Scau002902.1
Basic Information
- Insect
- Stenodera caucasica
- Gene Symbol
- TSC22D1
- Assembly
- GCA_037414795.1
- Location
- JAZBGZ010000206.1:31481-35066[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3 1.4e+04 -6.2 4.4 31 56 436 460 434 463 0.55 2 2 6.9e-27 3.3e-23 81.3 2.6 1 47 550 596 550 600 0.96
Sequence Information
- Coding Sequence
- ATGCTACCAAGTAATGTGGATCCCCGTAGGGCTGATCGGATTGTTAGACAGAAACCACAAATGAATTCCAATGGACAAGGTGAAGATCTCACCCCAGATTATATGAATATTCTTGGTCAACGTGCGACCACGGCAAATGCAAGTGCAGAAACCACATCCAGTGATAAACAAATGGTAGATGGTAATATtggtaatggtaataataatattggtgaAGAAGTTGATAGTACTACAAACGTGATACCCACCAGTCCTCAATATGGTGTTGCTATAATACCAAATCAAGCTACAACATCAACAgccccaacaacaacaacaacaacaacaacaaatgatataATAACAGAAACTGTAACAATATCAACCGATACAATAACAGATACACAAGTAAAACAAGTAACAGATGATGGAAAAGATATACATTCAACACCAAGTCGTAATGATCGTTTTAAAGTTGTTAAAATAGCTAGTTTGGAACCGTTTAAACGAGGCCGTTGGAAATGTATGGATTATGTTGATGAAGCACCACCAGCAGCtgcattacaacaacaacaacaacaaaataaaattactcaATCAGGTGGTAATATGCCTATAACAAGTGGTGTTTATTTACAAACCCAAAGtttaccacaacaacaaatccaacaaATGTTATTACAAAGTGGTTATACAAATGGtacacaattttatcaaaatgtaCCAACACAAATGATACCACAAACACAATATTTTTATCCACCTGGtacaaatttacaaacaacacaaacatTACCACAACAATTAATAAGTACAACTGGTActagtagtggtggtggtggtggtggtagtggtgTAACAAATAGTAATGTACCaacacaatttataaatacaacacAACCATATTTTACAACTGGTGTTGTACCAAATTCTGTTGGTTATCAAATACAAACTAATTATCCAAATGTACAATATGTACCAGCTaatataatacaacaacaaaatcaaaatagtgCATTTGTACCAACATCACAAACTAATGTACAATTACCaacgaattttcaacaaagCCAAACTTATGCTGGACAAGCCAAtgttaatcaacaacaaccaatGGTAAATGGGCATGCTTATCCAACACaaaatgaacaacaacaacaacaacaaaatacagCAAGTCTACCAGCTCAAACAGcgaaaaatgtaattttaaGTAATATCCAACAACCTATTGTGAGTCAATCACAAATTACACAAccaaatttacaaacaaatcaaattccgGTTGTTCAAAATAGTTCACAACCTCAGACAGTTCCtgtaatacaacaacaacaacaacaaaaccaagtatttcaacaacagcaaacaacaaattttcaacaagttcctcaacaacaacaacaacaagtgaTAACTGGTACTTCCCAACAAATAGCACCAACACAAAATTATGAACAACAGAATCAAGCAAATAATGTTTATACGAATCCCCAATTCGATATGAATGTCAATAGTTTAACAGCATTAGAAAATGTTGAACAATCTGTAGAaaatattagtaataataataatgaaacaaatacgGTTGATAGTATTGAAAATACAGATGATCCATCTAAAACAAATCCAGTTGTTAATgctattgataataaaattgaacaagcTATGGATTTAGTTAAAAGTCATTTAATGTATACAGTACGTGAAGAAGTTGAAGtattaaaagagaaaattgcTGAATTAATGGAACGTATACAACAATTAGAAacggaaaataattttttacgaTCACAAATACCAAAAAGTCAAACAATATTACCGCCATCTATTAGCGGTAGTTCAATACAACCACAACAGCAatcttcaacatcatcatcatcatcagcatcaTCATCGACTACAGCAGctgtaacaataacaacatcaacaacaacaacaacaaatgctCCAACTAATTTACCAACAGAAACTAATCCACCACAatag
- Protein Sequence
- MLPSNVDPRRADRIVRQKPQMNSNGQGEDLTPDYMNILGQRATTANASAETTSSDKQMVDGNIGNGNNNIGEEVDSTTNVIPTSPQYGVAIIPNQATTSTAPTTTTTTTTNDIITETVTISTDTITDTQVKQVTDDGKDIHSTPSRNDRFKVVKIASLEPFKRGRWKCMDYVDEAPPAAALQQQQQQNKITQSGGNMPITSGVYLQTQSLPQQQIQQMLLQSGYTNGTQFYQNVPTQMIPQTQYFYPPGTNLQTTQTLPQQLISTTGTSSGGGGGGSGVTNSNVPTQFINTTQPYFTTGVVPNSVGYQIQTNYPNVQYVPANIIQQQNQNSAFVPTSQTNVQLPTNFQQSQTYAGQANVNQQQPMVNGHAYPTQNEQQQQQQNTASLPAQTAKNVILSNIQQPIVSQSQITQPNLQTNQIPVVQNSSQPQTVPVIQQQQQQNQVFQQQQTTNFQQVPQQQQQQVITGTSQQIAPTQNYEQQNQANNVYTNPQFDMNVNSLTALENVEQSVENISNNNNETNTVDSIENTDDPSKTNPVVNAIDNKIEQAMDLVKSHLMYTVREEVEVLKEKIAELMERIQQLETENNFLRSQIPKSQTILPPSISGSSIQPQQQSSTSSSSSASSSTTAAVTITTSTTTTTNAPTNLPTETNPPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -