Basic Information

Insect: Stenurella melanura
Gene Symbol: stc
Assembly: GCA_963583905.1
Location: OY757311.1:59315727-59335298[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.2 6.6e+04 -3.7 3.0 6 10 86 90 82 90 0.61

2 17 0.96 2.9e+04 -2.5 0.3 4 10 116 122 116 122 0.90

3 17 9.9e-06 0.3 13.4 13.7 3 18 130 145 129 146 0.93

4 17 2.9 8.9e+04 -4.1 1.0 6 10 172 176 172 176 0.95

5 17 4.2e-10 1.3e-05 27.4 11.9 1 18 182 199 182 200 0.98

6 17 1.7 5e+04 -3.3 0.4 6 10 230 234 229 234 0.90

7 17 2.6e-10 7.9e-06 28.0 14.7 1 19 240 258 240 258 0.97

8 17 1e-07 0.0032 19.7 13.9 4 19 305 320 298 320 0.87

9 17 1.5 4.4e+04 -3.1 2.0 5 10 349 354 349 354 0.93

10 17 0.0048 1.5e+02 4.8 9.3 1 11 360 370 360 371 0.96

11 17 1.3 4e+04 -3.0 0.8 4 10 375 381 374 382 0.62

12 17 2.1e-10 6.2e-06 28.4 14.5 1 18 387 404 387 405 0.98

13 17 1.2 3.8e+04 -2.9 0.6 6 10 434 438 433 439 0.80

14 17 4.5e-05 1.4 11.3 8.2 9 19 451 461 446 461 0.90

15 17 0.25 7.7e+03 -0.7 0.4 6 11 464 469 464 470 0.94

16 17 2.4e-09 7.3e-05 25.0 16.4 1 19 497 516 497 516 0.97

17 17 0.026 8e+02 2.5 17.6 1 18 526 544 526 545 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.2	6.6e+04	-3.7	3.0	6	10	86	90	82	90	0.61
2	17	0.96	2.9e+04	-2.5	0.3	4	10	116	122	116	122	0.90
3	17	9.9e-06	0.3	13.4	13.7	3	18	130	145	129	146	0.93
4	17	2.9	8.9e+04	-4.1	1.0	6	10	172	176	172	176	0.95
5	17	4.2e-10	1.3e-05	27.4	11.9	1	18	182	199	182	200	0.98
6	17	1.7	5e+04	-3.3	0.4	6	10	230	234	229	234	0.90
7	17	2.6e-10	7.9e-06	28.0	14.7	1	19	240	258	240	258	0.97
8	17	1e-07	0.0032	19.7	13.9	4	19	305	320	298	320	0.87
9	17	1.5	4.4e+04	-3.1	2.0	5	10	349	354	349	354	0.93
10	17	0.0048	1.5e+02	4.8	9.3	1	11	360	370	360	371	0.96
11	17	1.3	4e+04	-3.0	0.8	4	10	375	381	374	382	0.62
12	17	2.1e-10	6.2e-06	28.4	14.5	1	18	387	404	387	405	0.98
13	17	1.2	3.8e+04	-2.9	0.6	6	10	434	438	433	439	0.80
14	17	4.5e-05	1.4	11.3	8.2	9	19	451	461	446	461	0.90
15	17	0.25	7.7e+03	-0.7	0.4	6	11	464	469	464	470	0.94
16	17	2.4e-09	7.3e-05	25.0	16.4	1	19	497	516	497	516	0.97
17	17	0.026	8e+02	2.5	17.6	1	18	526	544	526	545	0.92

Sequence Information

Coding Sequence: ATGCAGCTAGCGCTCGGAAATAGATTTCCTGTAGGAGCTGATCTGTGGCTTCGCTTTGTCGATACTGCTTCTCAAAGAGAGAGACTAGAGGAAATGTTGAACCGTCGTCTTTTAGAATGTCTGGTGTGTTgtgaaaaaattaaacatatagaTAAGATCTGGAATTGCATGCAGTGCTATCACATTTTACATCTAAGCTGTGTGGCTGCATGGGCAAAatcctcaaaagttgaaaatGGTTGGCGTTGTCCAGCATGTCAAAATGTATGTACTGATGTTCCCATGCAGTATGTATGCTACTGTAACAAAACAATAGATCCCAAATATGATCCAAGCACTATACCTCATGGATGTGGAGAAATTTGCTTAAGAAAAGGCCGCACTTGTGAACATAAATGTACTATACTTTGCCATCCAGGTCCATGCCCTGACTGCAATGTAATGGTGGCGAAATCATGTGGCTGTGGATCCACACAACAAGTGGTAAAGTGTAGTACTGATGTAGAAATTGTTTGTGAATCTATTTGCAATAAAACGCTGGACTGCGGCATTCACAAATGTAAATCTGTATGCCATTCTGGAAGTTGTAGTCCATGTGATCAGACCATAATACAAGAATGTTATTGTGGAAAAGTAGGTAGAAAAGTCCCCTGCTCAGCAGAGTTTTGTGGTGATACCCAATATGCATGCGAAGATATTTGCGGAAAGAAATTATCATGTGGGAATCACAGATGTCAAAGAACATGCCACAAGGGTCCCTGTGACACTTGTACTCGAGATGTTAGTATCATAAACACTTGCCCATGTGGAAAGACTCCTCTTCAAAAACCCAGAATATCTTGTTTGGATCCCATTCCTTGTTGTGATAAGATTTGTGGTAAATCACTCAAGTGTGGACAGCCTAGTTTGCCACATAAATGCAGAGAATTATGCCATGAAGGTGCTTGTCCACCCTGTCCTTTAACTACTGTGGTTCGATGTCGCTGTGGCCATATGGACAAGGAGTTACCTTGTGAGAAAGTTACCACAAAAGCTGATGATGCCAGGTGTGAGAAAAAGTGTACAAAGAAACGAATGTGTGGTAAACATAAATGCAACCAACGGTGCTGCATAGAAATTGAACATTTCTGCCCTCTACCTTGCAACCATCAACTGTTCTGTGGTCAGCATAGATGTGAACGCACATGCCACTCAGGCCGATGCCCTCCATGTATGGAAACAAGCTTTGAAGAATTATATTGCGAATGCGGAACTAGCGTACTTTACCCGCCTATTCCATGTGGTACCAAACCTCCAGCTTGTAACAAACCTTGCTCAAGACAACGTCCGTGCGAGCATGATGCAAATCATAGCTGCCACACCGGTCCTTGTCCTCCTTGCACAGTACTTTGTAAAAAGTGGTGTCATGGACATCACGAACAGCGATCAGCCATTCCGTGTCATCAAGAAACCTTCAGTTGTGGCTTGGCTTGCGGAAGAAAAATGCCCTGTGGTAGACACAAATGTAACAAACCATGCCATGAAGGGCCGTGCCCCATGCCATGTAAGCAGCCTTGCAATGTCAGAAGAAGTTTATGTGGTCATCCTTGCGGAAAACCATGCCATGACCCGCCTTGCCCAGAGAGTAGTTGTAAACAGAATGTTCCGGTTACTTGCTTGTGTGGCAATCTAAAAAGTTCCAGGCCTTGCTTAGAAGTGTCGGAGGAGTTTAGAAATATTGAAATGGCCCAACTGAAGGAGAAAATGGGTGATTTGTCCAAAGATCAAACAGTAGATATTTCCGATATCATTAGTAAACCCAAGAAACCTAGCGTTCTTAAGATattgGAATGTACAGAAGAATGCCGTGTTTTAGAAAGAAATCGAAGACTCGCTATTGGTTTACAAATAAGAAATCCAGATTTAAGCCAAAAGTTGACACCAAAATATACAGACTTTATGAGACAGTGGGCAAAAAAGGATCCACATTTTTGTCAAAGAATTCATGACAAATTAACAGAACTTGTCCAGTTAGCTAAACAGAGTAAACAAAAAAGTCGTTCTTATTCTTTTGAGTCTATGAATAGAGACAAACGTCATTTTATCCATGAATATTGTGAACATTTTGGGGTGGAGAGTGCTGCATACGATATGGAACCAAATAGAAATATCGTGGCCACTGCTAATAAGGATAAGTCTTGGTTACCTAGTATGAGTTTATTAGAGGTTATTCAGAGGGAAAATGGTCAACGAAAAGTACCAGGGCCTATGTCTGTTTCGAGTAAAACTGTTGCAAGTAAATCCGAAACTGTGTCTTTAAGATTGCCATGCCAAACACAGAGGCCAAGTTCACATGCTGGAGAATTTATAGATTATTTTGATCCACCagtatag
Protein Sequence: MQLALGNRFPVGADLWLRFVDTASQRERLEEMLNRRLLECLVCCEKIKHIDKIWNCMQCYHILHLSCVAAWAKSSKVENGWRCPACQNVCTDVPMQYVCYCNKTIDPKYDPSTIPHGCGEICLRKGRTCEHKCTILCHPGPCPDCNVMVAKSCGCGSTQQVVKCSTDVEIVCESICNKTLDCGIHKCKSVCHSGSCSPCDQTIIQECYCGKVGRKVPCSAEFCGDTQYACEDICGKKLSCGNHRCQRTCHKGPCDTCTRDVSIINTCPCGKTPLQKPRISCLDPIPCCDKICGKSLKCGQPSLPHKCRELCHEGACPPCPLTTVVRCRCGHMDKELPCEKVTTKADDARCEKKCTKKRMCGKHKCNQRCCIEIEHFCPLPCNHQLFCGQHRCERTCHSGRCPPCMETSFEELYCECGTSVLYPPIPCGTKPPACNKPCSRQRPCEHDANHSCHTGPCPPCTVLCKKWCHGHHEQRSAIPCHQETFSCGLACGRKMPCGRHKCNKPCHEGPCPMPCKQPCNVRRSLCGHPCGKPCHDPPCPESSCKQNVPVTCLCGNLKSSRPCLEVSEEFRNIEMAQLKEKMGDLSKDQTVDISDIISKPKKPSVLKILECTEECRVLERNRRLAIGLQIRNPDLSQKLTPKYTDFMRQWAKKDPHFCQRIHDKLTELVQLAKQSKQKSRSYSFESMNRDKRHFIHEYCEHFGVESAAYDMEPNRNIVATANKDKSWLPSMSLLEVIQRENGQRKVPGPMSVSSKTVASKSETVSLRLPCQTQRPSSHAGEFIDYFDPPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01297051;
90% Identity: -
80% Identity: -