGGTTCCACAGAGCGAACATCCGAAGAGCAGAGCAGCGTCGAGGGTCCAACTAATATTAATCTATCACAAATGGGCCAAATGTCGTTCGGTGGTGCTGGCTCGAACTTAACACAGACCTTACATAcgaaaataattaaagaaagtTCCAGTACGGACACGGACACCCATCCGCAGGACTCTTCGCAAGAAAGTATCGACGATGCAACCAGTCATCAACATCATGTGCAACAAATTaaacctGAAGCTGATTTGAGCAATGTACAGCAGTCTATACCTTTAGATATATCGGGACCTACAACGCCGTCCGAGCAAGACGGACCTAATGTAAGCTGCTCGCAGTCGCAGTCTTCTCATTCGGGTGTGCAATGGACGGTTGTCGACTCAAATTATCCACGATTTTCGCTGTCATCATGTCAGGCTAGTATTTCTCTTGGCGGCGAACAGAGTAGCGAAAACGGAACTAATACTTCGAACGGTCAACACCAccaacagcaacagcaacaacaccagcaacaacaacaacagcagcaacaacaacaacagcaacaacaaaataTCAGTACATCATCGGGCGGCGGTAATAGCGGCGTAGTCACGTCGAATCAACAGCAAGGTCATATTCAAATGCACTACCAAGGATCGCCATATACCCAGCAATTGATATCAGTGAATAATTTGGTTAGTAGTTACTCGCAAAACCTCTCAACGCCAACATCGCCGTCTGATTCGACAATGGTACAATCCGTTTATAGTCAAGGACCGACACCGACACAATCGCCCGTACATCAAATGACAACGGGCGGCGGCGGCGGTGGTGGTAATACGACAACGTCGAATTCAACGGCACAAAATCAACCGACACAATCGACACCGACACCGCAAAAACGAAAACGTTCGGTTAATCCGCAAAGCGATGAGAACTTTATACGAGCATTAGAAGCGGTACGAACTGGCGGTATTGGTTTTTGTAAAGCAGCTCGACTATACGGCGTTAATAATCGTACGCTTTGGTTAGAATATAAGAAGCGTGGCTATCCGATAAGCCGACCTAGCATTAAAAATCGTATCAAATTAGAACCAAATATTTCGCCACCGCCATCATCGACGCCAACCAACGACGAGACCACAATAGCAAATTACGACCATATTGATCAGCCCGCAATAAATATGCAAGTTCCTCCCACATCGGATACACCGACACCAATAATGTGTCCACCGCATGGGCATCCGATGagtgttttgaattttctcGATACACGACATATGGACTTTCCGACCAGCATTCATACAATGTCGCGACAGCGATACGCTGATAATGCCGTTAACGTAAATACAGCTGCCATGAATTTGCAGGGTCTTAATTTTAATTCCATGTAg
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTSNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDAAGSLTKSESKSSSDQTEQLQAGSGESLWGSTDSHFQHHHHHHLHQQHQLQTHHQQRRTPSPTASGASPATRRKRLRKSSNSGSTERTSEEQSSVEGPTNINLSQMGQMSFGGAGSNLTQTLHTKIIKESSSTDTDTHPQDSSQESIDDATSHQHHVQQIKPEADLSNVQQSIPLDISGPTTPSEQDGPNVSCSQSQSSHSGVQWTVVDSNYPRFSLSSCQASISLGGEQSSENGTNTSNGQHHQQQQQQHQQQQQQQQQQQQQQQNISTSSGGGNSGVVTSNQQQGHIQMHYQGSPYTQQLISVNNLVSSYSQNLSTPTSPSDSTMVQSVYSQGPTPTQSPVHQMTTGGGGGGGNTTTSNSTAQNQPTQSTPTPQKRKRSVNPQSDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNISPPPSSTPTNDETTIANYDHIDQPAINMQVPPTSDTPTPIMCPPHGHPMSVLNFLDTRHMDFPTSIHTMSRQRYADNAVNVNTAAMNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01375648;
- 90% Identity
- iTF_00203662;
- 80% Identity
- iTF_00203662;