Sbis138194.1
Basic Information
- Insect
- Stictocephala bisonia
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035578905.1
- Location
- JAQJVL010009087.1:1-12444[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-33 2.3e-28 102.4 0.9 178 300 35 154 27 154 0.81
Sequence Information
- Coding Sequence
- ATGTTTTGGATCGGTAGCATTTGGCCTCACAATGAAACTTTGGGCTCCTTCGGCCTAAACGCCTTCAGACAATCTGGTGAGTTTTTTTCATCGGTGTCGGGGGAGAAAGGCCTGGTAGTAGTCGAGGGTGATGGTTCATGGTCAGACGAGGAGAGCGAAGGCCAGGAGACCAACACTCCCAGACCACCTAAGAAGGCTCTTGTCTCCGCAGAAGTTGCAGATGTTTTACAACAGGGTTCAGGCTCtctagATGTGCGGCTCAAGAGGTATGTGGAAGAGCGTAATGAGCTTGTAGACGAACTGCGGAGGGTCAAACTTCAGCTGGAAGAGGAGCGTGCACACTCGCGTGGTCGACAATCCAACGGACCCACTGATGACAGTGACGATGTCAACAGAGAAGCAAGTAAGCTGCTGGGAGACTATAAATTTAAACTTCAAAAGGCTGAACAAGACGTCAATACTCTTCAAGCAAAT
- Protein Sequence
- MFWIGSIWPHNETLGSFGLNAFRQSGEFFSSVSGEKGLVVVEGDGSWSDEESEGQETNTPRPPKKALVSAEVADVLQQGSGSLDVRLKRYVEERNELVDELRRVKLQLEEERAHSRGRQSNGPTDDSDDVNREASKLLGDYKFKLQKAEQDVNTLQAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -