Scal003156.1
Basic Information
- Insect
- Stomoxys calcitrans
- Gene Symbol
- Rel
- Assembly
- GCA_001015335.1
- Location
- NW:1063637-1068071[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5 5.3e+03 -3.2 0.1 13 29 21 36 17 41 0.69 2 3 7.2e-51 2.5e-47 160.6 0.5 1 168 157 339 157 340 0.92 3 3 1.4 4.7e+03 -3.0 0.3 108 147 620 652 581 662 0.53
Sequence Information
- Coding Sequence
- ATGTTGCCACATTGCTTTCAATCAAATGACAAGGATATTGTCGATATGGATACTAAGGAAAGAATTCGCTATAATAGCGAATCCTCAATGTCTGGCACCAGTGGTTATTCCACAACATCTCCAGGACCAGGAAATTCTCCCAATTCTACAGGCTATTCACCAGTGCATTCGCCAGCATCGACAATACTACAATCGGAATTCTCCAATTTGACCATACCACAACAGAATTCCTATCAACAAATACATTCGTCCTCGCCGCAGTACATGCAATTACAAAATGTGCCATTAAATCAGCAGACAACAGCATACgtaaccaccaccaccagcagcaACTACAGCAATATTGCTGTAAACTACAGTTTCGGAAActtagaaacaacaacaaatacttcAACCATGCCTGTTAACTATCAAAATAATTACACGCCTTCTTCATATATGGCAGTGAAGCGTGAGTACGCCGCCACAATACGCATTTCAGAACAACCGGTCGAGAAATTCCGTTTCCGATACAAATCCGAAATGCATGGCACTCATGGTTCCCTTAACGGGGCCAATTCAGTGCGCAACACCAAAAGTTTTCCCGAAATCGAATTATGCGGTTACAAGGGTGATGCTGTAATCCGTTGTAgtttatttcaaacaaatcgcgATAGTCCACATAGCCATCAACTTGTTGTGCGCAAGGATGACCATGACATCTGTGATCCCCACGAGCTGAAGGTGTCTGAGACCACTGGTTATTATGTGGAATTCAAAAATATGGGCATCATACACACGGCCAAAAAATTCATTGTGGAGGAGTTGCTGAAGAAGAAACGAAGGCGAAAGCATTTTGAGTTGGGTCGTGATACATTGACAACAAAAGAGGAACAAGAGCTCTTTAAGGAAACTGAGAAGGAGGCGAAGGATATGAATTTAAATCAGGTTCGCTTATGTTTCGAAGCTTTTCTTGTTGATGCAAACAATCTTTATACGCCGATTGCTGCACCGGTGTACTCAAATCCCATTAATAATCGCAAATCAGCTCAAACTGGGGATTTACGCATAACACGATTAAGCATTGCAACCGGCAGTGTAATTGGCGGAGAAGATCTTATACTACTTGTCGAAAAagttagtaaaaaaaatattaaagttaGGTTTTTCGAAATGAAGGATGATGAAATGTTATGGGAAGCCTATGCCAGTTTCCGAGAATCTGATGTTCATCATCAATATGCCATTGTTTGTCGAACACCGCCATACGTGAATAAAGAAATTGACAAACCTGTTGAAGTTTTTATAGAACTAGAAAGGCCTTCGGACGATGAGCGTAGCTATCCTCCAGTGTCTTTTAGATATAAGCCCAGAGATGCGGTTATATCACGCAAAAGACGGCGCACCTGTTCCACCATGTCTGGCAGCAGTGGCAGTAATTCAGGCTCTTTGAGCTCTGGCGATATACCGAAAACCATAGAAGAGCAGCAGCTAAATCAGCAACAAATGCAGCAACTACCATCTGGCGATCTTTTTCCCCTTAAGAACATATCGGAGGAAATTGATAAGCTTATAAATAGTCCAGATTTTaaacgaaaattcaaaaatttttccgaGGAAAATACATACTTTCAAGATATATTAAAAGCGGTTGATGGagatattttttccaattttaccgATGGCCTAATTGGTGGTTTTAATGAGAAGGATGGAGCTGCCAGCAATTCATCCGAGAGTAGCAAATCGTTGTTACATTACAAAAAGTTAATGATAAGTAAAAAGTTAATGGATACTGCCCGACAAAACGATGCGACATCGGTAAGGTGTCTACAGAAAATCACCGATATATATATGAAGGCCAAATCCAATGTATCTCAGCATAAAAAAGCCGCAGAGGAAATTGCAAAACATTTACAGGAACATGCAGAACAATCAGAACTAAATGGCGACTCGCTGATGCACGAAATGGTTGTGAACAACAACGGCACAAGCGCCATGCGTCTATTccatattttaaagtttttcgaATTGGGACAACTGTTCAATACcataataaacaacaaaaatcagaCGGCATTACATGCTGCCTGTTTATATGACCGTTCCCAATTTATAAGGCCGCTCTTAAGTTTGGGCTGCAATCCCAGCGCGCAGGATATAAAAGGCAACACAGCGTTACACATAGCAGTACGCGAAGGACATATGCAATGTCTGGAGTGTTTCCTGAAGTCTGAAAAAAGCGTTGATTTGAATATAAGAAACGACGATGGATTTACCCCTTTACATTTAGCTATAAGGGCAAACAACGATGAAATGGCTTCAAAGCTAATACTGGATAAGGACAAAACAGTGGCGGCAGTCTCAAATCGAAAAGACGGCAATAATGCCTTGCACACTGTAATAGAGCAACAGAATTTGCATTTGGTCAAACTTATACTTCAAAATCAAACATTAGCACCTATACTACATTCTACAAACACAGCAGGACATACACCTTTGGATTTGGCAAAACAGTTGGCCACCTCCAGTAAACAAGCTGGTGAAATATGGAGCTTAATTCGAACCTGTAGCGGTGCCAACACATCATCGAAAGACGTCAATGCTGTACCATTTAGCGATGTAGAAGACAGTAGTTCAGCGAtacttgttataaaagaggaagAACAAACATCCTCATCAACCGATGATGAGGACGAAGATAGCCTAGAGCCAATGGTTACTATACCTGTTTCCAAAGATGGCAATGTGGAAGTTGAAACACATGACATGGACATTGAAATAAAAACCGAATTCGAAAATGGAACTCCAGCTGAAATAACAGCAATTGAATTGGGCAGAGCCTTAGATGACACGCAGATATTCTCCAAATTATGTCAGGCTTTAAAATCCAATAATAACTGGAAACAAGTGGTGGTTGTACCAAGCTTTTACCTTAAGGACCCGGAAACAATGTTAAACTATATCAAGCGCAACGTAAAGAGTATCGACTGTCATTCATTTGCTATGACGCTGCAAAAGatcgataaaaatttactaagtttaataaaaaactaG
- Protein Sequence
- MLPHCFQSNDKDIVDMDTKERIRYNSESSMSGTSGYSTTSPGPGNSPNSTGYSPVHSPASTILQSEFSNLTIPQQNSYQQIHSSSPQYMQLQNVPLNQQTTAYVTTTTSSNYSNIAVNYSFGNLETTTNTSTMPVNYQNNYTPSSYMAVKREYAATIRISEQPVEKFRFRYKSEMHGTHGSLNGANSVRNTKSFPEIELCGYKGDAVIRCSLFQTNRDSPHSHQLVVRKDDHDICDPHELKVSETTGYYVEFKNMGIIHTAKKFIVEELLKKKRRRKHFELGRDTLTTKEEQELFKETEKEAKDMNLNQVRLCFEAFLVDANNLYTPIAAPVYSNPINNRKSAQTGDLRITRLSIATGSVIGGEDLILLVEKVSKKNIKVRFFEMKDDEMLWEAYASFRESDVHHQYAIVCRTPPYVNKEIDKPVEVFIELERPSDDERSYPPVSFRYKPRDAVISRKRRRTCSTMSGSSGSNSGSLSSGDIPKTIEEQQLNQQQMQQLPSGDLFPLKNISEEIDKLINSPDFKRKFKNFSEENTYFQDILKAVDGDIFSNFTDGLIGGFNEKDGAASNSSESSKSLLHYKKLMISKKLMDTARQNDATSVRCLQKITDIYMKAKSNVSQHKKAAEEIAKHLQEHAEQSELNGDSLMHEMVVNNNGTSAMRLFHILKFFELGQLFNTIINNKNQTALHAACLYDRSQFIRPLLSLGCNPSAQDIKGNTALHIAVREGHMQCLECFLKSEKSVDLNIRNDDGFTPLHLAIRANNDEMASKLILDKDKTVAAVSNRKDGNNALHTVIEQQNLHLVKLILQNQTLAPILHSTNTAGHTPLDLAKQLATSSKQAGEIWSLIRTCSGANTSSKDVNAVPFSDVEDSSSAILVIKEEEQTSSSTDDEDEDSLEPMVTIPVSKDGNVEVETHDMDIEIKTEFENGTPAEITAIELGRALDDTQIFSKLCQALKSNNNWKQVVVVPSFYLKDPETMLNYIKRNVKSIDCHSFAMTLQKIDKNLLSLIKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -