Sbis074594.1
Basic Information
- Insect
- Stictocephala bisonia
- Gene Symbol
- -
- Assembly
- GCA_035578905.1
- Location
- JAQJVL010000561.1:482613-484325[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.014 7.2e+02 2.8 0.1 10 22 60 72 57 74 0.93 2 12 0.013 6.6e+02 2.9 0.0 10 22 88 100 83 102 0.92 3 12 0.014 7.2e+02 2.8 0.1 10 22 116 128 113 130 0.93 4 12 0.014 6.8e+02 2.8 0.0 10 22 144 156 140 158 0.92 5 12 0.01 5e+02 3.2 0.0 10 22 198 210 190 212 0.88 6 12 0.014 7.2e+02 2.8 0.1 10 22 226 238 223 240 0.93 7 12 0.013 6.6e+02 2.9 0.0 10 22 254 266 249 268 0.92 8 12 0.013 6.6e+02 2.9 0.0 10 22 282 294 277 296 0.92 9 12 0.014 6.8e+02 2.8 0.0 10 22 310 322 306 324 0.92 10 12 0.014 7.2e+02 2.8 0.1 10 22 338 350 335 352 0.93 11 12 0.013 6.6e+02 2.9 0.0 10 22 366 378 361 380 0.92 12 12 0.17 8.6e+03 -0.7 0.0 10 21 394 405 391 406 0.92
Sequence Information
- Coding Sequence
- ATGCAAACAGGGAGTTTGTTAAAGACTCATCCCCAGATCACCGTAACTTTCTGCCAACACGACACGAAAACGGTAGACAAGAAACACATCTGCTTGTGTAAGATCTGTAACAATCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGTGTCAACATCAAGACTACAACAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGCGTCAACATCAAGACTACAACAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGTGTCAACATCAAGACTACAACAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGTGTCAACATCAAGACAACAACAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGTGTCAACATCAAGACAACAACAATGTTCGCAGCTGTAACAACCGGACTATCACAGGAACTGACACCTTCCTATCTGCGCGTCAAAATCAAGACTACAACAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGTGTCAACATCAAGACTACAACAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGCGTCAACATCAAGACTACAACAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGCGTCAACATCAAGACTACAACAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGTGTCAACATCAAGACAACAACAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGTGTCAACATCAAGACTACAACAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGCGTCAACATCAAGACTACAACAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACATAGGAACTGACACCTTCCTATCTGCGTGTCAACATCAAGACAACAGCAATGTTCGCAGCTGTAACAACCGGACTATCGTAGACACAGGAACTGACACCTTTTCGATGTAG
- Protein Sequence
- MQTGSLLKTHPQITVTFCQHDTKTVDKKHICLCKICNNRTIVDIGTDTFLSACQHQDYNNVRSCNNRTIVDIGTDTFLSARQHQDYNNVRSCNNRTIVDIGTDTFLSACQHQDYNNVRSCNNRTIVDIGTDTFLSACQHQDNNNVRSCNNRTIVDIGTDTFLSACQHQDNNNVRSCNNRTITGTDTFLSARQNQDYNNVRSCNNRTIVDIGTDTFLSACQHQDYNNVRSCNNRTIVDIGTDTFLSARQHQDYNNVRSCNNRTIVDIGTDTFLSARQHQDYNNVRSCNNRTIVDIGTDTFLSACQHQDNNNVRSCNNRTIVDIGTDTFLSACQHQDYNNVRSCNNRTIVDIGTDTFLSARQHQDYNNVRSCNNRTIVDIGTDTFLSACQHQDNSNVRSCNNRTIVDTGTDTFSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -