Basic Information

Insect: Stomoxys calcitrans
Gene Symbol: L
Assembly: GCA_001015335.1
Location: NW:259638-416202[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 7.1e-06 0.00033 20.6 1.7 1 23 319 341 319 341 0.98

2 19 0.59 27 5.1 5.8 1 23 347 369 347 369 0.98

3 19 3.1e-07 1.4e-05 24.9 3.1 1 23 375 397 375 397 0.99

4 19 1.4e-05 0.00065 19.6 0.3 1 23 403 425 403 425 0.98

5 19 1.6 75 3.7 0.8 2 23 490 513 489 513 0.88

6 19 0.0021 0.099 12.8 0.2 2 23 540 562 539 562 0.97

7 19 0.14 6.7 7.0 0.4 1 23 662 684 662 684 0.95

8 19 0.00093 0.043 13.9 1.4 2 23 692 713 691 713 0.97

9 19 0.0013 0.062 13.4 0.6 1 23 721 745 721 745 0.94

10 19 0.15 7.1 7.0 0.0 1 19 750 768 750 770 0.94

11 19 4.4 2e+02 2.4 0.4 1 23 780 803 780 803 0.90

12 19 0.0018 0.085 13.0 2.9 1 23 842 864 842 865 0.96

13 19 4 1.8e+02 2.5 0.9 1 23 1031 1055 1031 1055 0.89

14 19 0.0011 0.049 13.7 4.8 2 23 1064 1086 1063 1086 0.97

15 19 0.16 7.2 6.9 0.1 1 23 1092 1114 1092 1114 0.92

16 19 0.05 2.3 8.5 1.0 2 23 1122 1143 1122 1143 0.96

17 19 0.21 9.8 6.5 0.5 2 23 1235 1256 1235 1256 0.94

18 19 0.021 0.95 9.7 0.0 1 23 1266 1288 1266 1288 0.96

19 19 0.013 0.61 10.3 0.7 1 23 1295 1317 1295 1317 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	7.1e-06	0.00033	20.6	1.7	1	23	319	341	319	341	0.98
2	19	0.59	27	5.1	5.8	1	23	347	369	347	369	0.98
3	19	3.1e-07	1.4e-05	24.9	3.1	1	23	375	397	375	397	0.99
4	19	1.4e-05	0.00065	19.6	0.3	1	23	403	425	403	425	0.98
5	19	1.6	75	3.7	0.8	2	23	490	513	489	513	0.88
6	19	0.0021	0.099	12.8	0.2	2	23	540	562	539	562	0.97
7	19	0.14	6.7	7.0	0.4	1	23	662	684	662	684	0.95
8	19	0.00093	0.043	13.9	1.4	2	23	692	713	691	713	0.97
9	19	0.0013	0.062	13.4	0.6	1	23	721	745	721	745	0.94
10	19	0.15	7.1	7.0	0.0	1	19	750	768	750	770	0.94
11	19	4.4	2e+02	2.4	0.4	1	23	780	803	780	803	0.90
12	19	0.0018	0.085	13.0	2.9	1	23	842	864	842	865	0.96
13	19	4	1.8e+02	2.5	0.9	1	23	1031	1055	1031	1055	0.89
14	19	0.0011	0.049	13.7	4.8	2	23	1064	1086	1063	1086	0.97
15	19	0.16	7.2	6.9	0.1	1	23	1092	1114	1092	1114	0.92
16	19	0.05	2.3	8.5	1.0	2	23	1122	1143	1122	1143	0.96
17	19	0.21	9.8	6.5	0.5	2	23	1235	1256	1235	1256	0.94
18	19	0.021	0.95	9.7	0.0	1	23	1266	1288	1266	1288	0.96
19	19	0.013	0.61	10.3	0.7	1	23	1295	1317	1295	1317	0.95

Sequence Information

Coding Sequence: ATGGATTCTGCATCtccaatagcaacaacaacaataccactATCAGCAGTTGCACAGTCAACTGAAGCAGAATCTGGAAGCGCGACTACCGCAGAAGAAACTATGGCAGTAGTTACACACAATAACAATGgTCACATTGTGGAGAATCAAACTTCGAACACAATATTGAAGAATGGTAGCGGAGACAAGGAAGAATATTTGCAAAATCCAAACTCTCCCAAAAACAGTCTCCTAAAGGAGGAATCTAAACAAAGCTGTAAAGATGGCGAAAGGGTGGTGGATGATGACGATACCAATGAACTAGATGATCTGGACGATGATGAGATAGATGAAGATTTGCTTAGCTTGGACAGCTACTATTCAGACATGTACTCCACGCACACTTCATCTAGCTATTCACCTTCCATCTCAGATGGTACTCTAACACCGAATTCACTGCATCATCACCAACATTTGACTTTACCATCGCATTTGGCCTTTGGCTCCTCCGGCTACGACGACGAGACATTGTTGCAGACGCACCAGCATCTGCATAGACTAAAAGCTAATGGTGCCGTAGATGGCACTGAATATGATGACGAGGATGAAAACAACGAAAGGACTGCAAAGAATGACACAAATCCTGACGCCGGAGAGAACACTGAAAACAATGATTGCACAGCCACAGCGACCAATGTAGCGGAAGGTGAAGgtggacaacaacaacaacagcagcaacatcacCAACGTcaacaccaccatcaccatcatcatccagGGCAGCATCTTAAGCGTAATGGCCGTCACCATCGCTATGCAGAACATGCCCTGAGAATTCCTTCAAAATTACGCAAAGTCGAAAGGGATTCGGCTATGGGCACCGGCAGTGCCACAAATGCACTCAAGTTTAATAAGCTGACAGGAGATGGCGTTAAGAGCGCAAACAATATCGCAAGTGCTGGTGCCGACGGATCCTATCAATGTCAGTTCTGTGATAAATCATTTCCGCGTCTTGGTTATCTAAAAAAGCATGAGCAGAGCCATGCCGAACACTTGCCATTTAAATGCGACTACTGTGCCCGTCTCTTCAAGCACAAAAGGTCGCGAGATCGTCACACCAAATTGCATACCGGAGATCGACGGTATCGATGCCCCCATTGCGAGGCGGCTTTCTCCAGAAGTGACCATCTGAAGATTCACATGAAGACCCACGATAACCAAAAACCATTCCAGTGTACAATATGTAATCGAGGTTATAACACGGCGGCGGCCTTGACGTCGCACATGCAAAACCATAAAAAGCAAGCGGCACTCCTAGCGGCAGGTGGAAATCCCCAGGCTCTTAACTACAGTCCTCGATCGACGGGATCGGCTTCCAGTAATAGCAGCTTGCAAAAGCGGCGTTATGCCCTGTCGTTGGGAAGCGAGCACAGCCCTAGTCGCCTGGAATTCAACAAGCGCGGAAGATCATCATCATCGAATCTGTTAAAATGTAcattttgctcaaaatcggattTCACCACAGTGGAACAGTTGAATAGTCATCTGCAGGCGCAACATGAAAAAGAATTGGCCCATTCCATGACACCGCCAACTCCGACCAATGTGCCATCCACGGACGCACCAAACTTTCAGATGACATGTGAATACTGTACCATGAAATTTGCCAATATTGCCGCCATGTTCCAACACATGCGATCGGCGCATGTTGACCGTCTTACAAGTCCCAATTCGTATTTCGAACATTTCAATCGGCTGGCGGCTTGTGGAACTTTTAGTCCGCGCCTATTAACTGGACAGCCTTTGCGTAGCACCGCCAGCGCTGATGAGAATAGCATTAAGGAAGAGTCAACTCTGGCAAGTCCAAAGTCGTTGGATGCCAGCGTTCGACAAAGTGAAGACGAACCCACAGACCTTAGCCAAAACAATCGCAGGTCGATAACGCCGTCCAGAACACCACAGAAATCACCACAAGATACAGCGATGGCTGACAAACCAGGGGTATTCCTTTGCAATCAGTGCAATGCCGGATTGCCCGACTTTGAATCCTTCCGCAATCATTTGAAATCTCACATAGCACAGGGCTTGAATATGGTCTGCCACCACTGCGGCCTCATGCTTAGAGAGCAATCGGAGTACGAGAGACACATCATCTCCCATTTTCTAATTACGAATTCCGAATACAATTGCTCGACAAGCTGTCAGAAGTCATTTGGGAAGCCCGAAGAGCTTCAGAAACATCTTATGGAGCAGCATGCCACAACAATGTATAAATGTGGCCTCTGTAGTGAAATGTTTGAAACGAAAGTGGCTATTCAGGTTCATTTTGCCTGTACTCATTCGGCGGAGACCAAACTATTTCGTTGTTCCGCTTGTATGGATGTTTTTCGCGCAGAAAGTGACTTTAATGTTCATGTTAAAACCCGACATCAGACCGTGAACAACAATACCTCACCGGTGAATTCCTTGCAATGCATGTTCTGCAGAACTGtgtgttcctccgatttggaaATGCAGTTCCACTTGGCCGCCCACGCTCGGCAGTTCCGGTGCCCTTCATGCCCAGAAACTTTCCATGTGGAGTTTCTACTTGATCGCCATATGCAAACTCATCACGCCGGCATCGAGCGCCCTGCCCCAGTGCAAAAAGAGGCCTTTAACGAACATTCGCCGCCTATGAGTAATAACGCCATTGGTCCCATGAACTCGTTGTATGTGAACGCTCTCTTCGGAAAGGGGCCCCTTATGCCGCTGAATGCTCAGAATAATAACAACAGTATACTAGATTACAACATGGCGTTTGCGTCACACTTAAATAAGGGACTTTTTCCCAATGCGGCTGCCAATAAGTTTTACAATCCGCTACAAATCGATACAAATGCTATGAAGCATTCCGCATTAATGTATGGACTATCGCAGCGATATTTTGACACAAATCGCACAGTCATGGAAATgtaccagcaacaacaacagcagcaacaacatcaccATCAGGATAATACCAAATCTAGCAACAATTACTTCATCAGCCCAAAGCAACCAACAGCCACGCCCCACTTGCCGCAGGAAAGTCACGTTCGTAGTGAAGTAACAACTTCACCCTCCACCGGATTCAGTTGCGGCATATGTGAGCGCAATGATTTCCGCACAGAGTCTGAAGTCCATTCTCATcgcaaaattgtgcacaacctCAAGACCGGAGTAAGTCTTAAATGTGCTTACTGTTCGGGAAATTTCAAGTCGCGAAGCGAACTGGAGCACCACATGAAGACTTGCCATAATTCTACTGGAAAACACAAATGTTTGATATGCGACGAAATATTCCCTTCGCCCGCTATATTGGCGGAGCACAAATTGCAACATTCAAAGGTTGGCCAATCGGGTCGGTGTTCTCATTGCTCCAAGCCACTAGCCGATGTGAGTGCATTCAAAACTCATCTCTCTGAACACAACACCGAGGGACAAATGCCCGTCCAGTGCATATGTTGCCGCCAATCTTTGCATTCCGAATTCGAGATAAGTCTCCATGCCAAGTTCCATGTGAAGACCTCCTCTGTGACCGAAAATGTTTGCGCCCTTTGTCTGGAACCAATCTCCAGTTCACCTTCGGAAGCCAAAGTATGCGAAAAATGTTGTCGAAAACACAATCTTAACAATAAATTCAAACAGCAGCGAGAACACTATGATAGACCAAATGCCGATCAAAGACAGTACATAGCCAATCGTTGTAATCTCTGCAAAATGGTTCTGCCGCATCCGCAAAAGTTACAGGAACACTTAGTAGAACACACCTTTGTTGGCTGCGAAGATCGCGGCTTCAACTGTTACATCTGCTCGTCCGTCTTCACGGCTCCTGGTGGTCTTCTAAATCACATGCTGGAACATGGCATCAACTCCAAGCCCTATGACTGTAACCTTTGTCCCGAGAAGTTCTATTTCCGCGCAGAGTTAGACCATCATCTTATCGACCACGATCTGCGAGAATCCTCCTCTCTGAAAAATGAAAGCGATCCCCATACTCCAAAAGCAGAGCACCAGGTCACTGTGGACGAGACCAACAGTGCCGATGGCATGAGGCTGTCAGAACAGCCCCATCTCTTGAACGAAGTCAAACAGGAAATTGTGGAAGGCGATAATCACAATCATCCGGAGGACGATGAGTATATCGAAGTGGAAAAGTTGcatgacaacaacaaccaggtgTCATCCAATGCCGAAGTAAAGGACAAGGCCAAGGAAAGCACCGAAACAACCCGGACGGAAAAGGGCATCTGA
Protein Sequence: MDSASPIATTTIPLSAVAQSTEAESGSATTAEETMAVVTHNNNGHIVENQTSNTILKNGSGDKEEYLQNPNSPKNSLLKEESKQSCKDGERVVDDDDTNELDDLDDDEIDEDLLSLDSYYSDMYSTHTSSSYSPSISDGTLTPNSLHHHQHLTLPSHLAFGSSGYDDETLLQTHQHLHRLKANGAVDGTEYDDEDENNERTAKNDTNPDAGENTENNDCTATATNVAEGEGGQQQQQQQHHQRQHHHHHHHPGQHLKRNGRHHRYAEHALRIPSKLRKVERDSAMGTGSATNALKFNKLTGDGVKSANNIASAGADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQALNYSPRSTGSASSNSSLQKRRYALSLGSEHSPSRLEFNKRGRSSSSNLLKCTFCSKSDFTTVEQLNSHLQAQHEKELAHSMTPPTPTNVPSTDAPNFQMTCEYCTMKFANIAAMFQHMRSAHVDRLTSPNSYFEHFNRLAACGTFSPRLLTGQPLRSTASADENSIKEESTLASPKSLDASVRQSEDEPTDLSQNNRRSITPSRTPQKSPQDTAMADKPGVFLCNQCNAGLPDFESFRNHLKSHIAQGLNMVCHHCGLMLREQSEYERHIISHFLITNSEYNCSTSCQKSFGKPEELQKHLMEQHATTMYKCGLCSEMFETKVAIQVHFACTHSAETKLFRCSACMDVFRAESDFNVHVKTRHQTVNNNTSPVNSLQCMFCRTVCSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHAGIERPAPVQKEAFNEHSPPMSNNAIGPMNSLYVNALFGKGPLMPLNAQNNNNSILDYNMAFASHLNKGLFPNAAANKFYNPLQIDTNAMKHSALMYGLSQRYFDTNRTVMEMYQQQQQQQQHHHQDNTKSSNNYFISPKQPTATPHLPQESHVRSEVTTSPSTGFSCGICERNDFRTESEVHSHRKIVHNLKTGVSLKCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGRCSHCSKPLADVSAFKTHLSEHNTEGQMPVQCICCRQSLHSEFEISLHAKFHVKTSSVTENVCALCLEPISSSPSEAKVCEKCCRKHNLNNKFKQQREHYDRPNADQRQYIANRCNLCKMVLPHPQKLQEHLVEHTFVGCEDRGFNCYICSSVFTAPGGLLNHMLEHGINSKPYDCNLCPEKFYFRAELDHHLIDHDLRESSSLKNESDPHTPKAEHQVTVDETNSADGMRLSEQPHLLNEVKQEIVEGDNHNHPEDDEYIEVEKLHDNNNQVSSNAEVKDKAKESTETTRTEKGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01175574;
90% Identity: -
80% Identity: -