Scau008418.1
Basic Information
- Insect
- Stenodera caucasica
- Gene Symbol
- dnajc2
- Assembly
- GCA_037414795.1
- Location
- JAZBGZ010001291.1:78-1934[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.4 6.5e+03 -2.9 0.6 6 14 294 302 293 304 0.59 2 4 8.4 5.8e+03 -2.8 0.3 7 18 323 334 322 335 0.89 3 4 0.0015 1 9.2 0.0 3 31 434 466 433 475 0.86 4 4 1.2e-12 8e-10 38.4 0.4 3 44 555 600 555 602 0.91
Sequence Information
- Coding Sequence
- ATGGGGGAAGTTAAgttgatgaaaaataataatagttgtacAACAGTTGCTGTACGTTATTATTTCACGTATGAGTCAGATAGTGGTTTGAAATTTGTACAACATACAGTCTGTGAATTACCAGTAGACTTAGAAAATGGGGAAGATTTGAAAcctgaaaatattgattatgaaGATGATGTAGAATATTTACGTTCATTAGATCCAAAAGAATGGAAATCGCAGGATCATTACAAAGTTTTGGGCATACCAAACTTACGCTATAAAGCCAcagatgaaattattaaaacagcCTATCGTAAAAAAGTATTGAAACATCATCCAGACAAGCGAAAAGCTTTAGGTGAAGAAATCAAACcagatgatgattattttacaTGTATAACAATGGCTTATGAAACATTAGGTAATCCAATTAAAAGACGCTCATATGATAGTGTTGATCctgaatttgataataatcttcCAAGTGGACAAGAGATCAAAAAAGATTTTTATgaaacattcaattattattttgatttaaattcacGTTGGTCAGAAAGAACAAATGTACCAAAATTAGgtgatgaaaattcaacacgtcaaaaagttgaaaaattctatacaTTTTGGTATGATTTCAAATCATGGCGTGAATATTCTtatgaagatgaagaagataaagaaaaatgTCAAGATCGTGATGAGCGTCGTtatgttgataaattaaataaagctGAACGTTTACGTAAAAAGAAAGAAGAAATGTCACGCATTCgtaatttagttgatttagCTTATAATAATGATCCAAGAATAGCAAAATTTAAACAAGatgataaagagaaaaaattagCAGCGAAACGTGCTAAACAAAGTCTACAACAAGctaaaaaagaagaagaagaacgtATATTACGAGAAGCACAATTAGCTAAAGAACAAGCTGAGGCGGCTGAACGTGCAAAAATTGAAGCGAAACGACAAGAACGTGAATTATTGAAGCGTGCATTGAAGAAAGAACGTAAAATATTACGTGATTATTGTAAagcaaataattatttttcagaaaacTCTGATGAAAGTTTAAAACATCTGACCGGGCTAGAAACGATATgcgaattatttaatttaaatgaattagaaGAGTtaaataagaatttgaaaacTAATGGTAAATCTGTATTTATTAAAGCATTAAAAGACACTGAACAGAGAATACAGAAAGAGAAAGAAGCTGTGATTGAAGCtgctaaaaaacaaaaatccaacaataataatgataacgaCAAAGAATTTATTGTTCAAGCAATACCTGATTGGAACGAAGataatatacaattattaGTGAAAGCTGTTAATTTATTTCCAGCTGGTACAAACCAACGTTGGGATGTTGTTGccaatttcatcaatcaaCATGGTACTTTTAAAACGAATGTACGATTTAATTCTAAGTTGGTATTAGCAAAAGCAAAAGATTTACAAAATACGGATTTTACAAAGAATAATTTGAAGGATGTGGCCAATAAACAAgcatttgataattttaaaaaggATAAACGTAatgttttgaatattgatgaatcAAATATATCAACGAAAttagataatttgaataatatcaacaaaagtaattgtaataatagtagtggtgataataaaatcattaaagaTATACCATGGACAAAAActgaacaacaattattagaacaagCTTTAAAAACTTATCCATCAACAACAGCAGAACGTTGGGATCGTATAGCTGAATGTATACCAAATCGTAATAAAAAAGAATGTATTAAACGTTATAAAGAATTAGTTGAGACTGTTAAAGCAAAAAAAGCAGCACAAGCTGCTGTACTTggtaaataa
- Protein Sequence
- MGEVKLMKNNNSCTTVAVRYYFTYESDSGLKFVQHTVCELPVDLENGEDLKPENIDYEDDVEYLRSLDPKEWKSQDHYKVLGIPNLRYKATDEIIKTAYRKKVLKHHPDKRKALGEEIKPDDDYFTCITMAYETLGNPIKRRSYDSVDPEFDNNLPSGQEIKKDFYETFNYYFDLNSRWSERTNVPKLGDENSTRQKVEKFYTFWYDFKSWREYSYEDEEDKEKCQDRDERRYVDKLNKAERLRKKKEEMSRIRNLVDLAYNNDPRIAKFKQDDKEKKLAAKRAKQSLQQAKKEEEERILREAQLAKEQAEAAERAKIEAKRQERELLKRALKKERKILRDYCKANNYFSENSDESLKHLTGLETICELFNLNELEELNKNLKTNGKSVFIKALKDTEQRIQKEKEAVIEAAKKQKSNNNNDNDKEFIVQAIPDWNEDNIQLLVKAVNLFPAGTNQRWDVVANFINQHGTFKTNVRFNSKLVLAKAKDLQNTDFTKNNLKDVANKQAFDNFKKDKRNVLNIDESNISTKLDNLNNINKSNCNNSSGDNKIIKDIPWTKTEQQLLEQALKTYPSTTAERWDRIAECIPNRNKKECIKRYKELVETVKAKKAAQAAVLGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00929505;
- 90% Identity
- -
- 80% Identity
- -