Slun013765.1
Basic Information
- Insect
- Stomorhina lunata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_933228635.1
- Location
- CAKOFY010001045.1:113297-123890[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1 2.6e+04 -26.0 36.7 44 156 42 176 2 244 0.55 2 5 0.32 8.3e+03 -3.7 4.8 29 78 204 249 175 266 0.48 3 5 0.17 4.4e+03 -2.8 5.1 23 95 264 339 261 347 0.60 4 5 4e-116 1e-111 373.6 25.6 1 299 369 665 369 666 0.93 5 5 0.073 1.9e+03 -1.6 3.7 220 245 694 719 669 740 0.47
Sequence Information
- Coding Sequence
- ATGTCAGTGGAACAAAAATCAACTGATAAAAATGTTGTGACTACATCAGTAACAACACCAACAACAAAATCTAACAAAAAGAACAGCAACAACAATAGCAAAAGTAGTAGTAATAGTAGCAACAGTAAAAAATTCATTAAAAAGGCTTTGAAAACTTCAAAAAGTAAAAAAAAATCAAATGCTAATGTTGCTGCTGCGGCTAATGTCAACAACAATGACAACAACAACACAAGCACTTCCAGCAGCAACAACAACAATGTTGAAATGGCAAACGATGAAATCATCGAGGAGTTGTTTGATTTTGACGATACCGACTTAAAAGAACTTGATAATAATGAGAATACTGAAGAGTTTTCGGACAATATTAACTATATAATTAAAAAAGAGCTTGAAAATGAAGCTAAGGAAAGGCTAAAAGAACTGGAGAATAAAGAAAAGGACAATGAGTCCGGAGAAGTGCAGTTGCAAACATTAACTAATGCTAATGATAAGAATAATAATAATCATGATGATAAAGAGAGGAGAGAGGAGGAAAAACAACAAGAGCAGCAACAACCACAACAGGTGGAAGACTTATTATCGTTGCCAATTGATAACATTGATAAACAAAACGTAGAAGAAAATGATGATGATAAACAAACAGACAATGAATTAGCCACGACAATGACACCAGCAACGACAGCGTTAACGGCTGAAAAGACTGCAAATATTCAAAGCGAAAAAGGAAATGAAGAAGATAATAATTATATTGATAATGCACAACAAGAGTCAGAACCTCCAAAAGAAAGCCTCACCAAACAAGGCAAAGAAAATGAGGAAGATCATGAATCCAATCAAAATAAAGACTTAAATAGTGCCATGGAAATCATCAAAGATAATTCTCAAAGTCCAACTGACAATGAAATCTTAACATCAGCTCCATCTCCAGACATAAAGTCTAAGCAAACAAATGATGCATCATCAGACATTGACTTGACTGGAAATAGTAAAGAAACTAATAACGAGAACAATAATAATGAGGATTTAAATGAAGATTATGATGATGAGTATGCTGAACCGTATGATGAACTATTAGTTCAATTTCTTGATGAAGCCAATCAGATTGCTGAGGCTAGATTAGCTGCTAGAAGGCATGCCCGGGCGGAGGCTCGAGAAATTCGTATGAGAGAATTGGAACGCCAGCAGAAAGAACAAGAATCTAATGCAGATCGTGTATTCGATATGCATTCAAATGTAACAGGCATTACACCGCTGTCACACATGCGTCTTGGCTTGGGAAGTTCACCAGTTACTGGCTTACTAAACTCCACACGAGGCAATTCAATGTCATCCAGGCGCAGTAGTGAAGACTCACTGGAAGAAGAGGGACGCAGCTTAAGAGATATACGTCATGAGTTAAAGGATGTTGAAGAACGGTTTCGCAAGGCTATGATAGCGAATGCGCAGTTGGATAATGATCGTGCCTCACAAACCTATCAGATACAGTTGCTTAAAGACAAACTGGAAGATATGGAAGAGTCATATTTTCAACTGCAGCGTGAGTGTAAGGAAAAGACACGCGATTGTAATGCGTTGAAGCGTTCGCTGGATAAACTAAGTGAAGAGCTTAAACTGGTACAGGGTCAGCTCGATGAGCGTGACACACTGATAGCAGAACAAGGTTTAGTTATTGTGGCTATTGAAAATGAGGATGGCACTGATGCCAAACGTGCTCTAGTCAGTGTTGAAAATGCACAATTATTGGGTTCGGTACAGGGATCATTAGATGTTCGAATTAAGAAATTTAGCGAAGAGAAACAACAGCTGCAACACGAAGTCCAACAGTTGCAGGAACAATTAGAAACCTATAAAAGTCAGGGTAAGGGACGTGGCAAGGGTAGTTCTTCAAATGGTCCTTTAGGTTCAGACGATGATGATTATGAAGCTCAAAGAGAAGCCAATAAAATCATCTCGGATTATAAATATAAATTACAAAAAGCTGAACAGGAAATTGCTAGTCTACAATCAAGTTTAGCTCGTTCTGAGACACAGGTTATACGTTATAAAAGCACAGCCGAGGCTGCTGAGAAAGCTGAAGCCGAACTTAAAATCGAAAGGagaaaactgcaaagagagAATCGCGAGGCAATGGAAAAGCTCGAAGAGTTGGAAACCTCAAATAATCATCTTCTTAAACGTCTGGATAAATTAAAGAACGCCAAAAGTGCTCTGCTTAAGGACCTCTGA
- Protein Sequence
- MSVEQKSTDKNVVTTSVTTPTTKSNKKNSNNNSKSSSNSSNSKKFIKKALKTSKSKKKSNANVAAAANVNNNDNNNTSTSSSNNNNVEMANDEIIEELFDFDDTDLKELDNNENTEEFSDNINYIIKKELENEAKERLKELENKEKDNESGEVQLQTLTNANDKNNNNHDDKERREEEKQQEQQQPQQVEDLLSLPIDNIDKQNVEENDDDKQTDNELATTMTPATTALTAEKTANIQSEKGNEEDNNYIDNAQQESEPPKESLTKQGKENEEDHESNQNKDLNSAMEIIKDNSQSPTDNEILTSAPSPDIKSKQTNDASSDIDLTGNSKETNNENNNNEDLNEDYDDEYAEPYDELLVQFLDEANQIAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSNVTGITPLSHMRLGLGSSPVTGLLNSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYFQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLDERDTLIAEQGLVIVAIENEDGTDAKRALVSVENAQLLGSVQGSLDVRIKKFSEEKQQLQHEVQQLQEQLETYKSQGKGRGKGSSSNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -