Sbim029578.2
Basic Information
- Insect
- Stenus bimaculatus
- Gene Symbol
- lilli
- Assembly
- GCA_963971135.1
- Location
- OZ020183.1:32125616-32133437[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-09 9.7e-05 23.2 14.6 407 500 35 129 21 135 0.72 2 2 0.011 5.3e+02 0.9 28.1 73 232 136 295 129 325 0.58
Sequence Information
- Coding Sequence
- atgaagctacatcCTGGCTTTCATGCTTCTAATATATTGTATCTTTATTCTCTTATAGCACCAAACCTTGAACCTGAACAAGAACCAGAACCACAGCAGATTTCGTCGAATCCACCACCAgggattcttgaagatGACCTTAGGATTTCTGACAACAGGGATGAGGAGCACGAAAGGAATAATCCGGTTCCTAGaatgctGTCACCAATAGCGATGACACCTCCAAGTAGCACAACGATTGGAAAAAGAGTACCGGAACCAATTCATTCAAAGTCACCAGTGAAAAATTCATCAAGTGATTCGGCTAGAGATTCCAGATCAGACAGTGATTCGAGTAGTGATGATTCAGCTGTAGAGAATGTAAAAGCAGTTACTCCACGCCCGTCTAAAAGTCTTGTACCTTCACTTCATTCTCCTAAAAAAGTAGAAgaggaaaaagaaaataaatctaGGAAGAATTTTGTTTCACATTTAGACCCAAATGTGGAATCTGACAGTAGTGCAAAGAAGAAAAccttaataaaaagaaaacctAAAGCCAGTGTAAACGATAGTGACATTAAAAGACAAAAGAGGAAAAGACACAACAGTTTTAGTAGTGTATCTTCATTATCCACAATAACTACTTTATCTCCTAGTAGCCAAAGGAAAAAGGAACACAAAGAAGAAAAGAGTCATGAGTCTAAAACAAGGAAAACTGATGAAGAAAATGCCTCTTTGaagagtttttatgaaaaatcacAAGACAGGGAGAGGGAACGTAAAACAGAAGGACCTCGAACCACACTAAAGGTTTCACCAATGGAACCTACTAGTACGAGTACGAGTTGTTCTCAACCTATACTTGAATATCATTCGTACCTTGAGAAGTCTGATgaagaaagaAATCAACATGTGTATTCTGCTATGTACCTAAATAAATCTAGGAGGCTAATACACTTGGCGGATGAAGAGACTGATACAACAAAACAATGCATGTTGTACCTGGAAGCTGTGCTTTACTATTTACTAACTGGAAATGCGATGGAGCATGAAAGTATAAGTGAAAAATCTGTCTTCACTATGTACACAGATACTCTTGGTATAATTAAatatatATCTTCACAACTCAAAATCCAAGATACTTCTTATGTCCGCAATAAGTTAGCTATCTTAAAttaCCGGTGCCAAGCGCTTCTTTATTTCAAACTTTTCAAGATGAGGCGGGTTGAAATGAAGGATTATAAGAAATTAACTTTTGAATTTTGCAATAAGtCTGCCAATGCTCCACCAATTCTATCTGACCAGATCAACCAAACTCTCGGAGGACAAGGAACTCCATCGCCAGCTGGATTTGTGGAGAGTCAATCATCAGGTTATGGAAGTGGTGCAGCCTCCACAATACCTTCCAAGCTAGTTCCAGTTTCAATTTACAATTCACTGAAGAAGCAGAATGAACACTTGCAAAGTCTTCAATATTCTAAAGAAATTTGGGAACACACTGATGATATTTTAATCATAGATAAACACGCAGACGTggACATTCGTGGGCCGTGGGCCGAAGAAAACCCACATGAGATTTGTGAAGATCGTTTCCaacaacaattttcattaaacgttAGGGTCGGAATTGTGGGTGATTTTCTTATTGGACCAGCATTTCTACCTCCAAGGCTTACCGGTGAAGCATATCggatttttttggaacaatCGCTACCATGTTTGTTAGAAGATGTACCATTGGCGACGAGGAATGTAATGTGGCTAATGCATGATGGAGCTCCAGCGCATTTTAGTTTGGTTGCTCGTGAGTTCCTGAATCTAAACTATCCTAATAGGTGGATTGGACGCAGTGGTCCACAACCATGGCCTCCTCGATCCCCTGATTTAaatcctttagatttttttctatggggccatatgaaatcattaatttatcagactccggtagaaaatttagaagatctAAGAACTCGAATAATTAACGAATGTAATTCGATAAGAAACAATCCTGGTATCTTTGAAAGAGTTCGCCAATCGATGAGAAGAAGATTGGATTCTTGTTTGCTAGCTAATGGTtctcattttgaacacttattgtaa
- Protein Sequence
- MKLHPGFHASNILYLYSLIAPNLEPEQEPEPQQISSNPPPGILEDDLRISDNRDEEHERNNPVPRMLSPIAMTPPSSTTIGKRVPEPIHSKSPVKNSSSDSARDSRSDSDSSSDDSAVENVKAVTPRPSKSLVPSLHSPKKVEEEKENKSRKNFVSHLDPNVESDSSAKKKTLIKRKPKASVNDSDIKRQKRKRHNSFSSVSSLSTITTLSPSSQRKKEHKEEKSHESKTRKTDEENASLKSFYEKSQDRERERKTEGPRTTLKVSPMEPTSTSTSCSQPILEYHSYLEKSDEERNQHVYSAMYLNKSRRLIHLADEETDTTKQCMLYLEAVLYYLLTGNAMEHESISEKSVFTMYTDTLGIIKYISSQLKIQDTSYVRNKLAILNYRCQALLYFKLFKMRRVEMKDYKKLTFEFCNKSANAPPILSDQINQTLGGQGTPSPAGFVESQSSGYGSGAASTIPSKLVPVSIYNSLKKQNEHLQSLQYSKEIWEHTDDILIIDKHADVDIRGPWAEENPHEICEDRFQQQFSLNVRVGIVGDFLIGPAFLPPRLTGEAYRIFLEQSLPCLLEDVPLATRNVMWLMHDGAPAHFSLVAREFLNLNYPNRWIGRSGPQPWPPRSPDLNPLDFFLWGHMKSLIYQTPVENLEDLRTRIINECNSIRNNPGIFERVRQSMRRRLDSCLLANGSHFEHLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -