Smel054444.1
Basic Information
- Insect
- Stenurella melanura
- Gene Symbol
- tfip11
- Assembly
- GCA_963583905.1
- Location
- OY757314.1:120453503-120491551[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-96 3.7e-92 311.1 12.8 1 275 214 485 214 485 0.98 2 2 0.073 1.7e+03 0.7 0.1 244 272 499 527 486 542 0.55
Sequence Information
- Coding Sequence
- ATGCCTGCCCACCATGTGGTACTTTTTACTGGTTTAGAAGATGCCCATAAGAAATCTTTGCACCAAACTCCAGATTTAGCAATATATTCTGAAATGACTATAAAAGGAGAAATAAGTGATGGTGAATATGATGATGCCAGAAAAGGAGAATCTAAATGGAAGAAAAATGATACTTTGCAGAAGAAAACAAGATACTATTATCGAAGCGTAGATGATGTTATTGAAAAAGGTAAACGTCCTGGAGCTTATAGAAATTTGGGATCCGCAAGTGAACTCAGTAAAGTCAAGGTAATAGACATGACTGGCCCACAACAGAGAGTTTTGAGTGGATACCATGCTCTTAGTGGCTTAAAAGCGCCGCCTGGTGTGGAACATTTCGAGGATGTTGTGCATAAAAAATGTTCCAACTTTGCACTACCAGAGATCCAGCACAATCTCGATTTATTAGTAGATATGTGTGAACAAGACATCATAAGAATCGATAGAAATACTAGACACAATGAGGATAAAATTATAGCTTTAAAACAAGAAGAAAATTCTCTGAGAGACCTGATTAGAAAAGAAGATATTCTAATAGAAAATTTAAACCAAGTTATGGATATTGTTAATAAACTTATGGATCCTACACAAGGCTACTCCTTGGGACAAATAGGGGACATTTTTAGGAATCTACAGGAAGAACACTATGATGAATACTGCAAATATGAACTAGGAGAATTTGCGCCGGTCTTAATTGATCCACTTTTAACGTCTGCGTTAGCTAATTGGAACCCATTAACACAACCAAATCAGTATACAGATGTTTTTGGACAGTGGCAGGACATCTTGGACAAGCCCAGGCAACGTGGGAATCTAGAAGGTAATAATATGGGAATACAGCCATATGATAGTCTCATATGGCATACTTGGATGCCTGTTATGAGAACTTGTGTTAGTGCATGGGATCCTCACGATTGTGATACATTAATTACTCTGGTAGAGACATGGATACCTCTTCTCCCGCAGTGGATTATTGACAACATTTTTGATCAGCTCATAATGCCAAAGCTACTTAACGAGGTTAATACCTGGAATCCACTTACTGACACAACCCCAATACATATCTGGATTCACCCATGGATTCCTCTTCTAGatacaAGACTTCAGACAACAATATACCCGATTATACAAGAAAAATTAGGAACAGCGTTAAGCAATTGGCATCCGTCGGATAGATCAGCAAAATTAATGCTCCAACCTTGGCAACGGGCTCTTTCACCAGGAGCATTTGTTGCTTTTCTTCTTAAGCACATCGTACCTAAATTGCAAATTTGCATGCAGTCTCTTGTAATAAATCCCCACCAACAGCATCTAgATCCTTGGAACTGGGTTATGGACTGGAATGACATGCTGTCTGTTCCAAATATGACGCTTATCCTGGATAAATTTTTCTTCCCGAGATGGCTCCAAACCCTTGCCATGTGGTTGAATCACAACCCGAACTATTCACAAGTTACAGAGTGGTATTCCGGTTGGAAAAGGATGCTTTCTGAGGAGCTATTAAATCAGACAACTATTAAAGAAAACTTCCACAAAGCTCTCGATATGATGAATAGAGCAATCAACATAGCCCAACAGCCTGGTGCCAAGGAATCTATATCGTACCTAAAAAATATGGAGGCCAACGGTCTCACTAATACTCCAGCTCCACCACCGCCACCTAGAGTTGAAAGTCTGGCAGAGGCGGTAAGAACAGCAGCCAAGATTCCGCAAGGATTCAAGGATCTCGTTACAAAAAGATGTGAAGAAAGAGGCATTTTATTTGTGCCGATTCCAAATAAATATCATGAGGCTAAACAAGTTTATCGAATCGGATCAAATAGTGTACAGTGTTACATAGACAGAAATGTTATTTTTTACTCACAGAACAACTCGACTTGGCTCCCAACCTCACTTAATAAATTGTTAGATATCGCataa
- Protein Sequence
- MPAHHVVLFTGLEDAHKKSLHQTPDLAIYSEMTIKGEISDGEYDDARKGESKWKKNDTLQKKTRYYYRSVDDVIEKGKRPGAYRNLGSASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDVVHKKCSNFALPEIQHNLDLLVDMCEQDIIRIDRNTRHNEDKIIALKQEENSLRDLIRKEDILIENLNQVMDIVNKLMDPTQGYSLGQIGDIFRNLQEEHYDEYCKYELGEFAPVLIDPLLTSALANWNPLTQPNQYTDVFGQWQDILDKPRQRGNLEGNNMGIQPYDSLIWHTWMPVMRTCVSAWDPHDCDTLITLVETWIPLLPQWIIDNIFDQLIMPKLLNEVNTWNPLTDTTPIHIWIHPWIPLLDTRLQTTIYPIIQEKLGTALSNWHPSDRSAKLMLQPWQRALSPGAFVAFLLKHIVPKLQICMQSLVINPHQQHLDPWNWVMDWNDMLSVPNMTLILDKFFFPRWLQTLAMWLNHNPNYSQVTEWYSGWKRMLSEELLNQTTIKENFHKALDMMNRAINIAQQPGAKESISYLKNMEANGLTNTPAPPPPPRVESLAEAVRTAAKIPQGFKDLVTKRCEERGILFVPIPNKYHEAKQVYRIGSNSVQCYIDRNVIFYSQNNSTWLPTSLNKLLDIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00110552;
- 90% Identity
- -
- 80% Identity
- -