Scau003708.1
Basic Information
- Insect
- Stenodera caucasica
- Gene Symbol
- Rel
- Assembly
- GCA_037414795.1
- Location
- JAZBGZ010000307.1:13763-18730[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-10 4e-06 26.6 0.1 1 35 58 92 58 96 0.94 2 2 4.2e-17 2e-13 50.3 0.3 72 167 93 205 92 207 0.94
Sequence Information
- Coding Sequence
- ATGAGTAATTATCTCAATATTATGACACCACCTTCGAGTAGTGAAGATTCACCCCAATATTACCATGTTAGCAATTCACCAAATTGTTATTCATCACCTGATTCAAgtacgaattttattataacaacacCAACTGAAATCGACCCAGGAATATTAACTAAtaAGCcgtatttgaaaattctggAACAACCAATTGGTAAATTCCGTTTCCGATATAGATCAGAAATGACTGGTACACATGGTAGTCTTTGCGGTGAGAATTCTGATCGACATCAAGGTAAAGAAGAAGTTGATGATCCACATGATGTTGAAGTGTCACCACAACAAAGCATGAGATATTCATTTCATAATATGGGAATTATACATACGGCTAAAAAgaatattgtaattgaattggaacggaaaaaaatgaaattaaaacgTGAAGAAATTGCTAGAATTGAAGGGCATACTAgggatttgaatttgaaagaaatttcagagATTAAAAGATTGGCTGAAGATGAAAGCAAATCAATTAATCTGAATGTTGTATGCTTACGATTTGATGCATTTTATAAAGATAATGGTATATTACGTCCTATTTGTCCCCCAGTTTATACTCATggtataaaaaatttaaAGAGTGCATTAACAGgtgaattaaaaattgtacGAATGGACCATTGTAGTAGTCCGGCAAAAGGTGGACgtgagatttttattttagttgaaagAGTTACAAAAAaaaatattaaaatcagattctttgaaattgatgatgaggAAAATGAAATCTGGGAAAACTTTGGTAAATTTACTGATCTCGATGTTCATCATCAATATGCTATTGTTTTTagAACACCAGCATATAAAGTGTTGGAATTAACAAAACCTGTAACTGTTTTTATACAATTGGTACGGCCATCAGATGGTGCAACAAGTGAACCAAAAGAATTTCGTTATATACCATCATCTGATTCATATAGACCAGGTGCAAAACGTTCAAGATCAGATTATAGTAGCAGTTATGATAGTAGTTCAGTATCAATAAATAGTGATGAATTACCTGTAACTGtcacaaatttatttacaaaaacaaataatccaGCAATGGAAGTATCAAATCAACcaaatgaattaaatatgaatattgaTTATCAAATTAGTAGTGCTGAATTACAATTAGCAATGACAAATATTAATTCAgatgaatttcatcaattatttagtGAATTTGGTGAAGAATATTTAGCATGTAATAATGCTAATGTTTTTCAATCTGATATGGGAACATCATCAGTTGCTGTAGATGCTGCAACTGTTTTTGGTAAAAGAACATATGAAAAACGACGTTCCCAATTAATtgaaaaaactgATTTGAAGAAACCAACAACATCAGATGAAATTAAACATGCAAAAGATGTAATTGAAGATTTAcgtaatttaataaaaacaaaaccgCCAAATGAACGTGTTATACAAATGTTGCAACATTATTTGAAAGCACCAATTAAAAACaatGCTCTTCATACATTGATTAAACGTAATGATATCGATaaagtattatttttagtaaattTGATTTACATATGGAAAcagtataatttattgaatataaaaaatagtGATGGTGAGACACCATTACATATATCAacatattgtaaaaataaaacgattctTGATcgtttaatcaaaaataaagctGATTTATCGATTGGtgatcaacaattgaatactGCATTGCATATAGCCGTTGAAGTTAATGCACAAGTTGATATACTGGAAACAATATTAATGGCTGACAAAGTTTTAGAGTTTATCGACAATGAAAATTGCGaCGGTAATACACCTTTGAATCTAgctattgaaaataacaatctAAAAGCTGTTAAAATGTTATTAATGCGTGGAGCTGATGTTAATAAGACACATAAAAAAAGTGGTTTTACACCGTTACGTTTCgctattgaaaaacaatatatcgatattgttaaatatattttgGAATCACCTGGTACAAATCCGCTAATTGAAGATTTCCAAGGTAAAAGTGCGTTATATGCAGCAATGAAAAAAGACAACgaacaattatcatcattagtTGCTGAATTTATGAAAACTCATAATTATGCtgatataatcaaaaatgaaattgaagataCAATAGAAGATgaggaaattgaagaaaaatattcaataaaactagaacaaatatcaattgaaGATTTACGTGATATGTATAGTAATATAACAACATTCACACAAGAATGTTTAGATGAAATTGCGAAAATCTTGGATAATTCTGGTACATGGGAAAATCTTGCTGATTTATTAGATTTAGGACATTTGATGCGTTCTGGTGTATGTGATTCGTCCGACAGTCCTACCAAAGTCTTATTGAAATTTGCTACAGAAaataatggtgatacaattttacaaattcgAGACTTTCTGGAAAATTTGGATGAACTTCAAGcagttgaaatcattgataatatgGTTAAATCACAATTCATTTGA
- Protein Sequence
- MSNYLNIMTPPSSSEDSPQYYHVSNSPNCYSSPDSSTNFIITTPTEIDPGILTNKPYLKILEQPIGKFRFRYRSEMTGTHGSLCGENSDRHQGKEEVDDPHDVEVSPQQSMRYSFHNMGIIHTAKKNIVIELERKKMKLKREEIARIEGHTRDLNLKEISEIKRLAEDESKSINLNVVCLRFDAFYKDNGILRPICPPVYTHGIKNLKSALTGELKIVRMDHCSSPAKGGREIFILVERVTKKNIKIRFFEIDDEENEIWENFGKFTDLDVHHQYAIVFRTPAYKVLELTKPVTVFIQLVRPSDGATSEPKEFRYIPSSDSYRPGAKRSRSDYSSSYDSSSVSINSDELPVTVTNLFTKTNNPAMEVSNQPNELNMNIDYQISSAELQLAMTNINSDEFHQLFSEFGEEYLACNNANVFQSDMGTSSVAVDAATVFGKRTYEKRRSQLIEKTDLKKPTTSDEIKHAKDVIEDLRNLIKTKPPNERVIQMLQHYLKAPIKNNALHTLIKRNDIDKVLFLVNLIYIWKQYNLLNIKNSDGETPLHISTYCKNKTILDRLIKNKADLSIGDQQLNTALHIAVEVNAQVDILETILMADKVLEFIDNENCDGNTPLNLAIENNNLKAVKMLLMRGADVNKTHKKSGFTPLRFAIEKQYIDIVKYILESPGTNPLIEDFQGKSALYAAMKKDNEQLSSLVAEFMKTHNYADIIKNEIEDTIEDEEIEEKYSIKLEQISIEDLRDMYSNITTFTQECLDEIAKILDNSGTWENLADLLDLGHLMRSGVCDSSDSPTKVLLKFATENNGDTILQIRDFLENLDELQAVEIIDNMVKSQFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -