Sbim024836.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Stenus bimaculatus
Gene Symbol
Hr39
Assembly
GCA_963971135.1
Location
OZ020182.1:54426313-54431029[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4 4.7e+04 -6.4 9.4 67 164 136 206 95 260 0.40
2 4 0.65 7.5e+03 -2.7 4.6 47 114 199 270 173 314 0.53
3 4 1.6e-08 0.00018 22.4 0.0 1 28 385 412 385 504 0.69
4 4 7.3e-73 8.5e-69 234.3 0.3 205 408 509 707 489 707 0.97

Sequence Information

Coding Sequence
ATGGCCACGGATATGAGGTCCCCGAACGTCTCCGTGACCCCCATTAACGTGGAGCCCTATCCTCCCGTCGCGTTGGTCAATGGCGACCACGAAAACGCGCGAAATAATGGAGAAGTCCTGGACAGCTCGGACGCTGAGGTCGCTCAGATCGACTTCCAATCCATGGTCAACATGAGGAACAAAAAGAAACGACCTGGAGCAGACCCCGACTGTGATATCCCCAGACCCATGTCGTGGGAAGGAGAACTCTCAGATGGAGAAAGGGGAATGTGCATCGATGATGAAAATAGTGCACAGaTTCCTGAAAACTTATCTTTGCAACCACAAAGTGGCAATAACAAGCACGTGCAGGTGCTAGTGCAAAACGACTCCAAAGAGAGTCCGATCATGAGACTGAAACAAACCCCGATGAGCAATTATTCTTTGCACTCCACTCCAAGCAACTCGCCGTTGTTGTCTCAAAGACACCCCTTACCCATGTTAGTACAGAAGGAACTCATTCACAAGGATATGATGCATAAAGCTTTAAACGTTCCACCAACACCTAGCCCTGATTCAGCCGTCCATTCCGGATACAGCGTCTTCTCATCGCCCACCCAAAGCCCTTTAACGCAAAGGCACGTCACACTCACCCCCAACCTCAGCCGGAACAATAGTGATGCTTCCCATTCCAGTTGTTGCAGCTACTCCAGTGTGTCCTTATCCGTTTCACCCACACAACAATTTTCACCAACCCACAGCCCTATACAGGGCCGTCACATGCCAAGAATCCACAACAGCCCGTTACATCACAACATCTTATACCGCAGCTTGCAGGAAGACCCCAACTCGCAATACTCATCAGAacttgaaaatttagaagaaaacgATGATAAATCCAGCCTAGTTCACGCTTCATTACCTGCACAACCCGGAATATCAAGGCAACAACTTATTAATAGcCCATGTCCTATTTGTGGTGATAAAATATCAGGATTTCATTACGGCATCTTCAGTTGCGAATCATGTAaaggtttttttaaacgtaCCGTGCAGAACAGAAAAAATTATGTGTGTTTACGAGGCGCTTCATGTCCAGTCACTgtttcaacaagaaaaaaatgccCGGCATGTCGTTTCGATAAATGTTTACAATGTGGAATGAAACTCGAAGcaATAAGAGAGGATAGAACTAGAGGTGGTCGATCTACATATCAATGTTCGTACTCTTTACCTCCTTCGTTGGCTAGTCATCCGGAATTAAGGGCCAGTTCAAGTGACTTAAGGGAATCACATTTGGGGTTAACTGTAAAACAGGAGCCACTCGATAGTTTAATCacgcataaaaaacaaaattcgagGCATAGCGTCCCACCGTTATTGCAAgaaataatggACGTGGAACATCTATGGCATTATAGTGAGTTAGAATTAAATCGATTAAACACCGAAGGTAATCTTGGTAAAGAAGGGGGTAGTGGTGCAGTTCATAATTTATCAACGCATCCTTTATTAGCGGGGACAGCCCTGGCGGGTTCAGCTGATACGAATCCTGATTTCGTAGCGAATTTGTGCAATATCGCTGACCATCGTCTCTACAAAATTGTGAAATGGTGTAAAAGCCtacctttatttaaaaacatttccattGATGATCAAATTTGTTTACTTATTAATTCCTGGTGTGAATTGCTGTTATTTTCGTGTTGTTACCGATCAATGCTAACACCTGGTGAAATCCGAGTCTCCTTGGGGAAGAGCATAACATTAGCGCAAGCGCGTGATTTGGGGATGCAAGCTTGTATCGAAAGAATGCTTAATTTTACCGAGCAATTAAGGAGGTTAAGAGTTGATCGATACGAATATGTTGCCATGAAAGTAATCGTTTTATTAACATCAGaTACATCAGAGTTAAGAGAAGCTGAGAAAGTTCGAGTATCTCAAGAAAAAGCGTTGAAAGCTTTACAAGATTACACGCTGAATCATTACCCTGAGAGCCCTGCGAAATTCGGTGAATTACTTTTAAGAATTCCCGAGCTGCAAAGGACCTGCCAGGTTGGTAAGGAAATGTTAACGATAAAATCGAAAGATAATGAAGGCCCTAGCTTCAACTTGTTGATGGAGCTACTGAGAGGGGACCACTAG
Protein Sequence
MATDMRSPNVSVTPINVEPYPPVALVNGDHENARNNGEVLDSSDAEVAQIDFQSMVNMRNKKKRPGADPDCDIPRPMSWEGELSDGERGMCIDDENSAQIPENLSLQPQSGNNKHVQVLVQNDSKESPIMRLKQTPMSNYSLHSTPSNSPLLSQRHPLPMLVQKELIHKDMMHKALNVPPTPSPDSAVHSGYSVFSSPTQSPLTQRHVTLTPNLSRNNSDASHSSCCSYSSVSLSVSPTQQFSPTHSPIQGRHMPRIHNSPLHHNILYRSLQEDPNSQYSSELENLEENDDKSSLVHASLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGASCPVTVSTRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLASHPELRASSSDLRESHLGLTVKQEPLDSLITHKKQNSRHSVPPLLQEIMDVEHLWHYSELELNRLNTEGNLGKEGGSGAVHNLSTHPLLAGTALAGSADTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCYRSMLTPGEIRVSLGKSITLAQARDLGMQACIERMLNFTEQLRRLRVDRYEYVAMKVIVLLTSDTSELREAEKVRVSQEKALKALQDYTLNHYPESPAKFGELLLRIPELQRTCQVGKEMLTIKSKDNEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01186248;
90% Identity
iTF_01371358;
80% Identity
iTF_01371358;