Basic Information

Insect: Stenodema calcarata
Gene Symbol: L
Assembly: GCA_963920205.1
Location: OY986048.1:2939772-2984687[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 8.3e-06 0.0014 20.2 1.0 1 23 62 84 62 84 0.98

2 19 0.16 27 6.7 6.5 1 23 90 112 90 112 0.97

3 19 2e-06 0.00034 22.1 2.0 1 23 118 140 118 140 0.99

4 19 3.3e-05 0.0056 18.3 0.2 1 23 146 168 146 168 0.98

5 19 0.0003 0.051 15.3 0.1 1 23 183 206 183 206 0.97

6 19 0.0078 1.3 10.9 0.0 1 23 273 296 273 296 0.93

7 19 0.03 5 9.0 1.4 1 20 308 327 308 331 0.89

8 19 0.29 48 5.9 0.3 3 23 395 415 394 415 0.98

9 19 0.0072 1.2 11.0 0.1 3 23 437 457 436 457 0.93

10 19 0.33 55 5.7 0.1 3 23 467 488 465 488 0.92

11 19 0.21 36 6.3 0.2 1 23 493 516 493 516 0.92

12 19 0.0043 0.72 11.7 2.5 1 23 592 615 592 615 0.96

13 19 2.2 3.6e+02 3.2 0.3 3 23 698 720 697 721 0.86

14 19 0.0086 1.4 10.7 2.7 2 21 733 752 732 753 0.93

15 19 0.0029 0.49 12.2 2.4 2 23 890 912 889 912 0.95

16 19 0.021 3.4 9.5 1.1 1 19 916 934 916 936 0.96

17 19 0.35 59 5.6 0.1 1 23 944 966 944 966 0.96

18 19 0.0021 0.35 12.6 0.0 1 23 974 996 974 996 0.98

19 19 0.11 18 7.2 1.8 1 23 1003 1025 1003 1025 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	8.3e-06	0.0014	20.2	1.0	1	23	62	84	62	84	0.98
2	19	0.16	27	6.7	6.5	1	23	90	112	90	112	0.97
3	19	2e-06	0.00034	22.1	2.0	1	23	118	140	118	140	0.99
4	19	3.3e-05	0.0056	18.3	0.2	1	23	146	168	146	168	0.98
5	19	0.0003	0.051	15.3	0.1	1	23	183	206	183	206	0.97
6	19	0.0078	1.3	10.9	0.0	1	23	273	296	273	296	0.93
7	19	0.03	5	9.0	1.4	1	20	308	327	308	331	0.89
8	19	0.29	48	5.9	0.3	3	23	395	415	394	415	0.98
9	19	0.0072	1.2	11.0	0.1	3	23	437	457	436	457	0.93
10	19	0.33	55	5.7	0.1	3	23	467	488	465	488	0.92
11	19	0.21	36	6.3	0.2	1	23	493	516	493	516	0.92
12	19	0.0043	0.72	11.7	2.5	1	23	592	615	592	615	0.96
13	19	2.2	3.6e+02	3.2	0.3	3	23	698	720	697	721	0.86
14	19	0.0086	1.4	10.7	2.7	2	21	733	752	732	753	0.93
15	19	0.0029	0.49	12.2	2.4	2	23	890	912	889	912	0.95
16	19	0.021	3.4	9.5	1.1	1	19	916	934	916	936	0.96
17	19	0.35	59	5.6	0.1	1	23	944	966	944	966	0.96
18	19	0.0021	0.35	12.6	0.0	1	23	974	996	974	996	0.98
19	19	0.11	18	7.2	1.8	1	23	1003	1025	1003	1025	0.95

Sequence Information

Coding Sequence: ATGAGCAGACTTTATTACCAGACTCCAACTAGAACTGATGCCTTGGGAACCGAAGGTGTTTCGTCGTGGACGGGGTCTGAGGGCCAAAGCTCACCTCCATCCTCCTGCGCGACGCCAAATTCGGCGACGGAGCTCGCGGATTCTGAGCTGGCATTCACCGTCGGCGTTACCGAGGCAACGCCTTACGCTTGCCAGTTCTGCGACAAAGCTTTCCCCCGCCTCAGTTACCTCAAGAAGCACGAGCAGACGCACAGCGATCATTTGCCGTTTATATGCGAGTTTTGCAAGAGGAGATTTAAGCACAAGAGGAGCAAAGACCGGCACCTCAAGCTCCATACCGGCGACAAAAGGTATAAATGCTCCCAATGCCAGGCTGCTTTCGCTCGGAGCGATCACCTCAAGATCCATATGAAGACACACGACAATCAGAAGCCTTTCCAGTGCACTGTATGCAACCGAGGATACAACACGGCTGCCGCCCTCACCTCGCACATGCAAAATCACAAGAAGTCCAGCGAGCCTGACTCATCACCATCCGGCAGTACGTTCAAATGCCTTGAGTGCTCCGAGGTTTTCGCCAAGCCTGAACTCCTGACGAATCACGTGATGATGGAACACCAAGGAAATTCCAGCAAAAGGAGGGTGTCGCCATCTCTGTCCAACCTTGGTTGTATGTACTGCACCAAAGACAATTTCAGTTCCGTGGAAGCTCTCCAACTCCACATCCAGGCGATGCATGGTTCCATTTTGAAAGGAAGCCATCGTTACGGATTTTCGAAAGGTTTATACCTTCCCAATGGATTGTCATCGTcagGTTATGCGTGTAGACTATGCACTATGGTATTCCCATCATCAGGAACTCTGCAAGCCCATGCAGCTGTAGCACATGGGATACAGGAGCAGGTGAGTAGCCTAGAGGAACACCAATGCCCACAGTGCAGCCTCAGTTTCCGCACTCTCAACTCCTTTGCTGAGCATTTTGTCCTCTCACATGGAGCATCGCCACCAGGGAAAGCAAAATCTGCTCCGGATCAAGTTCTTCCTACTGATCTCAGCGTCGTCCGCAAAGAGCAAAACGACAAGCCGCCAGCAGTCAAGAGAAGCCGAAGCAGTGCCCATTCCACTGATGCTCCAAGGAACAGTTCGCAGGTGGTGCAGTATGACCATCCAGGTATACTCCTCTGTAATCAATGCAACGCAGCTCTCCCAGATTTTGAGTCATTCAGGAGTCACCTCAAAAGCCACTTGGAGGAATCGACCTTCAGCCCTGCACCTCCTCCACCTTCGCGCCTTCCACAACTCAACATCTGCTCTTACTGTGGAGCCCACCTACCTTCATCGGACGAACTCACCAGGCATATAGGGGCCCATTTCCTTTCAACAGTCACTGAATACGGTTGCCAGAGCTGCTACCAACTTTTCCCAAAACCGGAGGATCTCCAGAAGCATCTACTTGACATTCACGCTCAGAACTGGTACCGATGCACCTTGTGCAAGGAGTTGTTCGAGTCCCAAGCAGCTATTCAAGTCCACTTTGCAGTTAAACATTGTAGTGAAACCAAACAATACAGATGTGCAGCATGCCCTAACGCTCCTTCACTCCACTCAGAATTGGAGTTTGGCCTTCACGTCAGGGCGGTTCACTGTACTTACAATCTATCGCCAAATCCTCCTGTGATTTCGTCACCTCGTCTTCATAGGTGCATATTCTGCAATCTGACATTCAGTTCAGATATTGAAATGCAGTTCCATCTGGCTGTACACACTAAACTTTTTCAATGCCCGATGTGCAATGAGGCATTTCATGTTGAGTATTTCCTGGAGAAACACATTCAACTATGTCATCCGAATCAGAATTCATCAGTGAGGCACATGTCCTACGAAAAGAAAATTCACGAAAATGAAAAACCAGTAAATGGGTTCCACTCTTCTCCGTCCACTCTGACCAACTATCATGTGAACAACAACACTAACACGAGCAATGCCACAGAGAATGTGAAAAGGCCTGAGATCAGCAGCCACCacacaaacaataataacaataacaataataacaacaatattaacaacaacaacaacccTATCGGGACCTGCGATATATGCGAAAGTGGCGAGTTCTCTTCAGAGGCTGAACTAAATGCTCATCGAAAACTCGTTCATCACCTCAAGACATCTACAGTGGCCAAGGTTAGCCTGCACTGTGCTTACTGCAAAGAGAGTTGCAAGTCACGTACCGAGCTGGAGAACCACATGAAGAGCTACTGCCAGGCTGCTATCGGGTCCAGCAAGCACAAATGCAACATTTGTGACGAACTGTGCCTTTCTGCAGCCATATTGGCAGAACATAAGCTAACTCATTGCAAGGTCGTTCATGGGTCGACCTGCACTCACTGCAAAGCACTGATCACAAACGAAGACACTTTCATCTCCCATTCAATTCAACATTCTAACTCAAGCGCTGGTAATTCCCAGCAGCTAGTTCTCCCCAATCCATGCGTCATTTGCCGTCAAACTCTCACCAGCGAGATGGAAACCCGACTCCACGCCAAGTTTCACCTCCAGATGGATGTTATCAAATGTTCGATATGTCTACAGAACTACGAGCGCACAGAGGTGGCCGATGGAGTCTGTAAATCTTGCCACAAACGGGCGAGATCGTCTCCTAGCATGTGCATGCATTGTCACATTCAGTTTGAATCTTCATCACAACTTGAACTGCACATGGCAAAAACTCATAAACAATCGTTCAAATGCAGTAAGTGTAAGGAAGTTTTCGAATCTGAAAAGGACTTTGAGAGCCACAGCTCTCATGTATGCGGAGGTGATATTTTCAAATGTCGCCTGTGCTTGCTGCTGTTCCCTGGGCCAACACAACTCCAATCTCATCTTATTGAGCACACATTCGCTGGGTGTCCAAACTACACCTGTTACATCTGCAGTGCGGTTTTCACCACTGCCCCTGGCCTTCAAGGTCACATCATGGAGCACGGCCTTTCGGCGAAGCCCTATGACTGCTCGAAATGCTCCCAGAATTTCTTCTTCCGCGCCGAATTGGAGAATCATTCATTCATGCATTTAGAGACTTCTTACCAGTCGACAGACAAATGTGGAATCAAGCACTTCGCGGACAGTCACAGCAGCTTGATAAATACAGAAGCTGATGAGAATGGTATTGGAAGTAATCATGAAGCCACAAAACCTCTTCAAAACGGCCTAAACTTGATCAAGCACTCACATGTCCAATTGACCAGCGGCTCGTCAAGTGAGACCAAAGGCAGTTTGAGTGAGGACGGACCAAATTGCAGCATTTCTGAACGTTCCGGTCGACCTGACGCAATTGGCATCAAAATGGAAGCTGTTCACTCTGAAAACAAGTCAGACACTCGGGATCATGTGATGGTTAAGATATTTGAGAGGCATTTTTACTTCAATCACAGGCACACCTTCAAATTCACAACTAAGCTGCTGCCTCCAACAAAGAAGACAGCATTTGGCATATGGGAAGGACACTGCCATCAAGTCAATGATTGCTTCCTTCAAATATCATGGGGTTTGGATACTCTTAACATTCGGTTCTGCTACGTGTATTTATTGGTTGGCTTAGTAGTTGTTTGCCAAACTGCTTTCTTCATCTAcctatactcgtacatatctcgagttgaaaaattgatgacGGACAATTTTTCTACAACTGGTGAGACGTATAGGGTGAAAAGAGAGACGCCCGAACTGGACAACACCGTGTCAAAAGCGGGAGTTGAGTTCATCAATCCGATTTTgcgagaaaaaattgaagaggAAGATGTCAGAAAGAACTCGACCGAAAATTGGGTGTGGCTGACGTCTTACTCAAGAATACCGTTGTTGGCCATTCAAGGGTTCTGTCAAGCTTCAAAGGAGTATTGCCCTGAGGGCAAAGAAGGTCCTCAAGGGCCAAGAGGCATCCAAGGTGACAAAGGTGATCGAGGCAGCCCTGGGGAAAAAGGAGAGCGCGGATCCAAAGGTGATCCCGGTCCCCGAGGACCGACTGGACCCCCTGGAGATACTGGGCCCAGAGGACCTAAAGGCGATCCTGGGCCGATCGGCGGTCCAGGACTCGACGGTCGGGATGGGATCCCGGGGGAACCAGGGTTAGATGGGATCGATGGGCGAAACGGAGCTGACGGAATTCCAGGGGAGCCAGGATATCCCGGCAAAGACGGCATCCCCGGAACTCCTGGCACGAATGGAACAGATGGAATTCCAGGGCACTTGGGGCCACCAGGACCTACAGGGCCTATGGGCTCAAAAGGTCTGTCTGGCCCTAGAGGAAGGACTGGTAAACCAGGTACAAATGGCATACCAGGGACTCCTGGTATTCAGGCTTGGGCTATTACCGTCAACGGTTCAACTACTAGTGAGCTCCTAATTCCTCCTTCGATAGTTGGTTCTGAGAGTTTGTTCCATTCTGGACCGATAGTGCTGAGAGAAGGAGAAAACGTTAGGATGAAATGTGCAGCGACCGGACATCCGAGGCCGCTCATCCAGTGGCGGATGATGGAGAAAACTGCCATAGGACTTGGGAAATGGCGAGAAACATCGGTGCAAGGAGCGTCATTCAACATTACTCGAGTAACACGTGACCATATGGGAACTTACATGTGTATCGCTTCCAACGGGATTCCTCCTCCAGCCAACCAGTCCTTCGTATTAGATGTTCAATTCCCACCAACCATCAGAGTGAAAAACCAGTACGTTACATACCGGAATAATTCTGACGCATCCCTAACGTGCGAAGTTGAAGCATATCCTGAAGCAGTGAAATACTGGGAAAAAGAAGACGGAAGACTGGTAGAACCTTCAGAGAAATATGCAATCAACACCATTGAAGTGGATAGATACAGAGCGATTATGATCCTAAATGTATCGAATGTCAATTTCAACGACTCCGGGGATTACAACTGCATCGCGAAAAATGAACTAGACACCACGAAAGGGATCATTTCTCTTGTTGAATACAGGCATGGCGCGATTTATCAAGGCAAGGGAAAAGTGTTTGGAAAAGACGTCCCGGAGAGAGTTGACATTGACGATCTCTGTCCGGCACATATCCCCTGCCAAGAATGTCCAGATCCAAAAGAATTCAAATGTAAAACTGGGTTTTACTCCTATGAGCTGTTGGGAGGAGAAAAGCTGAAGGCCGTTCCACTTGAAAGTAACCACACATATCCTGGTCTTCCTAACAGAACGCTAGAGTGCCAGGTGTACGCCGTCGGAAAGCCCGTTTTCCTGAAAACCACGGAATCGAGCTACGGGAGCTGGATGAGAGATCCTCTGCAAAAAACAGAACCTGAGAAATACTGGATGACGCGAGCAGAGGCTAATACGATCCTGTACGAGTACAGCAATAAAACAGCGTATAGGAACAACACCCCAAGTAAATCTTACACATTGGAGCACCCATTCAGCGGTAACGCTCACACAGTgtacaacggttcatttttcTACAACCAGGCCAACAAGCCGATAATAGTGAAATACGAACTCAGCTCCACGAGGAGCCAAGTTCTTCCAGTGCCCTTCGCCATAATCAATGACACAAACCATCTCTACCAGTCGGACAACAACTACATGGATTTCTCTGCAGATGACAACGGCCTCTGGGTCATCTACGGACTCCCTGGATCGAACAACACGGCTGTCCTTAAACTTGACGCGTATGCTTTGGAAATACAGTACGCGCTCAACATCAGTGTTAAGCACAACAAAGCAGGAGAGATGTTCATCGTATGCGGAGTATTGTACGTTGTGGAAAGCGCTATTGATCGTCGAACCAACATCAGGTTCGCTTTTGATTTGTATAAGTTGGAACCATTACTCGACGTTAGCGTGGAATTCACCAATCCGTTCCGTAAAACAACCATGCTGGCTTACAACCACAGGAATAAGGAACTGTTTACTTGGGATAGAGGTAACCAGCTCACTTATCCCATTAGATACCACGAAATTGGCTACAACCTCACCAAAGAAGATAAAGGAGAACCTGAAACCAATTATTTGATATCGGGCTACGAAGTTTATGAATGA
Protein Sequence: MSRLYYQTPTRTDALGTEGVSSWTGSEGQSSPPSSCATPNSATELADSELAFTVGVTEATPYACQFCDKAFPRLSYLKKHEQTHSDHLPFICEFCKRRFKHKRSKDRHLKLHTGDKRYKCSQCQAAFARSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKSSEPDSSPSGSTFKCLECSEVFAKPELLTNHVMMEHQGNSSKRRVSPSLSNLGCMYCTKDNFSSVEALQLHIQAMHGSILKGSHRYGFSKGLYLPNGLSSSGYACRLCTMVFPSSGTLQAHAAVAHGIQEQVSSLEEHQCPQCSLSFRTLNSFAEHFVLSHGASPPGKAKSAPDQVLPTDLSVVRKEQNDKPPAVKRSRSSAHSTDAPRNSSQVVQYDHPGILLCNQCNAALPDFESFRSHLKSHLEESTFSPAPPPPSRLPQLNICSYCGAHLPSSDELTRHIGAHFLSTVTEYGCQSCYQLFPKPEDLQKHLLDIHAQNWYRCTLCKELFESQAAIQVHFAVKHCSETKQYRCAACPNAPSLHSELEFGLHVRAVHCTYNLSPNPPVISSPRLHRCIFCNLTFSSDIEMQFHLAVHTKLFQCPMCNEAFHVEYFLEKHIQLCHPNQNSSVRHMSYEKKIHENEKPVNGFHSSPSTLTNYHVNNNTNTSNATENVKRPEISSHHTNNNNNNNNNNNINNNNNPIGTCDICESGEFSSEAELNAHRKLVHHLKTSTVAKVSLHCAYCKESCKSRTELENHMKSYCQAAIGSSKHKCNICDELCLSAAILAEHKLTHCKVVHGSTCTHCKALITNEDTFISHSIQHSNSSAGNSQQLVLPNPCVICRQTLTSEMETRLHAKFHLQMDVIKCSICLQNYERTEVADGVCKSCHKRARSSPSMCMHCHIQFESSSQLELHMAKTHKQSFKCSKCKEVFESEKDFESHSSHVCGGDIFKCRLCLLLFPGPTQLQSHLIEHTFAGCPNYTCYICSAVFTTAPGLQGHIMEHGLSAKPYDCSKCSQNFFFRAELENHSFMHLETSYQSTDKCGIKHFADSHSSLINTEADENGIGSNHEATKPLQNGLNLIKHSHVQLTSGSSSETKGSLSEDGPNCSISERSGRPDAIGIKMEAVHSENKSDTRDHVMVKIFERHFYFNHRHTFKFTTKLLPPTKKTAFGIWEGHCHQVNDCFLQISWGLDTLNIRFCYVYLLVGLVVVCQTAFFIYLYSYISRVEKLMTDNFSTTGETYRVKRETPELDNTVSKAGVEFINPILREKIEEEDVRKNSTENWVWLTSYSRIPLLAIQGFCQASKEYCPEGKEGPQGPRGIQGDKGDRGSPGEKGERGSKGDPGPRGPTGPPGDTGPRGPKGDPGPIGGPGLDGRDGIPGEPGLDGIDGRNGADGIPGEPGYPGKDGIPGTPGTNGTDGIPGHLGPPGPTGPMGSKGLSGPRGRTGKPGTNGIPGTPGIQAWAITVNGSTTSELLIPPSIVGSESLFHSGPIVLREGENVRMKCAATGHPRPLIQWRMMEKTAIGLGKWRETSVQGASFNITRVTRDHMGTYMCIASNGIPPPANQSFVLDVQFPPTIRVKNQYVTYRNNSDASLTCEVEAYPEAVKYWEKEDGRLVEPSEKYAINTIEVDRYRAIMILNVSNVNFNDSGDYNCIAKNELDTTKGIISLVEYRHGAIYQGKGKVFGKDVPERVDIDDLCPAHIPCQECPDPKEFKCKTGFYSYELLGGEKLKAVPLESNHTYPGLPNRTLECQVYAVGKPVFLKTTESSYGSWMRDPLQKTEPEKYWMTRAEANTILYEYSNKTAYRNNTPSKSYTLEHPFSGNAHTVYNGSFFYNQANKPIIVKYELSSTRSQVLPVPFAIINDTNHLYQSDNNYMDFSADDNGLWVIYGLPGSNNTAVLKLDAYALEIQYALNISVKHNKAGEMFIVCGVLYVVESAIDRRTNIRFAFDLYKLEPLLDVSVEFTNPFRKTTMLAYNHRNKELFTWDRGNQLTYPIRYHEIGYNLTKEDKGEPETNYLISGYEVYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00145877;
90% Identity: -
80% Identity: -