Basic Information

Insect: Stenodera caucasica
Gene Symbol: Hr39
Assembly: GCA_037414795.1
Location: JAZBGZ010000288.1:54299-57403[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2 1.4e+04 -15.5 17.6 125 125 105 105 3 245 0.45

2 5 2 1.4e+04 -7.9 14.6 76 165 179 276 144 302 0.44

3 5 2 1.4e+04 -7.5 19.9 49 177 233 398 216 404 0.53

4 5 1.6e-13 1.2e-09 37.8 0.1 1 121 467 586 467 609 0.74

5 5 1.4e-72 9.9e-69 232.4 0.1 205 408 626 824 606 824 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2	1.4e+04	-15.5	17.6	125	125	105	105	3	245	0.45
2	5	2	1.4e+04	-7.9	14.6	76	165	179	276	144	302	0.44
3	5	2	1.4e+04	-7.5	19.9	49	177	233	398	216	404	0.53
4	5	1.6e-13	1.2e-09	37.8	0.1	1	121	467	586	467	609	0.74
5	5	1.4e-72	9.9e-69	232.4	0.1	205	408	626	824	606	824	0.97

Sequence Information

Coding Sequence: ATGGCCGCAGATATGAGGTCACCTAATGTAACTGTCACCCCAATTAATATGGAATCATCAccatatcatcatcatcataatcatcatcatcatcatcatcatcatcatgaacaacaacaacaacaacaacatgattTATCAAATCATGAACCACAACGTACTAGAAGTGCTCCACATCCTAGTTTATTAACAaatggtggtgatggtggtggtggtggtggtggtggtggtggtgttgatTCACTAGATAATTCAGCAGATGCTGAAGTTGCccaaattgattttcaatgtGCTGTTAATTTACGACATAAAAAGAAACGTGATAGTAATAGTAATGTTGATACTAGTGATGTTATACCAAGACCTATGTCATGGGAAGGTGAATTATCTGATCATGAACGTGATATGTGTattgatgacgatgatgatgatcacaATCATGGATCTCAGgtACCTGAGAATTTATCACTGTcacaatcgaaattgaataatgCAACAACGAATAGCTTGAATTCAAAGGATAGTCCAATACTAAGATTGAAACAATCATCACAACCACCAACAATGAATAATTACTCATTACATAGTACCCCAAGTAATTCACCATTATTAAGTCAACGACATCCAATCACTGGTATAccaattttaacaacaaatcataataaagatattctacaacaacaacaacaacaacaacaacaacaacaacaacaacaacataataataataaaatattaaatataccCCCAACACCGAGCCCAGATTCTGCTATACATTCAATTTATAGTGTTTATAGTTCACCAAATCAAAGTCCATTACAACAAAGACATATAACATTAACACCAAATTTAAGTCGTAATAATAGTGATGCATCACATTCAAGTTGTTGTAGTTATTCAAGTGTTTCAGTTTCTGTATCACCAACACAACAATTTTCACCAACACACAGCCCTATTCAGGGCCGCCATATGCACAATATCCATAACAGCCCTTTACATCACAATGTATTATATCGAAGTTTACAAGAAGATCAAACAATTCAGTATAATAATCTTGaacataatgataatttagatgaaattgaagataagACTGGTTTAATTCATACATCATCAACAtctatatcatcatcatcatcatcactaccAGCCCAGCCTGGTATATCAcgacaacaattaataaatagtcCATGTCCTATATGTGGCGATAAAATATCAGGTTTTCATTATGGTATATTTAGTTGTGAATCATGTAAAGGTTTCTTCAAACGTACAGTACAAAATCGTAAAAATTATGTATGTTTACGTGGTGCTCAATGTCCAGTTACTGTAACAACACGTAAAAAATGTCCAGCTTGTCGTTTTGATAAATGTCTACAATGCGGTATGAAACTTGAAGCTATAAGAGAAGATAGAACTAGAGGTGGTAGATCAACTTATCAATGTTCATATTCTTTGCCGCCatcattaacaacaaatcataATGAATTACGTGCTAGTACAACTGATTTACGACaaaatatattgaatgatCCAAATAatcctcatcatcatcaacatcatcaccatcatcatcatggtAGTTTAACTGTTAAATTAGAACCTGGTGATTCTTCTACTAGTAGTAGTTTATCATCAATACATCATAAACGTAATAGTGGAACAACAATGCCAGGTTCAAAAGGTGTCCCAGCATTATTGCaaGAAATAATGGATGTGGAGCATCTGTGGCATTATAATGAGGTTGAATTGAATAAGTTAAGTACAGAAGGACATTTAGGTAAAGAAGtaggaacaacaacaactagtGGAACCGttcataatttatcaaatcatcCATTATTAGTTGGTACAGCATTGGCCGGTTCAGCAGATACAAATCCTGATTTTGTTGCCAATTTATGTAATATTGCCGATCGtcgattatataaaattgttaaatggTGTAAAAGTTTACCATTATTTAAAAACATATcgATTGACGatcaaatttgtttattgatcaattcctggtgtgaattattattgttctctTGTTGTTTCCGTTCAATGTCAACACCTGGCGAAATTCGTGTATCGTTAGGTAAAAGTATAACTTTAAATCAAGCCATTGATATGGGAATGCAAGCATGTATTGAACGTATGTTGAATTTTACGGAACAATTAAGACGTTTAAGAGTTGATCAATATGAATATGTTGCTATGAaagttattgttttattaacatcagATACATCAGGATTACGTGAAGCTGAAAAAGTACGTGCATCACAAGAGAAAGCATTAAAAGCATTACAAGATTATACATTGACTCATTATCCGGATAGTCCagcgaaatttggtgaattacTATTACGTATACCCGAATTACAACGTACTTGccaaGTTGGAAAAGAAATGTtgacaattaaatcaaaagaCGGCGATGGTCCTAGTTTTAATCTATTAATGGAACTTCTTCGTGGAGATCATTAA
Protein Sequence: MAADMRSPNVTVTPINMESSPYHHHHNHHHHHHHHHEQQQQQQHDLSNHEPQRTRSAPHPSLLTNGGDGGGGGGGGGGVDSLDNSADAEVAQIDFQCAVNLRHKKKRDSNSNVDTSDVIPRPMSWEGELSDHERDMCIDDDDDDHNHGSQVPENLSLSQSKLNNATTNSLNSKDSPILRLKQSSQPPTMNNYSLHSTPSNSPLLSQRHPITGIPILTTNHNKDILQQQQQQQQQQQQQQHNNNKILNIPPTPSPDSAIHSIYSVYSSPNQSPLQQRHITLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMHNIHNSPLHHNVLYRSLQEDQTIQYNNLEHNDNLDEIEDKTGLIHTSSTSISSSSSSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAQCPVTVTTRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTTNHNELRASTTDLRQNILNDPNNPHHHQHHHHHHHGSLTVKLEPGDSSTSSSLSSIHHKRNSGTTMPGSKGVPALLQEIMDVEHLWHYNEVELNKLSTEGHLGKEVGTTTTSGTVHNLSNHPLLVGTALAGSADTNPDFVANLCNIADRRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLNQAIDMGMQACIERMLNFTEQLRRLRVDQYEYVAMKVIVLLTSDTSGLREAEKVRASQEKALKALQDYTLTHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01566282;
90% Identity: iTF_01366406;
80% Identity: iTF_01366406;