Sbim008936.1
Basic Information
- Insect
- Stenus bimaculatus
- Gene Symbol
- retn
- Assembly
- GCA_963971135.1
- Location
- OZ020181.1:13872470-13877701[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-20 1.8e-16 61.6 0.0 15 89 72 144 60 144 0.93
Sequence Information
- Coding Sequence
- ATGTTGCACGTTCTAGTTTTGATGCCAATTGTTCTCCGTGTTGATGCCAGAACATCGCTTGGCATCAAAGTGAAAACAATATTCTTTGATTTGTCTTCATTCATCTTGCTTATAAATCAAGTATTGGCTTCTGAAAATGACTCAAGAAGATCTCCATCCCTCTGGAATATCGTTGCATCATCGGCAAATAGTATTGATTCATTCTTATTAATTGCTGATGGCACGCCTATTAACCGACTGCCCATTATGGCCAAATCAGTATTAGATCTCTACGAGCTTTACAATTTGGTGATAGCCAGAGGTGGATTGGTCGACgtaataaataagaaattatggcaagaaattattaaagggCTGCATCTTCCTTCCTCCATCACATCAGCAGCTTTCACTCTTCGAACACAGTATATGAAATACTTGTATCCATACGAATGTGAGAAGCGTCGTTTTAGTACCCCTGCAGAACTACAAGCCGCAATCGATGGGAATAGAAGAGAAGGTCGTCGCAGTAGTTATGGTCAATATGATTCGGTACAAAGATCCCCAAATCCTTCCCAAATTTCCCCGTTATCCTTGGTGTCACAGCAGCAACACTTAGCTGCAAGGATGAACTCGGTAATGGCTGGTGGATTAGGTCTTCACAACGGTGTTCACCACCCAAGCCACCCAACTCCAATGGGACAACCTATGAATTCTGGGCCATTACCAGGTTTAGCTCCTAGCGAATTCGAAGCTCGAATGATGGAGTACGTGAAGCTTTTGAATAAGGAAATAAGAAGTTCTGCTTCGACACCACCTAGACAAGGAGATTCCTCGCCTCCAAGTGCAACATCTCCTCTTAACCCTCTGGAAATGACTAGGATGAGTCTGTGGAATTTGTATAACAATAACCAGCCGCCGATAGAACCACAAAAGGAAGCGCTAAATTTATCAGATTCGTCGCCGCCGAGCATTAAAAGAGAACCAGAATTAAGAGAAACTTCACCACCAGCTAAAAAGTTCCTTAAAGAAGACGAAGAACAACCTAAACCAATTCCTGCGGCTACTCACATTAAAATTAACACCAGGGGTGATATTCGATCTGGTGATAATTCATTAGTTGTAAGTATGGAATTGAATGGTATAACATATCAAGGAGTTTTATTCGCACAGTCATCACCTGATCGGACTGCGATAGCATCATAA
- Protein Sequence
- MLHVLVLMPIVLRVDARTSLGIKVKTIFFDLSSFILLINQVLASENDSRRSPSLWNIVASSANSIDSFLLIADGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRFSTPAELQAAIDGNRREGRRSSYGQYDSVQRSPNPSQISPLSLVSQQQHLAARMNSVMAGGLGLHNGVHHPSHPTPMGQPMNSGPLPGLAPSEFEARMMEYVKLLNKEIRSSASTPPRQGDSSPPSATSPLNPLEMTRMSLWNLYNNNQPPIEPQKEALNLSDSSPPSIKREPELRETSPPAKKFLKEDEEQPKPIPAATHIKINTRGDIRSGDNSLVVSMELNGITYQGVLFAQSSPDRTAIAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01184290;
- 90% Identity
- -
- 80% Identity
- -