Sbip026851.1
Basic Information
- Insect
- Stenoptilia bipunctidactyla
- Gene Symbol
- -
- Assembly
- GCA_944452705.1
- Location
- CALYCB010000933.1:249246-250895[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0013 0.63 11.4 1.7 15 44 79 105 74 105 0.91 2 13 1.2 5.7e+02 1.9 2.3 12 28 106 122 101 123 0.79 3 13 0.0033 1.6 10.1 6.4 2 44 125 164 124 164 0.97 4 13 0.0031 1.5 10.1 0.9 14 44 167 194 165 194 0.91 5 13 0.1 49 5.3 1.0 11 28 194 211 191 224 0.72 6 13 0.15 73 4.8 1.2 10 43 223 253 217 254 0.88 7 13 0.00062 0.3 12.4 0.7 18 43 259 281 255 282 0.94 8 13 0.0012 0.58 11.5 0.1 17 44 296 320 290 320 0.87 9 13 0.00019 0.092 14.1 0.2 14 44 323 350 321 350 0.91 10 13 0.0003 0.15 13.4 0.3 17 43 354 377 351 378 0.91 11 13 0.25 1.3e+02 4.0 1.6 11 28 380 395 377 401 0.82 12 13 0.0041 2 9.8 0.7 6 29 402 425 398 435 0.86 13 13 2 9.8e+02 1.2 2.4 5 28 426 452 425 464 0.85
Sequence Information
- Coding Sequence
- ATGGATTTGAGAATTGAAGAAGTGCAAATAAAACCTGAAATCATAGATGAAGAAAATTTTGATTCCAAATCAGTGACAGTTAAAATAGAGCCTTTTGAGAATGAGTTCACTGACAACTGTACATCAACTGATTCAAAAACTTGTATTTTACCTAATTTCCAAGTCAAAGTAGAAGCACAGAATCTTGTTATAAATGAAGAGTCAAGCAAAAGTCCAGTCTCCAATACAGCATTTAAAAAAGTAGAATGTCCCCAATGTCATAAGCAGTTCAAAAATAACCAAAATTTAAAAAAGCATATAAAATTTGTGCACTCAACGATAGATGAAGAAATTCACTGTGATATTTGCAATTGTGTTTTCAAAAACTCGGCCAAACTATGGAGCCACAAAAGAAATGCCCATGCCAAAGAACAGGTTTGCAGTTGCCCGCAGTGTGACAAAGTGTTCAACACAAAAAAGAAATTGGCTAACCACATTTACTGTTCGCATCCCGAACCAGACCAGAGTGTAAGTTGTGCATTGTGTAACAAAACATTTAAAAGTAAATATAATTATAAAATACATTTAAGACAGGTACATCCTAGTTCAGAAAAGTCAGTGGAATGTAGTATTTGTTACAAATCCTTTAAAACAAATGGGCTGCTGCAGAAACATATAAACTGGTCACATCCTAAGGACGAGATGATATACAAGTGCTTTGAATGTGACAAAGAATACCCGTCACAACTGTGCCTTCGGAAACACATGGACAATGTGCACACTCTTGAAGAAACCAAATGTGAATTGTGTCAGAAAACCTTCAAAGGACTCAAGTTATTACGGCAGCATTTAAACAGAAAACATGGTCTGAAACAACTGGAGTCTGTACCCTATATAATAGGCACTATACCGTGCAATATGTGCGAGCGTAAATTCACATCAAATACTTCTTTATTTTATCACTTAGAACGAGACCATTCAGGGACTCAGAAAAAAACATACTGTCAGATATGTGAGAAAGATTTCTCCAGTGAACTTAATTTTAAGCGTCATCTATTTACTGTACATTCCTTAGATACAGTTGCGTGCCAGATCTGTCAAAAAGTTTTCAAGTCCACAGATAACCTGGAGAGGCACATCAGAGTGACTCATGCACCGCCGGAAGCTGCAGCCACTTGTGACATTTGTCAGAAAGTCTTCAAATGTAAGATGCATTTACGAATACACGTATCTGCTGTGCATACAGAGAAAGGGCCAGCAAAGTGTGATATATGCGAAAAGGAATTCTCTTCTAGAAAATACATGCTAAAACATAAGAAAACCCATACAGTAGTCCGTCAATACTCATGTGATATTTGTTTTAAAACTTACAAGTCTTTGGGTGACGTCCGTAAACATGCTAAAAGAGTTCACTTAAGCTCGTTAGAAAAATGTCAACTTTGTAAAGAGTTTTTTGATACTCCTGGAGAACTCTGTCAACACATTGTTGAAATACACGGAAACCTGCTACCTGGAACTGTTGTACCGAAGTTTTGTATAACCTGTACTAAGCCTATTGGCACCGGCGCGGAGAGTAACTCATGTACAGAATGTCAGAAAATAACTCCGGAGGATATTACTGTTGAAGTCGATGTCAAAATTGAACCCGAACCAGAGAGTATTCTAAGCTGA
- Protein Sequence
- MDLRIEEVQIKPEIIDEENFDSKSVTVKIEPFENEFTDNCTSTDSKTCILPNFQVKVEAQNLVINEESSKSPVSNTAFKKVECPQCHKQFKNNQNLKKHIKFVHSTIDEEIHCDICNCVFKNSAKLWSHKRNAHAKEQVCSCPQCDKVFNTKKKLANHIYCSHPEPDQSVSCALCNKTFKSKYNYKIHLRQVHPSSEKSVECSICYKSFKTNGLLQKHINWSHPKDEMIYKCFECDKEYPSQLCLRKHMDNVHTLEETKCELCQKTFKGLKLLRQHLNRKHGLKQLESVPYIIGTIPCNMCERKFTSNTSLFYHLERDHSGTQKKTYCQICEKDFSSELNFKRHLFTVHSLDTVACQICQKVFKSTDNLERHIRVTHAPPEAAATCDICQKVFKCKMHLRIHVSAVHTEKGPAKCDICEKEFSSRKYMLKHKKTHTVVRQYSCDICFKTYKSLGDVRKHAKRVHLSSLEKCQLCKEFFDTPGELCQHIVEIHGNLLPGTVVPKFCITCTKPIGTGAESNSCTECQKITPEDITVEVDVKIEPEPESILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01368683; iTF_01368377;
- 90% Identity
- iTF_01368683; iTF_01368377;
- 80% Identity
- iTF_01368683; iTF_01368377;