Ltri000132.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- dnajc2
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000009.1:14168-16048[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.5 7.1e+03 -3.1 0.5 6 15 297 306 296 308 0.59 2 4 7.7 5.8e+03 -2.8 0.3 7 18 326 337 325 338 0.89 3 4 0.0019 1.4 8.7 0.0 3 31 449 481 448 488 0.85 4 4 1.7e-13 1.3e-10 40.9 0.1 3 44 563 608 561 610 0.90
Sequence Information
- Coding Sequence
- ATGGGTGAagtgaaaatgttgaaaaacaataaaattaataattgtacaacaataGCTGTAcgttattatttcaattatgaaACAGATAATGGTTTACAATTTGTACAACATACAGTTAGTGAATTACCGGtagataatgaaattattgttgatgaattaaaacCGGATAGTATTGATTATGAAGATGATGTAGAATATTTACGTTCATTAGATCCAAAAGAATGGAAATCGCAAGATCATTATAAAGTTTTAGGTATATCGAATTTACGTTATCGTGCAActgatgaaattattaaaacagcATATCGTAAAAAAGTATTAAAACATCATCCAGATAAAAGGAAAGCATTAGGTGAAGAAATCAAACCGGATGATGATTATTTCACATGTATAACAATGGCATATGAAATATTAGGTAATCCAATAAAAAGACGTTCATATGATAGTGTTGATCcagaatttgataataatctacCTAATGgacaagaaattaaaaaagatttctataaaacatttaattattattttaatttaaattcacgTTGGtcagaaaaattaaatgtaccAAAATTAGGTGATCAACATTCAACACGTCAACAAGTCGAAGAATTCTATACATTTTGGTATGATTTTAAATCATGGCGTGAATATTCttatgaagatgaagaagataAAGAGAAATGTCAAGATCGTGATGAACGTCgttatgttgataaattaaataaagctgaacgtttacgtaaaaaaaaagaagaaatgtTACGTATACGTAATTTAGTTGATTTATCATATAATAATGATCCAAGAATAGCGAAATTCAAACAAGATGATAAAGAAAGGAAATTAGCAGCAAAACGTGctaaacaaacattacaacaagctaaaaaagatgaagaagaacGTTTATTACGTGAAgcacaattaattaaagaacaaACTGAAGCAATGGAACGTGCTAAAATTGAAGCTAAACGACAAGAacgtgaattattaaaacgtgCATTGAAAAAAGAACGGAAATTATTAAgggatttttgtaaaattaataattattttgctGAAAATGCTGatgaaaatctaaaatatatGACTGGTGTAGAAACTATAtgtgaattgtttaatttgaatgaattagaagaattgaataagaatttgaaaaataatggCAAATCTGTACTGGTTAAAGCATTAAAAGAAACAGAACAACGAATACAGAAGGAGAAGGATGCTGTAATTGAAGCTGCCAAACAGAAACctactactaataataatacaaataataatagtaataattgcaataatagtaataataatagtagtaataatagtaaacaaGCAACAGCTGATTGGAATGAGGATAATATCCAATTATTGGTGAAAGCTGTGAATTTATTTCCAGCTGGTACAAATCAACGTTGGGAAGTTGTTGCGAATTTCATCAATCAACATGGTACATTCAAAACAAATGCACGTTTTAATGCAAAATCTGTATTAGCAAAAGCAAAAGATCTACAAAATactgattttacaaaaaataatttaaaagaagtAGCAAATAAACAagcatttgataattttagaaaagatAAACgtaatgttttaaatattgatgaaacaaatatatcaacaaaattagatgatataaataatattacaaataataataataataataataaagatacaCCATGGACAACAActgaacaacaattattagagCAAGCATTAAAAACGTatccatcatcaacattagaACGTTGGGATCGTATAGCTGAATGTATACCAAATCGTAGTAAAAAAGAATGTATGAGACGTTATAAAGAATTAGTTGAAACTGTTAAAGCAAAGAAAGCAGCACAAGCTGCTGTTGTTgctaaataa
- Protein Sequence
- MGEVKMLKNNKINNCTTIAVRYYFNYETDNGLQFVQHTVSELPVDNEIIVDELKPDSIDYEDDVEYLRSLDPKEWKSQDHYKVLGISNLRYRATDEIIKTAYRKKVLKHHPDKRKALGEEIKPDDDYFTCITMAYEILGNPIKRRSYDSVDPEFDNNLPNGQEIKKDFYKTFNYYFNLNSRWSEKLNVPKLGDQHSTRQQVEEFYTFWYDFKSWREYSYEDEEDKEKCQDRDERRYVDKLNKAERLRKKKEEMLRIRNLVDLSYNNDPRIAKFKQDDKERKLAAKRAKQTLQQAKKDEEERLLREAQLIKEQTEAMERAKIEAKRQERELLKRALKKERKLLRDFCKINNYFAENADENLKYMTGVETICELFNLNELEELNKNLKNNGKSVLVKALKETEQRIQKEKDAVIEAAKQKPTTNNNTNNNSNNCNNSNNNSSNNSKQATADWNEDNIQLLVKAVNLFPAGTNQRWEVVANFINQHGTFKTNARFNAKSVLAKAKDLQNTDFTKNNLKEVANKQAFDNFRKDKRNVLNIDETNISTKLDDINNITNNNNNNNKDTPWTTTEQQLLEQALKTYPSSTLERWDRIAECIPNRSKKECMRRYKELVETVKAKKAAQAAVVAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01366262; iTF_01566173; iTF_01022149; iTF_00814334; iTF_00813649;
- 90% Identity
- -
- 80% Identity
- -