Basic Information

Insect: Stomoxys calcitrans
Gene Symbol: -
Assembly: GCA_001015335.1
Location: NW:78899-82793[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.7 6.5e+03 -3.1 0.2 14 23 9 18 4 22 0.72

2 12 0.93 1.3e+03 -0.9 0.0 18 26 72 80 67 82 0.87

3 12 4 5.4e+03 -2.9 0.1 4 14 259 269 259 270 0.82

4 12 2.1 2.9e+03 -2.0 0.6 17 43 394 417 391 418 0.69

5 12 0.0046 6.4 6.5 1.1 14 43 421 447 411 448 0.76

6 12 0.71 9.7e+02 -0.5 0.7 14 43 451 479 447 480 0.69

7 12 4.1e-08 5.6e-05 22.7 0.8 3 44 477 512 475 512 0.91

8 12 0.074 1e+02 2.7 1.3 14 29 524 539 518 550 0.76

9 12 0.008 11 5.8 1.2 8 26 547 565 541 571 0.80

10 12 0.0034 4.7 6.9 0.5 6 29 574 595 571 607 0.80

11 12 0.096 1.3e+02 2.3 2.6 6 39 601 631 596 634 0.82

12 12 0.047 65 3.3 2.0 6 38 630 658 627 663 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.7	6.5e+03	-3.1	0.2	14	23	9	18	4	22	0.72
2	12	0.93	1.3e+03	-0.9	0.0	18	26	72	80	67	82	0.87
3	12	4	5.4e+03	-2.9	0.1	4	14	259	269	259	270	0.82
4	12	2.1	2.9e+03	-2.0	0.6	17	43	394	417	391	418	0.69
5	12	0.0046	6.4	6.5	1.1	14	43	421	447	411	448	0.76
6	12	0.71	9.7e+02	-0.5	0.7	14	43	451	479	447	480	0.69
7	12	4.1e-08	5.6e-05	22.7	0.8	3	44	477	512	475	512	0.91
8	12	0.074	1e+02	2.7	1.3	14	29	524	539	518	550	0.76
9	12	0.008	11	5.8	1.2	8	26	547	565	541	571	0.80
10	12	0.0034	4.7	6.9	0.5	6	29	574	595	571	607	0.80
11	12	0.096	1.3e+02	2.3	2.6	6	39	601	631	596	634	0.82
12	12	0.047	65	3.3	2.0	6	38	630	658	627	663	0.85

Sequence Information

Coding Sequence: ATGTCGTCGGCTTTAACAAAGATCAATGCTAAGGAACGCTGTCGCACATGCCTAAGCAAATTAATCAAAAACGAAGTAAGTCTGGAAGATGTCGACTCGggaaaaaatttcgtttgtgTTAATTCCAATCCTGAATTGAGGGATCTTTTGGACAAATATGTGGGTATTGAAGGTGATGAGGAGACAAATCAGGATAAAGACTACCCAGCCAGTGTGTGCATCAGTTGTATGAGACAATTGCAACATTTTGAGGCATTCCGCAATAAAGCCCTAGATAGTGCTGAAAAGCTGTTCCGAGTTTTTCGTGGTACCGACGAATGTAAAATCGAATTGGATGATAATGGAGTATCCATGCCTTGTAAGGCCTTACAAGTACAATTGAAGACGGGAAAAGAAGCCGAAAATGATATATTCAATTTGCTGCTAAAAGATTCCTTAATGGAAACTGAAGCCATTTTATTGGACGGAGTCGAAAGCGACAATGTTATTAACAATATGGATCCCGATCCGTTTCAAACTGAAATTGATGGAAATAAACGTAAATGTAGGAAGACAAAACGAAAAGAGGATTCATCTTTGCcagaaaatcataacaaatctAACAGAAAAAGAAAACGCATAAAAGCAAGCGAAAAAAGTGGGCATGATAACAAAGATGATGTGGCAGACAGGGAAAAAGATCACTTTCAAGCGAATTTGTTGGAAAATTCGGATAAAGGCAATGAAATCGACTGTGAAGTTAAGGTAAAAGAACTTGATGAAGACTATGAAGACTGGCAACATATGGATTTCCATACGAACGATGACAATGATAGCTCTGACAATGAAGTATTAAGCAAGAAGATACAAAATTCCCGCAAAGTTCTAAAGAAAACTATGAAAAAAGCCCCAAAAACCGAACCTGGGGAGGAATATGAGGAGGAAAATGCTGATTCCGATTCAGACTTTGTACTAGAATCCATGAGAAAAAgtggagaaataaaaaaatctccCAATGATACAGATGATATGCACGAAAGTGAATTCAAAGATTTGGATGATTataaaactgaattggaatccGATAGTATATCATCAGAATCCGATTTTGAAGTAAAAACtgagaaaaaacaaaagtctTCCTTTTCGCCTGGCAAACGATCGGCGGCCAGTGGACGTAAAAAAGGTCTTACCAATAGCCATAAATGTGATCAATGCAACCGTAGATTCGCCCACAAAGTAACACTCGATGCCCATGTTCGAAAAATACATCAAGGAGAGAAAAGAGCTTACAAATGTGAGCTATGTGACAAGTCGTATTCGTTTATGGGAGGCTTATCGACTCACATGCGGGAAACCCATGAGCGCCAAGAAGAGGCGTATAGCTGTAAAATACCCGGTTGCGATAAGAAGTACACCAGTTACATCACATTACAGCGTCATGTTCGTGTTAAGCATCTTATGAGTGAGGTACCCACCAGATTTGTGTGTGAACAATGTGGAGCTACATTCAAACAAACGTCAAATTTGCGATATCACATGAGAACTCGTCATCCCACTGAAGATGATTTGAAGcaaaaagaaattataaagGAACGTTTAGAATGTGAAATCTGTAAAAAGTCCTTTAACTCGCAATATACACTAAAATATCATAAACTTCGCATACATGCCGACGATAAAAAGTATGAGTGCAAAATTTGTGGCAGACGCGTTGCCAAGAAGTTCATGTTGGATCAACATATGCTGGTACATTCCGAAGACAAGACCGCGTGCAAATTTTGCGGACGAGAATTTGTGCGCAAGTATCAAGTAGAGGCGCACATTAAGGCCGTCCACCAAAAGTTAAAACCATTTCAATGTTCACACTGCAGCGAAAGTTTTGCATCGAGAAAAACTTTGCGTCACCATGTTTACATACATACTGGAGAAAAGCCTTACGTATGTGATATATGCGGTCAGGCGTACCGACAACCAACTTGTCTAAAAAATCACCGTAAAATACACAATAAAGCAAATAGTAGTAATACTAGCAATAACGGCAATATAAACCAAGAACCTGATGGAGCAGCCGCGgctgctgctgcagcagcaATTGCCAATCGAAATTTTATAAACACCTTAATGCAAGGCAATGAAAATGTAATGGATGGAGATGCCTTAGGCCTTAATTAA
Protein Sequence: MSSALTKINAKERCRTCLSKLIKNEVSLEDVDSGKNFVCVNSNPELRDLLDKYVGIEGDEETNQDKDYPASVCISCMRQLQHFEAFRNKALDSAEKLFRVFRGTDECKIELDDNGVSMPCKALQVQLKTGKEAENDIFNLLLKDSLMETEAILLDGVESDNVINNMDPDPFQTEIDGNKRKCRKTKRKEDSSLPENHNKSNRKRKRIKASEKSGHDNKDDVADREKDHFQANLLENSDKGNEIDCEVKVKELDEDYEDWQHMDFHTNDDNDSSDNEVLSKKIQNSRKVLKKTMKKAPKTEPGEEYEEENADSDSDFVLESMRKSGEIKKSPNDTDDMHESEFKDLDDYKTELESDSISSESDFEVKTEKKQKSSFSPGKRSAASGRKKGLTNSHKCDQCNRRFAHKVTLDAHVRKIHQGEKRAYKCELCDKSYSFMGGLSTHMRETHERQEEAYSCKIPGCDKKYTSYITLQRHVRVKHLMSEVPTRFVCEQCGATFKQTSNLRYHMRTRHPTEDDLKQKEIIKERLECEICKKSFNSQYTLKYHKLRIHADDKKYECKICGRRVAKKFMLDQHMLVHSEDKTACKFCGREFVRKYQVEAHIKAVHQKLKPFQCSHCSESFASRKTLRHHVYIHTGEKPYVCDICGQAYRQPTCLKNHRKIHNKANSSNTSNNGNINQEPDGAAAAAAAAAIANRNFINTLMQGNENVMDGDALGLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01375112;
90% Identity: iTF_01375112;
80% Identity: iTF_01375112;