Basic Information

Insect: Stomorhina lunata
Gene Symbol: -
Assembly: GCA_933228635.1
Location: CAKOFY010000198.1:52004-66803[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 7.4 5e+02 2.0 0.6 2 23 410 432 409 432 0.91

2 15 0.013 0.88 10.7 0.2 6 23 442 459 442 459 0.99

3 15 0.00016 0.011 16.7 2.0 1 23 465 487 465 487 0.98

4 15 3.2e-05 0.0021 18.9 2.9 1 23 500 523 500 523 0.92

5 15 3.3 2.2e+02 3.1 0.6 1 10 531 540 531 546 0.83

6 15 3.3e-05 0.0022 18.9 2.1 3 23 587 608 585 608 0.92

7 15 0.028 1.9 9.6 0.4 2 23 620 642 619 642 0.96

8 15 0.00086 0.058 14.4 5.3 1 23 649 672 649 672 0.93

9 15 3.3e-06 0.00022 22.0 0.7 1 23 678 700 678 700 0.98

10 15 0.00018 0.012 16.5 1.3 1 23 706 729 706 729 0.97

11 15 0.0082 0.55 11.3 1.0 3 23 810 831 809 831 0.96

12 15 0.019 1.3 10.1 1.0 2 23 840 862 839 862 0.95

13 15 0.00014 0.0096 16.8 1.3 1 23 869 892 869 892 0.93

14 15 4.8e-06 0.00033 21.5 1.7 1 23 898 920 898 920 0.98

15 15 1.8e-05 0.0012 19.7 0.9 1 23 926 949 926 949 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	7.4	5e+02	2.0	0.6	2	23	410	432	409	432	0.91
2	15	0.013	0.88	10.7	0.2	6	23	442	459	442	459	0.99
3	15	0.00016	0.011	16.7	2.0	1	23	465	487	465	487	0.98
4	15	3.2e-05	0.0021	18.9	2.9	1	23	500	523	500	523	0.92
5	15	3.3	2.2e+02	3.1	0.6	1	10	531	540	531	546	0.83
6	15	3.3e-05	0.0022	18.9	2.1	3	23	587	608	585	608	0.92
7	15	0.028	1.9	9.6	0.4	2	23	620	642	619	642	0.96
8	15	0.00086	0.058	14.4	5.3	1	23	649	672	649	672	0.93
9	15	3.3e-06	0.00022	22.0	0.7	1	23	678	700	678	700	0.98
10	15	0.00018	0.012	16.5	1.3	1	23	706	729	706	729	0.97
11	15	0.0082	0.55	11.3	1.0	3	23	810	831	809	831	0.96
12	15	0.019	1.3	10.1	1.0	2	23	840	862	839	862	0.95
13	15	0.00014	0.0096	16.8	1.3	1	23	869	892	869	892	0.93
14	15	4.8e-06	0.00033	21.5	1.7	1	23	898	920	898	920	0.98
15	15	1.8e-05	0.0012	19.7	0.9	1	23	926	949	926	949	0.97

Sequence Information

Coding Sequence: ATGGTGAACAAATGCCTTCTGTGTCAGGAGCATCCAACGATTCCAGGTCCAAAGTTTTTAGAAATATTTGGAGATGAAGGCTTACGTCTCGATATAAGTGCTATTATTAACAAACATTTTTGGTTAAAGACAAACAGAAACAGTGAAGATGTACAGCGAGTGTGTATGACTTGTTGGGAGGTAGTAAGAGATTTTCATATACTCTATCAGAGAGTAGAAGAAGTTCATAAGCATATAGGGGTTAAAACTATAGTATTAGATGACCCGCTACCTCAGGATGTTATGCTTAAGTCCGAAGATGACCCGTCTAATGACCAAGATCCTATTATGGGTGATAACTCTATAGGTGAATCCATATTTGATCCAGAAGTAAAAGTTGAGGTTCATGATTTGGATTTGTTGCCGCAGATAGAAATACTTGAGACTGCAAATGTTCCTGAAAGGGGTGGAAGAGCAAATCGACGTGGACGTGCCGTCGCTAGGGAGCAAAGTCCAAAGGTGTCGACAAAGCGAATTAAGAAGGAACAATCCCCTATAGCTGATGCAACAGATGTTTTCGCTTCAAATGAAAGTCTCGACAAAGATGGCTTAAATGAGTCTCCATCTTTGGAGGATCTTAGCTATACACTACTCGCAAATTCATTGGATAGAGATGAAGGCGGAAGTAAAAGAAGAGGGCGACCCCGTAAAGGAGATAATGAAAAGGCGAAAACCACTACGCCGCGTAACAAACGCTCAAAGAAGCAGTTGCTACAAACAACGGAGACAGCAATCAAAAATGAAAAAGATGGCGAAGATCAACCATCTTGTTCTACAGCACAACAGTCTGAAGGCTCTGGGGAGACAAAAATTAAAACTGAAAATCCCTCAGACGAACAAAACGATGATATAACAGCTGCAGCTGATCTTCTTGATGACGACGATGCTTACGCACAGGATGACTATGATGACGATAATGATAATAACTACACAAAGGATTCGGACGATTCCTCAAACGCAGAGTCAGAATTAGAAGATTCTAACGATTCAGACTGGGGCGGCGAGGCTCCAAACAAGAAGGAGAAATTTGCTGTTATAATGAAAAAAGAGCGTTCTGTCCCAAAGAAATACAAAAAGAGAGAAAAGCCTTTGGTGGAACCCAAACGCATGAGCCGGGAAGAAATCGAAGCTCGCCAAGCCCAACAGGCAGAATACGATAATATTATTACGAAATTCTTTGAAAAATTACGTTGTCCCAAGTGTGAACTTTTGGTTCATACCTTCGGAGAAATGCGTGCTCATTTCCGTTTAGATCATAATGATGATCACGGCTTTGTTGAATGCTGTGGACGTCGATTTACAACACGGAAATTTTTAGCTGAACACATATTGGTTCACTACAATCCCGAACATTTTAAGTGTAAAACATGCGATAAAGTCTGTCGTGATTCTACACAATTGGAGGGTCACGAAATCACTCATTTACCCAATCCACCACCTTCCAAATATAAAAAAACGTTCCAGTGTGAAAAATGCTCCAAGACATTTTCCTCAAAAGCTTCATTCGAACATCATATGGTGGCTAAACATGTACCGAGAGAAGAATTTAAATTTGAATGTCCTGAATGTAAAAAGAACGTTTACAAAAGTGGTAAAAATACAATGAATAAAAAGTTAAATGAAATATATAAACAAATGGATACTCTCTCTTTATGTCCCACTGATACAAAGCTGAAAGATCACATGCGCAGTGTCCATGATCCCCAGAGAACGGTGATAtgtgataaatgtggcaaaacatttaaaagtacctacagtcttaaaaaacatcacgaactggaacattctgatgcaccaaaacccatacccattccacaacaatgtgaaatttgtggtgcctggctaagacacttgtcgggtctaaaacaacacatgaaaaacattcacgaaggcgtgcagacagaacatcgttgtcacatttgcaataaagtttcatcaacagctcgggctcttaagaggcatatatatcataatcatgagtgtataaagaaattccagtgtaccatgtgtgataaggcatttaaaagagcccaggacttaagggaacatacttccgttcataccggtgaggtattatatacatgtcccaattgtcccatgacattcttttcaaatgccaatatgtataaacatcgGCAACGTTTGCATCGTGCTGAATGGGAGGCGGATCGCAGCAAACCTATACCACCTAATATTATGAGACAAGCTAAACAGGGCAGTAAATTTATTAAACCAAAACGTGCTCCTGGTGAAACCACACCTTCTCATTTGGTAACACCAGTACCCATCATACCACCGTCAGCGGTTTTAAATCCCCAGATATTATGGCCATCAAAAGCTAAACTACAAAAACATATGTATTGTCATGACGCAAGTAGACAGAAAATATGTGATCAATGTGGCAAAGCATTTGCCTGCAATTCCAGTATGAGAAAACATGTTGATACCGAACATTCCGAAGTTAAACCCGAACCGCAACAGTGTAAAATTTGTAATACCTGGTATCGAAATGTGTCCGGCTTAAGGACTCACATGAAGTTTATGCATGAAAATGTAGGCGGTGAACATCGTTGTAGCATCTGTAATaaagtatccacaaatgcacgagctctaagaaggcacatatatttaaatcacgaatgtgaaaggaaatataagtgtcacatgtgtgagaaggcatttaaacgagaacaagatttgagagaacacatctccgtacatactggcgaggcattatatacttgtcccaattgtcccatgacattttcttctagcgccaatatgtacaaacatcgtcaaCGTTTACATAAGGCTGAATATGCAGCCCACAAACAGCAACCAATGCCAGTCAATATTATAAAACAAGCCAAGTCTGTACCGAATACAGTGCGTACTAAAAGACGCATGATTGTAGAACCTCCACCACCTGCTGATGTAATAATGCCAGCAACTTCAGCTTTGCTAAATCCTCAGCTTATCTTTACCTCGCAATATGCCGTTATGGCACCGAATTTGACTAAATATCAAGATTAA
Protein Sequence: MVNKCLLCQEHPTIPGPKFLEIFGDEGLRLDISAIINKHFWLKTNRNSEDVQRVCMTCWEVVRDFHILYQRVEEVHKHIGVKTIVLDDPLPQDVMLKSEDDPSNDQDPIMGDNSIGESIFDPEVKVEVHDLDLLPQIEILETANVPERGGRANRRGRAVAREQSPKVSTKRIKKEQSPIADATDVFASNESLDKDGLNESPSLEDLSYTLLANSLDRDEGGSKRRGRPRKGDNEKAKTTTPRNKRSKKQLLQTTETAIKNEKDGEDQPSCSTAQQSEGSGETKIKTENPSDEQNDDITAAADLLDDDDAYAQDDYDDDNDNNYTKDSDDSSNAESELEDSNDSDWGGEAPNKKEKFAVIMKKERSVPKKYKKREKPLVEPKRMSREEIEARQAQQAEYDNIITKFFEKLRCPKCELLVHTFGEMRAHFRLDHNDDHGFVECCGRRFTTRKFLAEHILVHYNPEHFKCKTCDKVCRDSTQLEGHEITHLPNPPPSKYKKTFQCEKCSKTFSSKASFEHHMVAKHVPREEFKFECPECKKNVYKSGKNTMNKKLNEIYKQMDTLSLCPTDTKLKDHMRSVHDPQRTVICDKCGKTFKSTYSLKKHHELEHSDAPKPIPIPQQCEICGAWLRHLSGLKQHMKNIHEGVQTEHRCHICNKVSSTARALKRHIYHNHECIKKFQCTMCDKAFKRAQDLREHTSVHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRSKPIPPNIMRQAKQGSKFIKPKRAPGETTPSHLVTPVPIIPPSAVLNPQILWPSKAKLQKHMYCHDASRQKICDQCGKAFACNSSMRKHVDTEHSEVKPEPQQCKICNTWYRNVSGLRTHMKFMHENVGGEHRCSICNKVSTNARALRRHIYLNHECERKYKCHMCEKAFKREQDLREHISVHTGEALYTCPNCPMTFSSSANMYKHRQRLHKAEYAAHKQQPMPVNIIKQAKSVPNTVRTKRRMIVEPPPPADVIMPATSALLNPQLIFTSQYAVMAPNLTKYQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00200056;
90% Identity: -
80% Identity: -